Homologs of MPMX19_02595 from Azospirillum sp. SherDot2

RNA 2',3'-cyclic phosphodiesterase
SEED: 2'-5' RNA ligase
KEGG: 2'-5' RNA ligase

83 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Azospirillum sp. SherDot2 MPMX19_02595 RNA 2',3'-cyclic phosphodiesterase insig. 100 100
o Azospirillum brasilense Sp245 AZOBR_RS02280 2'-5' RNA ligase no data 75 97
o Magnetospirillum magneticum AMB-1 AMB_RS21900 RNA 2',3'-cyclic phosphodiesterase no data 52 97
o Rhodospirillum rubrum S1H Rru_A3649 2',5' RNA ligase (NCBI) insig. 44 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2766 2'-5' RNA ligase insig. 44 98
o Agrobacterium fabrum C58 Atu2678 2'-5' RNA ligase sig. 42 98
o Xanthobacter sp. DMC5 GFF1772 RNA 2',3'-cyclic phosphodiesterase insig. 44 97
o Rhizobium sp. OAE497 ABIE40_RS18230 RNA 2',3'-cyclic phosphodiesterase insig. 41 100
o Sinorhizobium meliloti 1021 SMc03835 2'-5' RNA ligase sig. 41 97
o Caulobacter crescentus NA1000 CCNA_03776 2'-5' RNA ligase strong 40 97
o Caulobacter crescentus NA1000 Δfur CCNA_03776 2'-5' RNA ligase cofit 40 97
o Bosea sp. OAE506 ABIE41_RS04825 RNA 2',3'-cyclic phosphodiesterase insig. 43 97
o Sphingobium sp. HT1-2 GFF1762 '2'-5' RNA ligase' transl_table=11 cofit 42 98
o Rhodopseudomonas palustris CGA009 TX73_001005 RNA 2',3'-cyclic phosphodiesterase insig. 40 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12890 RNA 2',3'-cyclic phosphodiesterase cofit 40 97
o Marinobacter adhaerens HP15 HP15_881 2',5' RNA ligase insig. 35 98
o Cupriavidus basilensis FW507-4G11 RR42_RS21505 hypothetical protein insig. 39 98
o Methanococcus maripaludis S2 MMP_RS03220 RNA 2' 3'-cyclic phosphodiesterase sig. 23 95
o Methanococcus maripaludis JJ MMJJ_RS01850 RNA 2',3'-cyclic phosphodiesterase insig. 23 94
o Klebsiella pneumoniae MKP103 KDGMDA_13280 RNA 2' 3'-cyclic phosphodiesterase insig. 32 96
o Klebsiella michiganensis M5al BWI76_RS05025 2'-5' RNA ligase sig. 33 96
o Shewanella amazonensis SB2B Sama_2974 putative 2'-5' RNA ligase (RefSeq) insig. 31 96
o Kangiella aquimarina DSM 16071 B158DRAFT_0039 2'-5' RNA ligase insig. 30 96
  Desulfovibrio vulgaris Miyazaki F DvMF_0904 2'-5' RNA ligase (RefSeq) insig. 32 82
o Erwinia tracheiphila SCR3 LU632_RS20070 thpR RNA 2',3'-cyclic phosphodiesterase insig. 29 96
o Castellaniella sp019104865 MT123 ABCV34_RS12550 RNA 2',3'-cyclic phosphodiesterase cofit 32 98
  Escherichia coli ECRC100 OKFHMN_10335 thpR RNA 2',3'-cyclic phosphodiesterase insig. 34 68
  Escherichia coli ECRC101 MCAODC_00850 thpR RNA 2',3'-cyclic phosphodiesterase insig. 34 68
  Escherichia coli ECRC102 NIAGMN_08185 thpR RNA 2',3'-cyclic phosphodiesterase cofit 34 68
  Escherichia coli ECRC98 JDDGAC_13930 thpR RNA 2',3'-cyclic phosphodiesterase sig. 34 68
  Escherichia coli ECRC99 KEDOAH_17820 thpR RNA 2',3'-cyclic phosphodiesterase no data 34 68
  Escherichia coli BL21 ECD_00146 2'-5' RNA ligase insig. 34 68
  Escherichia fergusonii Becca EFB2_03897 RNA 2',3'-cyclic phosphodiesterase insig. 34 68
  Escherichia coli ECOR27 NOLOHH_02680 thpR RNA 2',3'-cyclic phosphodiesterase insig. 34 68
  Escherichia coli ECOR38 HEPCGN_08285 thpR RNA 2',3'-cyclic phosphodiesterase insig. 34 68
  Escherichia coli ECRC62 BNILDI_08990 thpR RNA 2',3'-cyclic phosphodiesterase insig. 34 68
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03515 'RNA 2',3'-cyclic phosphodiesterase' transl_table=11 insig. 34 68
  Escherichia coli BW25113 b0147 yadP orf, hypothetical protein (VIMSS) strong 34 68
  Escherichia coli Nissle 1917 ECOLIN_RS00825 RNA 2',3'-cyclic phosphodiesterase no data 34 68
  Escherichia coli Nissle 1917 ECOLIN_RS25975 RNA 2',3'-cyclic phosphodiesterase no data 34 68
