Homologs of PP_2177 from Pseudomonas putida KT2440

putative transcriptional regulator
SEED: Transcriptional regulator, MerR family

179 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2177 putative transcriptional regulator sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS12850 helix-turn-helix domain-containing protein no data 96 100
  Pseudomonas sp. BP01 JOY50_RS12830 helix-turn-helix domain-containing protein insig. 82 100
  Pseudomonas putida KT2440 PP_2181 Transcriptional regulator, Cro/CI family strong 81 100
  Pseudomonas sp. SVBP6 COO64_RS08790 helix-turn-helix domain-containing protein insig. 74 99
  Pseudomonas sp. S08-1 OH686_12460 Transcriptional regulator, MerR family cofit 72 99
  Pseudomonas segetis P6 ACVTMO_RS17935 helix-turn-helix domain-containing protein insig. 68 99
  Pseudomonas fluorescens FW300-N2E3 AO353_27480 Cro/Cl family transcriptional regulator insig. 68 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3805 Transcriptional regulator, MerR family sig. 66 100
o Pseudomonas orientalis W4I3 QF045_RS12555 XRE family transcriptional regulator cofit 66 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02211 HTH-type transcriptional regulator SutR cofit 64 100
o Pseudomonas simiae WCS417 PS417_10585 Cro/Cl family transcriptional regulator insig. 64 100
o Pseudomonas fluorescens SBW25 PFLU_RS10645 helix-turn-helix domain-containing protein insig. 64 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS10645 helix-turn-helix domain-containing protein sig. 64 100
  Pseudomonas aeruginosa PA14 IKLFDK_22750 Cro/Cl family transcriptional regulator sig. 52 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS36645 XRE family transcriptional regulator strong 52 99
  Pseudomonas aeruginosa MRSN321 DY961_RS22695 XRE family transcriptional regulator strong 52 99
  Pseudomonas aeruginosa MRSN321 DY961_RS10735 cupin domain-containing protein insig. 34 96
  Pseudomonas aeruginosa PA14 IKLFDK_28600 Cro/Cl family transcriptional regulator insig. 34 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS51325 cupin domain-containing protein insig. 34 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3219 Transcriptional regulator, Cro/CI family insig. 32 96
  Pseudomonas sp. SVBP6 COO64_RS21060 helix-turn-helix domain-containing protein insig. 32 94
  Pseudomonas fluorescens FW300-N2E3 AO353_24790 Cro/Cl family transcriptional regulator sig. 32 96
  Pseudomonas putida KT2440 PP_2868 Transcriptional regulator, Cro/CI family strong 32 94
  Pseudomonas sp. BP01 JOY50_RS05765 helix-turn-helix domain-containing protein no data 31 94
  Bosea sp. OAE506 ABIE41_RS10690 XRE family transcriptional regulator insig. 34 85
  Phaeobacter inhibens DSM 17395 PGA1_c33160 putative helix-turn-helix protein insig. 33 91
  Phaeobacter inhibens DSM 17395 PGA1_c28440 putative transcriptional regulator insig. 35 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS18365 cupin domain-containing protein strong 31 95
  Shewanella loihica PV-4 Shew_0970 XRE family transcriptional regulator (RefSeq) strong 25 89
  Fusobacterium nucleatum SB010 HUW76_01135 cupin domain-containing protein strong 26 90
  Pseudomonas putida KT2440 PP_2884 XRE family transcriptional regulator strong 28 85
  Pseudomonas sp. BP01 JOY50_RS05840 cupin domain-containing protein insig. 27 89
  Burkholderia phytofirmans PsJN BPHYT_RS07145 DNA-binding protein insig. 27 92
  Pseudomonas fluorescens FW300-N2C3 AO356_06745 DNA-binding protein sig. 26 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3201 Transcriptional regulator, MerR family strong 26 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03130 transcriptional regulator, XRE family with cupin sensor insig. 29 98
  Paraburkholderia graminis OAS925 ABIE53_004168 transcriptional regulator with XRE-family HTH domain strong 28 98
  Azospirillum sp. SherDot2 MPMX19_02581 HTH-type transcriptional regulator SutR insig. 29 97
  Pseudomonas sp. SVBP6 COO64_RS01380 cupin domain-containing protein insig. 28 91
  Shewanella sp. ANA-3 Shewana3_3100 XRE family transcriptional regulator (RefSeq) strong 26 91
  Shewanella amazonensis SB2B Sama_2646 XRE family transcriptional regulator (RefSeq) strong 23 89
