Homologs of PP_2146 from Pseudomonas putida KT2440

helicase SNF2/RAD54 family
SEED: COG0553: Superfamily II DNA/RNA helicases, SNF2 family

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2146 helicase SNF2/RAD54 family insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS25090 DEAD/DEAH box helicase insig. 93 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3913 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 57 98
o Pseudomonas orientalis W4I3 QF045_RS10265 DEAD/DEAH box helicase cofit 56 100
o Pseudomonas sp. DMC3 GFF1282 hypothetical protein insig. 55 99
  Pseudomonas sp. SVBP6 COO64_RS09450 DEAD/DEAH box helicase insig. 67 69
  Pseudomonas syringae pv. syringae B728a Psyr_1894 SNF2-related:Helicase, C-terminal:SWIM Zn-finger insig. 62 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1894 SNF2-related:Helicase, C-terminal:SWIM Zn-finger insig. 62 69
  Pseudomonas fluorescens FW300-N2C3 AO356_02280 helicase insig. 62 72
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01657 hypothetical protein cofit 61 73
  Pseudomonas sp. RS175 PFR28_01121 hypothetical protein insig. 62 72
  Pseudomonas simiae WCS417 PS417_07625 helicase insig. 60 73
  Pseudomonas fluorescens SBW25 PFLU_RS07700 DEAD/DEAH box helicase cofit 60 73
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07700 DEAD/DEAH box helicase sig. 60 73
  Pseudomonas orientalis W4I3 QF045_RS10270 DEAD/DEAH box helicase cofit 59 73
  Pseudomonas sp. DMC3 GFF1283 hypothetical protein cofit 62 71
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2280 COG0553: Superfamily II DNA/RNA helicases, SNF2 family strong 62 72
  Pseudomonas fluorescens FW300-N2E3 AO353_00445 helicase insig. 63 70
  Pseudomonas stutzeri RCH2 Psest_1651 Superfamily II DNA/RNA helicases, SNF2 family insig. 63 69
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4029 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 62 71
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3914 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 60 73
  Pseudomonas aeruginosa PA14 IKLFDK_03460 helicase insig. 61 70
  Pseudomonas segetis P6 ACVTMO_RS17730 DEAD/DEAH box helicase insig. 58 70
  Pseudomonas aeruginosa PUPa3 DQ20_RS44350 DEAD/DEAH box helicase sig. 64 60
  Pseudomonas aeruginosa MRSN321 DY961_RS08500 DEAD/DEAH box helicase insig. 64 60
o Paraburkholderia graminis OAS925 ABIE53_006198 superfamily II DNA or RNA helicase insig. 42 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06540 Superfamily II DNA or RNA helicase, SNF2 family insig. 41 96
o Burkholderia phytofirmans PsJN BPHYT_RS24775 helicase insig. 42 96
o Shewanella oneidensis MR-1 SO1651 Snf2 family protein (NCBI ptt file) sig. 39 95
o Shewanella sp. ANA-3 Shewana3_2795 SNF2-related protein (RefSeq) strong 38 98
  Rhodospirillum rubrum S1H Rru_A0208 SNF2 helicase-related protein (NCBI) insig. 45 75
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14040 helicase insig. 45 69
  Erwinia tracheiphila SCR3 LU632_RS20970 DEAD/DEAH box helicase cofit 45 69
o Rhodanobacter sp. FW510-T8 OKGIIK_13010 hepA ATP-dependent helicase insig. 42 82
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13245 DEAD/DEAH box helicase strong 42 82
o Rhodanobacter denitrificans MT42 LRK55_RS10555 DEAD/DEAH box helicase cofit 42 82
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03655 DEAD/DEAH box helicase insig. 44 75
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10865 DEAD/DEAH box helicase sig. 42 82
  Erwinia amylovora T8 OLJFJH_07310 helicase insig. 45 69
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09905 DEAD/DEAH box helicase insig. 38 98
  Acidovorax sp. GW101-3H11 Ac3H11_2870 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 47 64
o Azospirillum sp. SherDot2 MPMX19_01520 hypothetical protein insig. 46 64
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02670 DEAD/DEAH box helicase insig. 44 74
  Rhodanobacter sp. FW510-T8 OKGIIK_16155 Helicase SNF2 insig. 44 73
  Acidovorax sp. GW101-3H11 Ac3H11_2184 FIG00348557: hypothetical protein insig. 43 64
  Rhodanobacter denitrificans MT42 LRK55_RS17115 DEAD/DEAH box helicase insig. 35 98
  Herbaspirillum seropedicae SmR1 HSERO_RS22930 helicase insig. 43 63
  Shewanella loihica PV-4 Shew_1892 SNF2-related protein (RefSeq) sig. 43 55
  Desulfovibrio vulgaris Miyazaki F DvMF_0789 Non-specific serine/threonine protein kinase (RefSeq) no data 49 44
