Homologs of Pf1N1B4_1963 from Pseudomonas fluorescens FW300-N1B4

O-antigen export system permease protein RfbD
SEED: O-antigen export system permease protein RfbD
KEGG: lipopolysaccharide transport system permease protein

77 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1963 O-antigen export system permease protein RfbD sig. 100 100
o Pseudomonas fluorescens FW300-N2E3 AO353_10255 ABC transporter sig. 94 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2336 O-antigen export system permease protein RfbD sig. 85 100
o Pseudomonas fluorescens FW300-N2C3 AO356_11825 ABC transporter strong 83 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4240 O-antigen export system permease protein RfbD insig. 83 100
o Pseudomonas sp. RS175 PFR28_04556 hypothetical protein sig. 82 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01668 hypothetical protein strong 56 98
o Pseudomonas sp. S08-1 OH686_11970 O-antigen export system permease protein RfbD strong 63 100
o Pseudomonas syringae pv. syringae B728a Psyr_0917 ABC-2 strong 44 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0917 ABC-2 strong 44 100
o Pseudomonas putida KT2440 PP_1778 Lipopolysaccharide ABC export system, permease protein strong 41 98
o Rhodanobacter sp. FW510-T8 OKGIIK_01190 Transport permease protein cofit 42 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4513.1 O-antigen export system permease protein RfbD no data 41 99
o Azospirillum brasilense Sp245 AZOBR_RS33925 ABC transporter strong 42 97
o Magnetospirillum magneticum AMB-1 AMB_RS05435 ABC transporter permease cofit 36 84
o Klebsiella michiganensis M5al BWI76_RS18990 ABC transporter permease cofit 32 89
  Paraburkholderia graminis OAS925 ABIE53_001154 lipopolysaccharide transport system permease protein strong 34 97
  Bosea sp. OAE506 ABIE41_RS03025 ABC transporter permease no data 33 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_337 O-antigen export system permease protein RfbD strong 34 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_209 O-antigen export system permease protein RfbD insig. 33 92
  Pseudomonas fluorescens FW300-N2C3 AO356_00760 sugar ABC transporter permease insig. 33 92
  Pantoea sp. MT58 IAI47_07010 ABC transporter permease cofit 33 99
o Serratia liquefaciens MT49 IAI46_08125 ABC transporter permease no data 31 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS25730 ABC transporter permease strong 31 99
  Azospirillum sp. SherDot2 MPMX19_06721 hypothetical protein no data 33 86
  Pseudomonas simiae WCS417 PS417_20640 sugar ABC transporter permease no data 32 95
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2592 ABC-type polysaccharide/polyol phosphate export systems, permease component insig. 30 95
  Rahnella sp. WP5 EX31_RS11480 ABC transporter permease cofit 32 95
  Paraburkholderia graminis OAS925 ABIE53_001145 lipopolysaccharide transport system permease protein strong 31 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04827 lipopolysaccharide transport system permease protein no data 31 99
  Rhodanobacter denitrificans MT42 LRK55_RS05405 ABC transporter permease strong 34 80
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18750 ABC transporter permease no data 33 99
  Pseudomonas fluorescens FW300-N2E3 AO353_02005 hypothetical protein insig. 33 98
  Synechococcus elongatus PCC 7942 Synpcc7942_1126 ABC transporter permease protein strong 36 79
  Acidovorax sp. GW101-3H11 Ac3H11_1901 ABC transporter permease protein no data 34 78
  Burkholderia phytofirmans PsJN BPHYT_RS04295 ABC transporter insig. 32 85
  Desulfovibrio vulgaris Hildenborough JW710 DVUA0077 ABC transporter, permease protein (TIGR) no data 29 99
o Desulfovibrio vulgaris Miyazaki F DvMF_2701 ABC-2 type transporter (RefSeq) no data 27 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05655 ABC transporter permease cofit 28 99
  Phocaeicola dorei CL03T12C01 ABI39_RS13680 ABC transporter permease insig. 29 92
  Burkholderia phytofirmans PsJN BPHYT_RS21440 sugar ABC transporter permease insig. 28 84
  Pseudomonas syringae pv. syringae B728a Psyr_0610 ABC-2 insig. 30 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0610 ABC-2 insig. 30 96
  Lysobacter sp. OAE881 ABIE51_RS04300 ABC transporter permease no data 30 88
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1845 O-antigen export system, permease protein strong 26 97
  Phocaeicola dorei CL03T12C01 ABI39_RS20530 ABC transporter permease insig. 28 83
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06735 ABC transporter permease strong 28 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17700 ABC transporter permease strong 24 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01800 ABC transporter permease cofit 23 98
  Rhodospirillum rubrum S1H Rru_B0027 ABC-2 (NCBI) no data 29 77
o Castellaniella sp019104865 MT123 ABCV34_RS12950 ABC transporter permease insig. 26 98
  Bifidobacterium breve UCC2003 BBR_RS19765 ABC transporter permease no data 29 77
o Mycobacterium tuberculosis H37Rv Rv3783 Probable O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD no data 25 89
  Caulobacter crescentus NA1000 CCNA_00671 ABC-type polysaccharide/polyol phosphate export system, permease component no data 25 73
  Caulobacter crescentus NA1000 Δfur CCNA_00671 ABC-type polysaccharide/polyol phosphate export system, permease component cofit 25 73
  Rahnella sp. WP5 EX31_RS18920 ABC transporter permease insig. 24 92
  Burkholderia phytofirmans PsJN BPHYT_RS33205 ABC transporter no data 25 74
  Escherichia coli BL21 ECD_02828 Polysialic acid transport protein kpsM cofit 25 92
  Escherichia fergusonii Becca EFB2_00855 Polysialic acid transport protein KpsM insig. 25 92
  Escherichia coli Nissle 1917 ECOLIN_RS17035 ABC transporter permease no data 25 92
o Erwinia tracheiphila SCR3 LU632_RS08880 ABC transporter permease cofit 24 89
  Escherichia coli ECOR38 HEPCGN_18100 kpsM Polysialic acid transport protein strong 25 92
  Variovorax sp. OAS795 ABID97_RS05720 ABC transporter permease no data 26 73
  Azospirillum brasilense Sp245 AZOBR_RS33470 sugar ABC transporter permease strong 26 90
  Dinoroseobacter shibae DFL-12 Dshi_4148 ABC-2 type transporter (RefSeq) strong 24 92
  Pseudomonas sp. S08-1 OH686_00520 hypothetical protein insig. 24 79
  Vibrio cholerae E7946 ATCC 55056 CSW01_01295 ABC transporter permease strong 24 75
  Variovorax sp. SCN45 GFF4630 O-antigen export system permease protein RfbD no data 28 72
  Dickeya dianthicola 67-19 HGI48_RS18600 ABC transporter permease strong 25 73
  Dickeya dadantii 3937 DDA3937_RS18670 ABC transporter permease strong 23 86
  Dickeya dianthicola ME23 DZA65_RS19735 ABC transporter permease strong 24 73
  Phaeobacter inhibens DSM 17395 PGA1_65p00420 putative ABC type transporter strong 25 89
  Sinorhizobium meliloti 1021 SM_b20833 cell surface polysaccharide export ABC-2 transporter permease, close relative of Y20822wzm2 insig. 22 81
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4626 O-antigen export system permease protein RfbD no data 20 71
  Magnetospirillum magneticum AMB-1 AMB_RS05475 hypothetical protein cofit 30 73
  Phaeobacter inhibens DSM 17395 PGA1_c02840 inner membrane transport permease insig. 25 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1318 ABC-type multidrug transport system, permease component cofit 24 70