  Burkholderia phytofirmans PsJN BPHYT_RS22055 DNA-binding protein strong 28 92
  Rhodospirillum rubrum S1H Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 28 86
  Pseudomonas sp. SVBP6 COO64_RS10815 cupin domain-containing protein insig. 27 89
  Shewanella oneidensis MR-1 SO1265 transcriptional regulator, putative (NCBI ptt file) strong 25 91
  Pseudomonas fluorescens FW300-N2E3 AO353_09140 XRE family transcriptional regulator strong 25 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2147 Putrescine utilization regulator strong 27 91
  Ralstonia solanacearum GMI1000 RS_RS05775 XRE family transcriptional regulator insig. 27 95
  Fusobacterium nucleatum SB010 HUW76_07320 helix-turn-helix domain-containing protein strong 22 97
  Enterobacter sp. TBS_079 MPMX20_03983 hypothetical protein insig. 43 36
  Pseudomonas sp. RS175 PFR28_00271 hypothetical protein strong 25 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS06145 XRE family transcriptional regulator insig. 31 98
  Klebsiella michiganensis M5al BWI76_RS13955 hypothetical protein insig. 29 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS33370 XRE family transcriptional regulator insig. 27 88
  Pseudomonas syringae pv. syringae B728a Psyr_0238 Helix-turn-helix motif protein insig. 26 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0238 Helix-turn-helix motif protein insig. 26 91
  Pseudomonas segetis P6 ACVTMO_RS00025 cupin domain-containing protein strong 21 93
  Pseudomonas fluorescens FW300-N2C3 AO356_12635 XRE family transcriptional regulator strong 26 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4394 Putrescine utilization regulator strong 26 91
  Pseudomonas sp. S08-1 OH686_13700 Putrescine utilization regulator strong 22 93
  Pseudomonas orientalis W4I3 QF045_RS02040 cupin domain-containing protein cofit 25 91
  Enterobacter asburiae PDN3 EX28DRAFT_3141 transcriptional regulator, XRE family with cupin sensor insig. 41 35
  Pseudomonas sp. RS175 PFR28_04396 HTH-type transcriptional regulator PuuR strong 25 91
  Pseudomonas sp. DMC3 GFF387 HTH-type transcriptional regulator PuuR cofit 24 91
  Acidovorax sp. GW101-3H11 Ac3H11_1308 Transcriptional regulator no data 29 98
  Pseudomonas fluorescens SBW25 PFLU_RS29365 cupin domain-containing protein cofit 25 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29365 cupin domain-containing protein strong 25 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00005 HTH-type transcriptional regulator PuuR cofit 25 91
  Pseudomonas simiae WCS417 PS417_27690 XRE family transcriptional regulator strong 25 91
  Ralstonia solanacearum GMI1000 RS_RS21755 XRE family transcriptional regulator sig. 33 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14960 XRE family transcriptional regulator insig. 27 95
  Ralstonia solanacearum UW163 UW163_RS12430 XRE family transcriptional regulator no data 27 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_815 Putrescine utilization regulator strong 26 91
  Pseudomonas putida KT2440 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine strong 22 91
  Escherichia coli ECRC100 OKFHMN_28185 hipB transcriptional regulator no data 30 88
  Escherichia coli ECRC101 MCAODC_21985 hipB transcriptional regulator insig. 30 88
  Escherichia coli ECRC102 NIAGMN_28035 hipB transcriptional regulator no data 30 88
  Escherichia coli ECRC98 JDDGAC_06315 hipB transcriptional regulator sig. 30 88
  Escherichia coli ECRC99 KEDOAH_25120 hipB transcriptional regulator no data 30 88
  Ralstonia solanacearum GMI1000 RS_RS23520 XRE family transcriptional regulator no data 26 89
  Ralstonia solanacearum GMI1000 RS_RS23650 XRE family transcriptional regulator no data 26 89
  Pseudomonas aeruginosa MRSN321 DY961_RS12395 cupin domain-containing protein strong 24 91
  Pseudomonas aeruginosa PA14 IKLFDK_26945 XRE family transcriptional regulator strong 24 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS49735 cupin domain-containing protein strong 24 91
  Cupriavidus basilensis FW507-4G11 RR42_RS00225 XRE family transcriptional regulator insig. 26 95
  Agrobacterium fabrum C58 Atu3328 aldehyde dehydrogenase strong 24 85
  Pseudomonas stutzeri RCH2 Psest_3791 Predicted transcriptional regulators insig. 22 93