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_15070 thpR RNA 2' 3'-cyclic phosphodiesterase cofit 28 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS28000 RNA 2',3'-cyclic phosphodiesterase insig. 28 96
o Ralstonia solanacearum GMI1000 RS_RS11870 RNA 2',3'-cyclic phosphodiesterase insig. 30 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13380 RNA 2',3'-cyclic phosphodiesterase insig. 29 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF85 '2'-5' RNA ligase' transl_table=11 insig. 28 96
o Shewanella loihica PV-4 Shew_3126 2'-5' RNA ligase (RefSeq) insig. 28 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_12700 RNA 2',3'-cyclic phosphodiesterase insig. 27 96
o Pantoea sp. MT58 IAI47_15625 RNA 2',3'-cyclic phosphodiesterase insig. 28 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4348 2'-5' RNA ligase no data 33 97
o Lysobacter sp. OAE881 ABIE51_RS12220 RNA 2',3'-cyclic phosphodiesterase insig. 32 96
o Pectobacterium carotovorum WPP14 HER17_RS05590 RNA 2',3'-cyclic phosphodiesterase cofit 29 95
o Pseudomonas stutzeri RCH2 Psest_3556 2'-5' RNA ligase insig. 28 96
  Enterobacter sp. TBS_079 MPMX20_00833 RNA 2',3'-cyclic phosphodiesterase insig. 30 68
o Erwinia amylovora T8 OLJFJH_00755 RNA 2' 3'-cyclic phosphodiesterase insig. 26 96
o Pseudomonas sp. S08-1 OH686_01815 2'-5' RNA ligase insig. 31 97
o Pseudomonas fluorescens FW300-N2E3 AO353_29050 2'-5' RNA ligase insig. 29 96
o Enterobacter asburiae PDN3 EX28DRAFT_3736 2'-5' RNA ligase insig. 28 96
o Dickeya dadantii 3937 DDA3937_RS15925 RNA 2',3'-cyclic phosphodiesterase insig. 29 96
o Pseudomonas sp. DMC3 GFF1623 RNA 2',3'-cyclic phosphodiesterase insig. 30 96
  Pseudomonas putida KT2440 PP_2424 putative 2'-5' RNA ligase insig. 34 68
o Serratia liquefaciens MT49 IAI46_21200 RNA 2',3'-cyclic phosphodiesterase insig. 27 96
o Dickeya dianthicola 67-19 HGI48_RS16040 RNA 2',3'-cyclic phosphodiesterase insig. 29 96
o Dickeya dianthicola ME23 DZA65_RS17125 RNA 2',3'-cyclic phosphodiesterase insig. 29 96
  Pseudomonas sp. BP01 JOY50_RS10420 thpR RNA 2',3'-cyclic phosphodiesterase no data 34 68
  Pseudomonas sp. SVBP6 COO64_RS08390 thpR RNA 2',3'-cyclic phosphodiesterase insig. 34 68
  Pseudomonas aeruginosa MRSN321 DY961_RS02685 thpR;go_function=2'-5'-RNA RNA 2' 3'-cyclic phosphodiesterase insig. 30 98
  Rahnella sp. WP5 EX31_RS03240 RNA 2',3'-cyclic phosphodiesterase insig. 26 96
  Alteromonas macleodii MIT1002 MIT1002_00405 2'-5'-RNA ligase insig. 29 50
  Shewanella oneidensis MR-1 SO0627 putative 2'-5' RNA ligase (NCBI ptt file) insig. 28 79
  Shewanella sp. ANA-3 Shewana3_0619 2'-5' RNA ligase (RefSeq) cofit 26 83
  Pseudomonas aeruginosa PUPa3 DQ20_RS32910 thpR;go_function=2'-5'-RNA RNA 2' 3'-cyclic phosphodiesterase sig. 30 97
  Dechlorosoma suillum PS Dsui_2392 2''-5'' RNA ligase insig. 30 80
  Pseudomonas aeruginosa PA14 IKLFDK_14535 RNA 2' 3'-cyclic phosphodiesterase no data 29 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00580 RNA 2',3'-cyclic phosphodiesterase insig. 31 67
  Ralstonia solanacearum UW163 UW163_RS13910 RNA 2',3'-cyclic phosphodiesterase insig. 31 67
  Pseudomonas segetis P6 MPMX49_04170 RNA 2',3'-cyclic phosphodiesterase insig. 29 96
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12970 RNA 2',3'-cyclic phosphodiesterase insig. 29 85
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00235 2'-5' RNA ligase family protein insig. 33 67
  Ralstonia solanacearum PSI07 RPSI07_RS16920 RNA 2',3'-cyclic phosphodiesterase insig. 31 67
  Variovorax sp. SCN45 GFF203 hypothetical protein insig. 29 80
  Ralstonia solanacearum GMI1000 RS_RS07265 RNA 2',3'-cyclic phosphodiesterase insig. 31 81
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15780 2'-5' RNA ligase family protein insig. 27 83
  Agrobacterium fabrum C58 Atu0278 hypothetical protein insig. 36 50