Homologs of PP_0353 from Pseudomonas putida KT2440

Exonuclease
SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)
KEGG: DNA polymerase III subunit epsilon

91 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0353 Exonuclease strong 100 100
o Pseudomonas sp. RS175 PFR28_04113 DNA polymerase III PolC-type insig. 69 97
o Pseudomonas simiae WCS417 PS417_26060 DNA polymerase III subunit epsilon strong 68 97
o Pseudomonas fluorescens FW300-N2E3 AO353_07575 DNA polymerase III subunit epsilon sig. 67 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1136 DNA polymerase III epsilon subunit (EC 2.7.7.7) insig. 68 97
o Pseudomonas fluorescens SBW25 PFLU_RS27700 3'-5' exonuclease cofit 67 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27700 3'-5' exonuclease sig. 67 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2475 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 67 97
o Pseudomonas fluorescens FW300-N2C3 AO356_14085 DNA polymerase III subunit epsilon sig. 68 97
o Pseudomonas syringae pv. syringae B728a Psyr_4703 Exonuclease no data 67 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4703 Exonuclease no data 67 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4749 DNA polymerase III epsilon subunit (EC 2.7.7.7) insig. 68 92
o Pseudomonas sp. S08-1 OH686_10495 DNA polymerase III epsilon subunit insig. 58 97
o Pseudomonas stutzeri RCH2 Psest_0349 DNA polymerase III, alpha subunit (gram-positive type) strong 54 97
o Marinobacter adhaerens HP15 HP15_1253 DNA polymerase III, epsilon subunit sig. 44 87
o Dechlorosoma suillum PS Dsui_2005 DNA polymerase III epsilon subunit-like 3'-5' exonuclease cofit 37 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00110 DNA polymerase III subunit epsilon insig. 34 70
  Vibrio cholerae E7946 ATCC 55056 CSW01_01525 3'-5' exonuclease insig. 29 77
  Fusobacterium nucleatum SB010 HUW76_02840 PolC-type DNA polymerase III no data 29 75
  Magnetospirillum magneticum AMB-1 AMB_RS07795 DNA polymerase III subunit epsilon insig. 31 73
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1270 DNA polymerase III, alpha subunit (gram-positive type) strong 28 75
  Azospirillum brasilense Sp245 AZOBR_RS14205 exonuclease strong 30 83
  Dinoroseobacter shibae DFL-12 Dshi_3559 DNA polymerase III, epsilon subunit (RefSeq) cofit 29 77
  Ralstonia sp. UNC404CL21Col ABZR87_RS07945 3'-5' exonuclease insig. 33 50
  Azospirillum sp. SherDot2 MPMX19_01859 3'-5' exonuclease DinG insig. 28 83
  Shewanella amazonensis SB2B Sama_1525 DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq) strong 33 65
  Shewanella sp. ANA-3 Shewana3_1577 exonuclease, RNase T and DNA polymerase III (RefSeq) sig. 32 68
  Shewanella loihica PV-4 Shew_2368 exonuclease, RNase T and DNA polymerase III (RefSeq) no data 31 70
  Shewanella oneidensis MR-1 SO2855 exonuclease (NCBI ptt file) insig. 30 64
  Rhodospirillum rubrum S1H Rru_A0633 Exonuclease (NCBI) insig. 27 51
  Shewanella sp. ANA-3 Shewana3_2251 DNA polymerase III, epsilon subunit (RefSeq) insig. 31 77
  Shewanella oneidensis MR-1 SO2245 dnaQ-1 DNA polymerase III, epsilon subunit (NCBI ptt file) sig. 32 77
  Bacteroides ovatus ATCC 8483 BACOVA_00857 putative DNA polymerase III, epsilon subunit insig. 26 73
  Marinobacter adhaerens HP15 HP15_3950 exonuclease, RNase T and DNA polymerase III insig. 30 70
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13650 DNA polymerase III subunit epsilon no data 28 70
  Rhodopseudomonas palustris CGA009 TX73_001565 DNA polymerase III subunit epsilon no data 29 81
  Bifidobacterium breve UCC2003 BBR_RS13650 3'-5' exonuclease insig. 28 65
  Desulfovibrio vulgaris Hildenborough JW710 DVU0443 exonuclease, putative (Keith Keller) insig. 34 37
  Vibrio cholerae E7946 ATCC 55056 CSW01_06520 3'-5' exonuclease insig. 28 73
  Dinoroseobacter shibae DFL-12 Dshi_3448 DNA polymerase III, epsilon subunit (RefSeq) strong 28 71
  Bacteroides thetaiotaomicron VPI-5482 BT1431 putative DNA polymerase III epsilon chain (NCBI ptt file) insig. 24 75
  Caulobacter crescentus NA1000 CCNA_00005 DNA polymerase III, epsilon chain no data 29 70
  Caulobacter crescentus NA1000 Δfur CCNA_00005 DNA polymerase III, epsilon chain no data 29 70
  Alteromonas macleodii MIT1002 MIT1002_01242 Ribonuclease T sig. 29 71