  Azospirillum brasilense Sp245 AZOBR_RS27045 XRE family transcriptional regulator insig. 28 95
  Enterobacter asburiae PDN3 EX28DRAFT_1223 Cupin domain/Helix-turn-helix insig. 26 91
  Serratia liquefaciens MT49 IAI46_11440 helix-turn-helix transcriptional regulator cofit 27 96
  Variovorax sp. OAS795 ABID97_RS13245 XRE family transcriptional regulator insig. 25 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07555 helix-turn-helix domain-containing protein cofit 37 35
  Variovorax sp. OAS795 ABID97_RS06760 XRE family transcriptional regulator insig. 29 92
  Rhizobium sp. OAE497 ABIE40_RS01060 XRE family transcriptional regulator insig. 28 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19390 XRE family transcriptional regulator sig. 29 76
  Paraburkholderia sabiae LMG 24235 QEN71_RS16640 XRE family transcriptional regulator insig. 28 93
  Azospirillum sp. SherDot2 MPMX19_05211 hypothetical protein insig. 30 94
  Rahnella sp. WP5 EX31_RS05710 helix-turn-helix transcriptional regulator insig. 29 96
  Burkholderia phytofirmans PsJN BPHYT_RS25015 XRE family transcriptional regulator insig. 28 93
  Sinorhizobium meliloti 1021 SMc04387 aldehyde dehydrogenase insig. 23 85
  Pseudomonas sp. BP01 JOY50_RS09135 cupin domain-containing protein insig. 22 91
  Pantoea sp. MT58 IAI47_13305 helix-turn-helix transcriptional regulator cofit 31 95
  Ralstonia solanacearum PSI07 RPSI07_RS09440 helix-turn-helix domain-containing protein insig. 27 93
  Pseudomonas sp. DMC3 GFF1048 HTH-type transcriptional regulator SutR no data 36 35
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07835 helix-turn-helix domain-containing protein insig. 27 92
  Castellaniella sp019104865 MT123 ABCV34_RS09100 XRE family transcriptional regulator cofit 29 95
  Xanthobacter sp. DMC5 GFF3339 HTH-type transcriptional regulator PuuR insig. 22 91
  Agrobacterium fabrum C58 Atu4226 transcriptional regulator sig. 37 36
  Pantoea sp. MT58 IAI47_18980 helix-turn-helix domain-containing protein sig. 33 45
  Pseudomonas stutzeri RCH2 Psest_3419 Predicted transcriptional regulators strong 42 33
  Bosea sp. OAE506 ABIE41_RS03270 XRE family transcriptional regulator insig. 29 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03588 transcriptional regulator, XRE family with cupin sensor sig. 29 92
  Pseudomonas sp. SVBP6 COO64_RS14415 helix-turn-helix domain-containing protein cofit 26 95
  Klebsiella pneumoniae MKP103 KDGMDA_23030 LacI family transcriptional regulator insig. 25 90
  Klebsiella pneumoniae MRSN742743 KFA93_RS14310 helix-turn-helix domain-containing protein cofit 25 90
  Klebsiella pneumoniae MKP103 KDGMDA_05560 XRE family transcriptional regulator insig. 38 35
  Ralstonia solanacearum GMI1000 RS_RS15735 XRE family transcriptional regulator insig. 26 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03889 HTH-type transcriptional regulator SutR insig. 26 83
  Ralstonia sp. UNC404CL21Col ABZR87_RS22690 XRE family transcriptional regulator insig. 42 34
  Dickeya dadantii 3937 DDA3937_RS07775 helix-turn-helix transcriptional regulator insig. 28 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS12920 cupin domain-containing protein insig. 25 88
  Cupriavidus basilensis FW507-4G11 RR42_RS28290 DNA-binding protein strong 44 29
  Sinorhizobium meliloti 1021 SMc02620 hypothetical protein sig. 27 81
  Sinorhizobium meliloti 1021 SMc00351 hypothetical protein insig. 26 83
  Burkholderia phytofirmans PsJN BPHYT_RS23170 XRE family transcriptional regulator insig. 25 88
  Variovorax sp. SCN45 GFF4938 no description insig. 27 85
  Phaeobacter inhibens DSM 17395 PGA1_262p00290 putative transcriptional regulator insig. 26 95
  Klebsiella pneumoniae MRSN742743 KFA93_RS12825 helix-turn-helix domain-containing protein insig. 36 35
  Burkholderia phytofirmans PsJN BPHYT_RS34660 DNA-binding protein sig. 30 83
  Cupriavidus basilensis FW507-4G11 RR42_RS21695 DNA-binding protein sig. 28 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4357 Putrescine utilization regulator sig. 25 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01814 transcriptional regulator, XRE family with cupin sensor insig. 27 98
  Xanthobacter sp. DMC5 GFF295 hypothetical protein insig. 27 85