  Desulfovibrio vulgaris Hildenborough JW710 DVU2085 Snf2 family protein (TIGR) strong 47 44
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22985 helicase SNF2 strong 36 63
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17010 helicase SNF2 strong 43 44
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20105 DEAD/DEAH box helicase strong 34 63
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1542 Superfamily II DNA/RNA helicases, SNF2 family strong 43 44
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08215 DNA helicase insig. 44 45
  Cupriavidus basilensis FW507-4G11 RR42_RS03175 DNA helicase strong 44 43
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0444 Superfamily II DNA/RNA helicases, SNF2 family insig. 45 40
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02650 DNA helicase insig. 43 41
  Fusobacterium nucleatum SB010 HUW76_05800 DEAD/DEAH box helicase cofit 40 43
  Fusobacterium nucleatum SB010 HUW76_08675 DEAD/DEAH box helicase family protein strong 40 42
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10950 DEAD/DEAH box helicase insig. 50 32
  Mycobacterium tuberculosis H37Rv Rv2101 Probable helicase HelZ insig. 45 43
  Synechocystis sp000284455 PCC 6803 SGL_RS17180 DEAD/DEAH box helicase strong 40 48
  Bacteroides ovatus ATCC 8483 BACOVA_01961 SNF2 family N-terminal domain protein insig. 40 41
  Synechococcus elongatus PCC 7942 Synpcc7942_0874 DEAD/DEAH box helicase-like strong 43 41
  Bifidobacterium breve UCC2003 BBR_RS17985 helicase strong 40 43
  Cupriavidus basilensis FW507-4G11 RR42_RS08740 helicase insig. 40 43
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17645 SNF2-related protein insig. 31 78
  Bacteroides thetaiotaomicron VPI-5482 BT3353 Snf2 family helicase (NCBI ptt file) sig. 39 36
  Variovorax sp. OAS795 ABID97_RS21795 DEAD/DEAH box helicase cofit 36 39
  Cupriavidus basilensis FW507-4G11 RR42_RS36870 helicase SNF2 insig. 33 42
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3463.1 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 34 38
  Acinetobacter radioresistens SK82 MPMX26_02863 RNA polymerase-associated protein RapA insig. 34 40
  Escherichia coli ECRC100 OKFHMN_05760 zorD Zorya protein ZorD cofit 33 43
  Shewanella sp. ANA-3 Shewana3_3788 SNF2-related protein (RefSeq) cofit 29 37
  Rhizobium sp. OAE497 ABIE40_RS12300 DEAD/DEAH box helicase insig. 30 42
  Vibrio cholerae E7946 ATCC 55056 CSW01_08835 helicase insig. 30 37
  Bacteroides stercoris CC31F HMPREF1181_RS07090 DEAD/DEAH box helicase insig. 27 41
  Pseudomonas aeruginosa PA14 IKLFDK_01235 ATP-dependent helicase insig. 28 39
  Pseudomonas aeruginosa MRSN321 DY961_RS04225 DEAD/DEAH box helicase insig. 26 33
  Pseudomonas syringae pv. syringae B728a Psyr_1520 SNF2-related:Helicase, C-terminal insig. 27 38
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1520 SNF2-related:Helicase, C-terminal insig. 27 38
  Magnetospirillum magneticum AMB-1 AMB_RS04645 ATP-dependent helicase cofit 26 41
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02520 DEAD/DEAH box helicase insig. 25 33
  Pseudomonas fluorescens FW300-N2E3 AO353_00445 helicase insig. 44 10
  Pseudomonas sp. RS175 PFR28_01121 hypothetical protein insig. 47 8
  Pseudomonas fluorescens FW300-N2C3 AO356_02280 helicase insig. 47 8
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2280 COG0553: Superfamily II DNA/RNA helicases, SNF2 family strong 47 8
  Pseudomonas sp. DMC3 GFF1283 hypothetical protein cofit 42 11
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3914 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 44 11
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4029 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 42 11
  Pseudomonas orientalis W4I3 QF045_RS10270 DEAD/DEAH box helicase cofit 46 9
  Pseudomonas fluorescens SBW25 PFLU_RS07700 DEAD/DEAH box helicase cofit 44 9
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07700 DEAD/DEAH box helicase sig. 44 9
  Pseudomonas simiae WCS417 PS417_07625 helicase insig. 44 9
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01657 hypothetical protein cofit 44 9
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 27 18
  Sphingobium sp. HT1-2 GFF2203 SWI/SNF family helicase cofit 25 39
  Pseudomonas segetis P6 ACVTMO_RS17730 DEAD/DEAH box helicase insig. 40 7
  Bacteroides thetaiotaomicron VPI-5482 BT3353 Snf2 family helicase (NCBI ptt file) sig. 56 5