Homologs of RR42_RS04415 from Cupriavidus basilensis FW507-4G11

ABC transporter
SEED: ABC transporter, transmembrane region:ABC transporter related
KEGG: ATP-binding cassette, subfamily B, bacterial

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS04415 ABC transporter strong 100 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS17375 ABC transporter ATP-binding protein insig. 86 99
o Herbaspirillum seropedicae SmR1 HSERO_RS10850 ABC transporter strong 81 98
o Dechlorosoma suillum PS Dsui_2752 ABC-type multidrug transport system, ATPase and permease component insig. 73 95
o Variovorax sp. OAS795 ABID97_RS06905 ABC transporter ATP-binding protein cofit 72 99
o Acidovorax sp. GW101-3H11 Ac3H11_4059 Lipid A export ATP-binding/permease protein MsbA strong 74 96
o Castellaniella sp019104865 MT123 ABCV34_RS13160 ABC transporter ATP-binding protein strong 71 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3526 Lipid A export ATP-binding/permease protein MsbA cofit 75 89
o Variovorax sp. SCN45 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 cofit 75 87
  Synechococcus elongatus PCC 7942 Synpcc7942_0082 mdlB ATPase no data 37 75
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21145 ABC transporter ATP-binding protein cofit 36 75
  Synechococcus elongatus PCC 7942 Synpcc7942_2109 ATPase sig. 37 75
  Pseudomonas aeruginosa PA14 IKLFDK_28550 lipid A export permease/ATP-binding protein MsbA no data 38 75
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2934 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain insig. 36 74
  Cellulophaga baltica 18 M666_RS18225 ABC transporter ATP-binding protein no data 33 75
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1727 ABC-type multidrug transport system, ATPase and permease components strong 34 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17735 antibiotic ABC transporter ATP-binding protein cofit 34 76
  Pseudomonas stutzeri RCH2 Psest_0467 lipid A export permease/ATP-binding protein MsbA no data 41 65
  Agrobacterium fabrum C58 Atu1738 ABC transporter, nucleotide binding/ATPase protein insig. 35 75
  Bacteroides stercoris CC31F HMPREF1181_RS02515 ABC transporter ATP-binding protein no data 36 75
  Rhizobium sp. OAE497 ABIE40_RS19850 ABC transporter ATP-binding protein insig. 35 75
  Bifidobacterium breve UCC2003 BBR_RS19845 ABC transporter ATP-binding protein cofit 33 76
  Synechocystis sp000284455 PCC 6803 SGL_RS07030 ABC transporter ATP-binding protein no data 39 68
  Pseudomonas sp. S08-1 OH686_09600 lipid A export permease/ATP-binding protein MsbA no data 40 65
  Pseudomonas fluorescens FW300-N2C3 AO356_08865 lipid transporter ATP-binding/permease no data 39 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1459 Lipid A export ATP-binding/permease protein MsbA no data 37 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS24460 lipid A export permease/ATP-binding protein MsbA no data 36 77
  Pseudomonas putida KT2440 PP_4935 Lipid A export ATP-binding/permease protein MsbA no data 39 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_196 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) no data 38 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12740 multidrug ABC transporter ATP-binding protein no data 35 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21985 type I secretion system permease/ATPase insig. 38 74
  Ralstonia solanacearum UW163 UW163_RS22515 type I secretion system permease/ATPase insig. 38 74
  Mycobacterium tuberculosis H37Rv Rv1272c Probable drugs-transport transmembrane ATP-binding protein ABC transporter strong 40 65
  Ralstonia solanacearum GMI1000 RS_RS18565 type I secretion system permease/ATPase insig. 38 74
  Cellulophaga baltica 18 M666_RS02890 ABC transporter ATP-binding protein insig. 35 74
  Ralstonia solanacearum PSI07 RPSI07_RS01230 type I secretion system permease/ATPase insig. 38 74
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1191 ABC-type multidrug transport system, ATPase and permease components no data 35 74
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3657 Lipid A export ATP-binding/permease protein MsbA no data 36 76
  Cellulophaga baltica 18 M666_RS00295 ABC transporter ATP-binding protein insig. 34 75
  Fusobacterium nucleatum SB010 HUW76_07145 ABC transporter ATP-binding protein no data 33 74
  Pseudomonas sp. RS175 PFR28_05080 Lipid A export ATP-binding/permease protein MsbA no data 38 78
  Pseudomonas sp. DMC3 GFF3174 Lipid A export ATP-binding/permease protein MsbA no data 38 77
  Synechocystis sp000284455 PCC 6803 SGL_RS05425 ABC transporter ATP-binding protein insig. 35 75
  Pseudomonas sp. BP01 JOY50_RS10020 msbA lipid A export permease/ATP-binding protein MsbA no data 38 78
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15575 antibiotic ABC transporter ATP-binding protein strong 35 76
  Pseudomonas sp. SVBP6 COO64_RS05180 ABC transporter transmembrane domain-containing protein insig. 35 76
  Pseudomonas sp. SVBP6 COO64_RS17710 msbA lipid A export permease/ATP-binding protein MsbA no data 38 78
  Pseudomonas syringae pv. syringae B728a Psyr_3076 Type I secretion system ATPase, HlyB insig. 36 75
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3076 Type I secretion system ATPase, HlyB insig. 36 75
  Marinobacter adhaerens HP15 HP15_840 ABC transporter, transmembrane region: ABC transporter insig. 34 76