  Acinetobacter baumannii LAC-4 RR41_RS11820 XRE family transcriptional regulator insig. 27 95
  Pantoea sp. MT58 IAI47_07115 HTH-type transcriptional regulator PuuR insig. 23 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2660 Putative transcriptional regulator insig. 33 41
  Pseudomonas fluorescens FW300-N2E3 AO353_24090 DNA-binding protein insig. 31 47
  Pantoea sp. MT58 IAI47_10265 helix-turn-helix domain-containing protein insig. 30 89
  Phocaeicola dorei CL03T12C01 ABI39_RS13480 helix-turn-helix transcriptional regulator insig. 38 28
  Pseudomonas aeruginosa PA14 IKLFDK_24455 DNA-binding protein strong 26 91
  Ralstonia solanacearum PSI07 RPSI07_RS22920 helix-turn-helix domain-containing protein insig. 25 86
  Pseudomonas sp. DMC3 GFF1632 HTH-type transcriptional regulator PuuR cofit 24 85
  Pseudomonas fluorescens FW300-N2C3 AO356_27170 XRE family transcriptional regulator strong 32 37
  Pseudomonas fluorescens SBW25 PFLU_RS15610 helix-turn-helix transcriptional regulator strong 31 48
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15610 helix-turn-helix transcriptional regulator strong 31 48
  Pseudomonas aeruginosa PUPa3 DQ20_RS31945 XRE family transcriptional regulator strong 26 91
  Pseudomonas fluorescens FW300-N2E3 AO353_29285 XRE family transcriptional regulator strong 24 85
  Azospirillum brasilense Sp245 AZOBR_RS02175 hypothetical protein insig. 40 30
  Phaeobacter inhibens DSM 17395 PGA1_c29470 puttative helix-turn-helix protein insig. 27 86
  Rahnella sp. WP5 EX31_RS24005 helix-turn-helix transcriptional regulator insig. 27 85
  Mycobacterium tuberculosis H37Rv Rv0474 Probable transcriptional regulatory protein insig. 39 31
  Bacteroides ovatus ATCC 8483 BACOVA_01302 DNA-binding helix-turn-helix protein insig. 37 34
  Marinobacter adhaerens HP15 HP15_3927 protein containing helix-turn-helix type 3 domain insig. 35 30
  Paraburkholderia sabiae LMG 24235 QEN71_RS16530 XRE family transcriptional regulator insig. 29 83
  Escherichia coli ECOR38 HEPCGN_26215 sutR DNA-binding transcriptional regulator SutR insig. 29 74
  Pseudomonas putida KT2440 PP_3125 putative transcriptional regulator (Cro/CI family) no data 28 83
  Escherichia fergusonii Becca EFB2_02548 HTH-type transcriptional regulator SutR insig. 27 74
  Rahnella sp. WP5 EX31_RS21645 XRE family transcriptional regulator insig. 27 95
  Pseudomonas aeruginosa MRSN321 DY961_RS27395 XRE family transcriptional regulator strong 26 91
  Ralstonia solanacearum PSI07 RPSI07_RS18415 XRE family transcriptional regulator insig. 26 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS23125 XRE family transcriptional regulator strong 25 96
  Shewanella sp. ANA-3 Shewana3_0319 XRE family transcriptional regulator (RefSeq) strong 27 90
  Bosea sp. OAE506 ABIE41_RS05345 cupin domain-containing protein insig. 26 83
  Sinorhizobium meliloti 1021 SMa1076 hypothetical protein insig. 33 44
  Paraburkholderia graminis OAS925 ABIE53_004670 transcriptional regulator with XRE-family HTH domain sig. 30 83
  Variovorax sp. SCN45 GFF4219 Transcriptional regulator, MerR family no data 25 88
  Bosea sp. OAE506 ABIE41_RS13175 XRE family transcriptional regulator insig. 40 30
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09265 XRE family transcriptional regulator insig. 30 39
  Pseudomonas aeruginosa MRSN321 DY961_RS21170 XRE family transcriptional regulator no data 40 31
  Pseudomonas aeruginosa PA14 IKLFDK_09190 transcriptional regulator no data 40 31
  Pseudomonas aeruginosa PUPa3 DQ20_RS55240 XRE family transcriptional regulator insig. 40 31
  Pectobacterium carotovorum WPP14 HER17_RS03720 XRE family transcriptional regulator insig. 33 50
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4551 Transcriptional regulator, MerR family insig. 28 84
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10395 helix-turn-helix domain-containing protein insig. 26 87
  Ralstonia solanacearum UW163 UW163_RS03185 helix-turn-helix domain-containing protein no data 26 87
  Pseudomonas sp. BP01 JOY50_RS21490 helix-turn-helix domain-containing protein no data 27 83
  Bifidobacterium breve UCC2003 BBR_RS16540 XRE family transcriptional regulator strong 44 24
  Magnetospirillum magneticum AMB-1 AMB_RS23745 XRE family transcriptional regulator insig. 26 49