Homologs of LRK55_RS15770 from Rhodanobacter denitrificans MT42

ribonuclease D
SEED: Ribonuclease D (EC 3.1.26.3)

86 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans MT42 LRK55_RS15770 ribonuclease D cofit 100 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16010 ribonuclease D sig. 100 100
o Rhodanobacter sp. FW510-T8 OKGIIK_08985 Ribonuclease D insig. 85 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07350 ribonuclease D insig. 72 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2248.1 Ribonuclease D (EC 3.1.26.3) insig. 42 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) insig. 38 95
o Pseudomonas fluorescens FW300-N2E3 AO353_17855 ribonuclease D strong 38 95
o Pseudomonas sp. RS175 PFR28_00712 Ribonuclease D insig. 38 95
o Pseudomonas fluorescens FW300-N2C3 AO356_04420 ribonuclease D sig. 37 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3345 Ribonuclease D (EC 3.1.26.3) sig. 37 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) sig. 38 95
o Pseudomonas putida KT2440 PP_4591 Ribonuclease D sig. 38 89
o Marinobacter adhaerens HP15 HP15_1882 ribonuclease D insig. 34 97
o Pseudomonas syringae pv. syringae B728a Psyr_1563 Ribonuclease D strong 38 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1563 Ribonuclease D insig. 38 95
o Shewanella sp. ANA-3 Shewana3_2385 ribonuclease D (RefSeq) insig. 33 96
o Pseudomonas stutzeri RCH2 Psest_2995 ribonuclease D no data 37 89
o Shewanella amazonensis SB2B Sama_1933 ribonuclease D (RefSeq) strong 33 97
o Shewanella loihica PV-4 Shew_2187 ribonuclease D (RefSeq) insig. 36 90
o Pseudomonas fluorescens SBW25 PFLU_RS07465 ribonuclease D insig. 37 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07465 ribonuclease D strong 37 95
o Pseudomonas sp. S08-1 OH686_05315 ribonuclease D strong 38 89
o Pseudomonas simiae WCS417 PS417_07375 ribonuclease D sig. 36 95
o Shewanella oneidensis MR-1 SO2580 rnd ribonuclease D (NCBI ptt file) sig. 33 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1574 ribonuclease D insig. 31 89
o Azospirillum sp. SherDot2 MPMX19_00986 Ribonuclease D sig. 33 95
o Escherichia coli BL21 ECD_01774 ribonuclease D insig. 34 96
o Escherichia fergusonii Becca EFB2_02196 Ribonuclease D insig. 34 96
o Escherichia coli ECOR27 NOLOHH_17125 rnd ribonuclease D no data 34 96
o Escherichia coli ECOR38 HEPCGN_04995 rnd ribonuclease D cofit 34 96
o Escherichia coli ECRC101 OKFHMN_26605 rnd ribonuclease D no data 34 96
o Escherichia coli ECRC101 MCAODC_18805 rnd ribonuclease D insig. 34 96
o Escherichia coli ECRC102 NIAGMN_01460 rnd ribonuclease D no data 34 96
o Escherichia coli ECRC62 BNILDI_15910 rnd ribonuclease D insig. 34 96
o Escherichia coli ECRC98 JDDGAC_01180 rnd ribonuclease D no data 34 96
o Escherichia coli ECRC99 KEDOAH_01505 rnd ribonuclease D no data 34 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01929 Ribonuclease D insig. 34 96
o Escherichia coli Nissle 1917 ECOLIN_RS10035 ribonuclease D no data 34 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2819 Ribonuclease D (EC 3.1.26.3) strong 32 96
o Escherichia coli BW25113 b1804 rnd ribonuclease D (NCBI) strong 34 96
o Enterobacter asburiae PDN3 EX28DRAFT_0755 ribonuclease D strong 34 92
o Pantoea sp. MT58 IAI47_08840 ribonuclease D sig. 33 92