  Shewanella oneidensis MR-1 SO2559 dnaQ-2 DNA polymerase III, epsilon subunit (NCBI ptt file) no data 26 69
  Shewanella amazonensis SB2B Sama_1880 DNA-directed DNA polymerase (RefSeq) no data 25 70
  Phocaeicola dorei CL03T12C01 ABI39_RS15285 3'-5' exonuclease insig. 27 69
  Shewanella loihica PV-4 Shew_0050 DNA polymerase III subunit epsilon (RefSeq) insig. 26 76
  Magnetospirillum magneticum AMB-1 AMB_RS23000 DNA polymerase III subunit epsilon no data 28 70
  Bosea sp. OAE506 ABIE41_RS16250 3'-5' exonuclease insig. 31 72
  Herbaspirillum seropedicae SmR1 HSERO_RS17105 DNA polymerase III subunit epsilon strong 27 69
  Vibrio cholerae E7946 ATCC 55056 CSW01_11380 DNA polymerase III subunit epsilon no data 25 76
  Desulfovibrio vulgaris Miyazaki F DvMF_0318 Exonuclease RNase T and DNA polymerase III (RefSeq) insig. 38 35
  Azospirillum sp. SherDot2 MPMX19_02562 DNA polymerase III subunit epsilon no data 26 80
  Shewanella sp. ANA-3 Shewana3_2365 DNA polymerase III, epsilon subunit (RefSeq) no data 25 70
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01780 3'-5' exonuclease strong 26 69
  Pseudomonas syringae pv. syringae B728a Psyr_4300 DNA polymerase III, epsilon subunit insig. 26 73
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4300 DNA polymerase III, epsilon subunit insig. 26 73
  Rahnella sp. WP5 EX31_RS13815 ribonuclease T insig. 28 72
  Shewanella loihica PV-4 Shew_2111 DNA polymerase III, epsilon subunit (RefSeq) no data 25 75
  Pseudomonas simiae WCS417 PS417_24520 DNA polymerase III subunit epsilon sig. 29 74
  Shewanella loihica PV-4 Shew_1871 DNA polymerase III, epsilon subunit (RefSeq) no data 29 40
  Pseudomonas fluorescens FW300-N2C3 AO356_15515 DNA polymerase III subunit epsilon insig. 27 74
  Pseudomonas sp. S08-1 OH686_08770 DNA polymerase III alpha subunit insig. 28 70
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12830 3'-5' exonuclease insig. 27 74
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2192 DNA polymerase III, epsilon subunit, Proteobacterial no data 27 70
  Alteromonas macleodii MIT1002 MIT1002_01691 DNA polymerase III subunit epsilon no data 23 70
  Cupriavidus basilensis FW507-4G11 RR42_RS25820 DNA polymerase III subunit epsilon insig. 28 41
  Azospirillum brasilense Sp245 AZOBR_RS01775 DNA polymerase III subunit epsilon sig. 28 70
  Pseudomonas sp. RS175 PFR28_03828 DNA polymerase III PolC-type no data 28 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2733 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 26 74
  Pseudomonas fluorescens SBW25 PFLU_RS26455 3'-5' exonuclease insig. 29 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26455 3'-5' exonuclease insig. 29 72
  Pseudomonas putida KT2440 PP_4768 Exonuclease insig. 27 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5043 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 26 74
  Rhizobium sp. OAE497 ABIE40_RS26835 3'-5' exonuclease insig. 25 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1406 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 25 74
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2127 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 26 68
  Dickeya dianthicola 67-19 HGI48_RS12665 ribonuclease T no data 29 72
  Dickeya dianthicola ME23 DZA65_RS13120 ribonuclease T insig. 29 72
  Rhodospirillum rubrum S1H Rru_A3611 DNA polymerase III, epsilon subunit (NCBI) no data 28 71
  Kangiella aquimarina DSM 16071 B158DRAFT_1064 DNA polymerase III, epsilon subunit, Proteobacterial strong 25 69
  Dickeya dadantii 3937 DDA3937_RS12605 ribonuclease T no data 29 72
  Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 27 67
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4954 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 27 69
  Rhizobium sp. OAE497 ABIE40_RS19260 DNA polymerase III subunit epsilon insig. 26 69
  Alteromonas macleodii MIT1002 MIT1002_03947 DNA polymerase III PolC-type insig. 24 73
  Pseudomonas fluorescens FW300-N2E3 AO353_06275 DNA polymerase III subunit epsilon insig. 26 74
  Serratia liquefaciens MT49 IAI46_11265 ribonuclease T insig. 28 72
  Cupriavidus basilensis FW507-4G11 RR42_RS36200 ethanolamine utilization protein insig. 27 66
  Sinorhizobium meliloti 1021 SMc02789 DNA polymerase III subunit epsilon no data 26 69