  Marinobacter adhaerens HP15 HP15_2064 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA no data 36 76
  Pectobacterium carotovorum WPP14 HER17_RS11475 ABC transporter ATP-binding protein/permease insig. 34 76
  Fusobacterium nucleatum SB010 HUW76_06745 ABC transporter ATP-binding protein insig. 34 75
  Pseudomonas putida KT2440 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB insig. 38 75
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22795 antibiotic ABC transporter ATP-binding protein no data 36 63
  Pseudomonas syringae pv. syringae B728a Psyr_0536 ABC transporter, transmembrane region:ABC transporter no data 40 75
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0536 ABC transporter, transmembrane region:ABC transporter no data 40 75
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00698 Lipid A export ATP-binding/permease protein MsbA no data 38 78
  Magnetospirillum magneticum AMB-1 AMB_RS20685 lipid A export permease/ATP-binding protein MsbA no data 35 76
  Pseudomonas fluorescens FW300-N2E3 AO353_12955 lipid transporter ATP-binding/permease no data 37 77
  Pseudomonas fluorescens SBW25 PFLU_RS02380 lipid A export permease/ATP-binding protein MsbA no data 38 76
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02380 lipid A export permease/ATP-binding protein MsbA no data 38 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17755 ABC transporter strong 35 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01641 Lipid A export ATP-binding/permease protein MsbA insig. 36 74
  Pseudomonas simiae WCS417 PS417_02300 lipid transporter ATP-binding/permease no data 38 76
  Escherichia coli ECOR38 HEPCGN_06890 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 35 75
  Kangiella aquimarina DSM 16071 B158DRAFT_1598 lipid A export permease/ATP-binding protein MsbA no data 35 67
  Burkholderia phytofirmans PsJN BPHYT_RS06180 ATP-binding protein no data 35 76
  Bacteroides ovatus ATCC 8483 BACOVA_01923 ABC transporter, ATP-binding protein no data 35 68
  Rhizobium sp. OAE497 ABIE40_RS25705 ABC transporter ATP-binding protein insig. 38 63
  Escherichia coli ECRC62 BNILDI_22625 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein cofit 35 75
  Bacteroides thetaiotaomicron VPI-5482 BT3386 ABC transporter, ATP-binding protein (NCBI ptt file) no data 34 75
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1396 cyclolysin secretion ATP-binding protein insig. 36 75
  Escherichia coli BL21 ECD_00400 putative multidrug ABC transporter ATPase insig. 36 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00314 ATP-binding cassette, subfamily B, MsbA no data 33 79
  Escherichia coli ECOR27 NOLOHH_01210 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein cofit 35 75
  Escherichia fergusonii Becca EFB2_03609 putative multidrug resistance ABC transporter ATP-binding/permease protein YheI insig. 35 75
  Escherichia coli Nissle 1917 ECOLIN_RS02685 SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 35 75
  Rahnella sp. WP5 EX31_RS09280 ABC transporter ATP-binding protein insig. 34 75
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1737 ABC-type multidrug transport system, ATPase and permease components insig. 37 65
  Shewanella amazonensis SB2B Sama_1337 ABC transporter, ATP-binding protein MsbA (RefSeq) no data 37 65
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17210 ABC transporter ATP-binding protein no data 38 63
  Escherichia coli BW25113 b0448 mdlA fused predicted multidrug transporter subunits of ABC superfamily: ATP-binding components (NCBI) strong 35 75
  Escherichia coli ECRC100 OKFHMN_08275 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 35 75
  Escherichia coli ECRC101 MCAODC_27500 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 35 75
  Escherichia coli ECRC102 NIAGMN_06330 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein cofit 35 75
  Escherichia coli ECRC98 JDDGAC_11930 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein insig. 35 75
  Escherichia coli ECRC99 KEDOAH_19690 mdlA SmdA family multidrug ABC transporter permease/ATP-binding protein no data 35 75
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03225 putative multidrug resistance ABC transporter ATP-binding/permease protein YheI insig. 35 75
  Phocaeicola dorei CL03T12C01 ABI39_RS06190 ABC transporter ATP-binding protein no data 34 67
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10880 ABC transporter ATP-binding protein no data 34 67
  Synechocystis sp000284455 PCC 6803 SGL_RS10630 peptidase domain-containing ABC transporter cofit 34 77
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13260 ABC transporter strong 32 75
  Acinetobacter baumannii LAC-4 RR41_RS12050 lipid A export permease/ATP-binding protein MsbA no data 39 64
  Pseudomonas fluorescens SBW25 PFLU_RS07625 ABC transporter ATP-binding protein/permease insig. 36 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07625 ABC transporter ATP-binding protein/permease insig. 36 74
  Herbaspirillum seropedicae SmR1 HSERO_RS14455 peptidase C39 insig. 36 74
  Shewanella loihica PV-4 Shew_1638 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) no data 35 72
  Paraburkholderia graminis OAS925 ABIE53_001444 subfamily B ATP-binding cassette protein MsbA no data 34 79
  Synechococcus elongatus PCC 7942 Synpcc7942_1905 hlyB cyclic nucleotide-binding domain (cNMP-BD) protein sig. 35 75