o Klebsiella michiganensis M5al BWI76_RS17795 ribonuclease D sig. 31 96
o Rahnella sp. WP5 EX31_RS10595 ribonuclease D insig. 32 97
o Enterobacter sp. TBS_079 MPMX20_02710 Ribonuclease D strong 33 92
o Azospirillum brasilense Sp245 AZOBR_RS16220 ribonuclease D insig. 32 95
o Serratia liquefaciens MT49 IAI46_14530 ribonuclease D insig. 32 92
o Sinorhizobium meliloti 1021 SMc00622 ribonuclease D protein strong 31 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_09900 ribonuclease D insig. 30 95
o Caulobacter crescentus NA1000 CCNA_01776 ribonuclease D no data 33 93
o Caulobacter crescentus NA1000 Δfur CCNA_01776 ribonuclease D no data 33 93
o Agrobacterium fabrum C58 Atu1151 ribonuclease D no data 32 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08205 ribonuclease D no data 31 94
o Pectobacterium carotovorum WPP14 HER17_RS11270 ribonuclease D strong 32 92
  Rhodospirillum rubrum S1H Rru_A2073 Ribonuclease D (NCBI) no data 36 73
o Dickeya dianthicola 67-19 HGI48_RS11255 ribonuclease D cofit 32 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0222 ribonuclease D no data 35 65
o Dickeya dadantii 3937 DDA3937_RS11220 ribonuclease D insig. 31 96
o Alteromonas macleodii MIT1002 MIT1002_02587 Ribonuclease D insig. 29 96
o Dickeya dianthicola ME23 DZA65_RS11600 ribonuclease D sig. 32 96
o Phaeobacter inhibens DSM 17395 PGA1_c13290 putative ribonuclease D no data 32 93
o Erwinia tracheiphila SCR3 LU632_RS13130 rnd ribonuclease D insig. 33 92
o Rhizobium sp. OAE497 ABIE40_RS06640 ribonuclease D no data 31 92
o Acinetobacter radioresistens SK82 MPMX26_01642 Ribonuclease D strong 29 97
o Bosea sp. OAE506 ABIE41_RS16115 ribonuclease D no data 35 68
  Magnetospirillum magneticum AMB-1 AMB_RS14275 ribonuclease D no data 33 70
  Dinoroseobacter shibae DFL-12 Dshi_1887 ribonuclease D (RefSeq) strong 33 76
  Rhodopseudomonas palustris CGA009 TX73_015755 ribonuclease D strong 33 69
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18455 ribonuclease D insig. 30 65
  Mycobacterium tuberculosis H37Rv Rv2681 Conserved hypothetical alanine rich protein sig. 32 51
  Rhodospirillum rubrum S1H Rru_A0015 3'-5' exonuclease (NCBI) no data 32 50
  Rhodopseudomonas palustris CGA009 TX73_000240 ribonuclease D no data 34 41
  Bifidobacterium breve UCC2003 BBR_RS14490 ribonuclease D strong 32 59
  Bosea sp. OAE506 ABIE41_RS00145 ribonuclease D no data 32 42
  Magnetospirillum magneticum AMB-1 AMB_RS19900 ribonuclease D no data 32 43
  Synechococcus elongatus PCC 7942 Synpcc7942_0678 rnd 3'-5' exonuclease strong 32 43
  Azospirillum brasilense Sp245 AZOBR_RS18845 3'-5' exonuclease no data 30 45
  Phaeobacter inhibens DSM 17395 PGA1_c36020 putative 3'-5'-exonuclease insig. 30 41
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2539 3'-5' exonuclease no data 30 51
  Azospirillum sp. SherDot2 MPMX19_02663 Ribonuclease D no data 30 45
  Rhizobium sp. OAE497 ABIE40_RS00155 ribonuclease D strong 43 16
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS16055 ribonuclease D no data 30 43
  Dinoroseobacter shibae DFL-12 Dshi_3589 3'-5' exonuclease (RefSeq) no data 43 16
  Agrobacterium fabrum C58 Atu4108 ribonuclease D strong 32 29
  Caulobacter crescentus NA1000 CCNA_03717 ribonuclease D no data 31 34
  Caulobacter crescentus NA1000 Δfur CCNA_03717 ribonuclease D no data 31 34