Homologs of HMPREF1078_RS14565 from Parabacteroides merdae CL09T00C40

sigma-54 dependent transcriptional regulator
SEED: Transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14565 sigma-54 dependent transcriptional regulator no data 100 100
o Bacteroides stercoris CC31F HMPREF1181_RS05760 sigma-54-dependent Fis family transcriptional regulator no data 69 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17080 sigma-54-dependent Fis family transcriptional regulator strong 69 100
o Phocaeicola dorei CL03T12C01 ABI39_RS13000 sigma-54-dependent Fis family transcriptional regulator strong 69 100
o Bacteroides ovatus ATCC 8483 BACOVA_05207 Sigma-54 interaction domain protein no data 68 100
o Bacteroides thetaiotaomicron VPI-5482 BT4375 transcriptional regulator (NCBI ptt file) no data 68 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05310 sigma-54-dependent Fis family transcriptional regulator no data 60 100
o Cellulophaga baltica 18 M666_RS02315 sigma-54 dependent transcriptional regulator no data 59 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18335 sigma-54-dependent Fis family transcriptional regulator no data 58 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2375 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains no data 57 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21680 sigma-54-dependent Fis family transcriptional regulator no data 59 99
  Rhodopseudomonas palustris CGA009 TX73_007390 sigma-54-dependent Fis family transcriptional regulator insig. 52 61
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2800.1 Flagellar regulatory protein FleQ sig. 36 98
  Shewanella oneidensis MR-1 SO3689 sigma-54 dependent nitrogen response regulator (NCBI ptt file) sig. 38 97
  Paraburkholderia graminis OAS925 ABIE53_004468 transcriptional regulator with GAF, ATPase, and Fis domain insig. 53 59
  Burkholderia phytofirmans PsJN BPHYT_RS19930 transcriptional regulator insig. 53 59
  Rhodopseudomonas palustris CGA009 TX73_007055 sigma-54-dependent Fis family transcriptional regulator sig. 50 61
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03783 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains insig. 53 59
  Cupriavidus basilensis FW507-4G11 RR42_RS12705 transcriptional regulator insig. 52 59
  Shewanella sp. ANA-3 Shewana3_3257 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 37 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS20155 sigma-54 dependent transcriptional regulator insig. 38 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS14515 sigma-54 dependent transcriptional regulator insig. 52 59
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15090 sigma-54-dependent Fis family transcriptional regulator insig. 38 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU2894 flrA sigma-54 dependent transcriptional regulator (TIGR) strong 49 59
  Desulfovibrio vulgaris Hildenborough JW710 DVU1063 flrC transcriptional regulatory protein (TIGR) strong 39 96
  Rhodanobacter denitrificans MT42 LRK55_RS13225 sigma-54-dependent Fis family transcriptional regulator cofit 38 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS13485 sigma-54-dependent Fis family transcriptional regulator strong 38 96
  Rhodanobacter sp. FW510-T8 OKGIIK_02735 Fis family transcriptional regulator insig. 38 96
  Desulfovibrio vulgaris Miyazaki F DvMF_1324 sigma54 specific transcriptional regulator, Fis family (RefSeq) strong 49 59
  Pseudomonas aeruginosa PA14 IKLFDK_13385 nitric oxide reductase transcriptional regulator NorR insig. 51 58
  Paraburkholderia sabiae LMG 24235 QEN71_RS24790 sigma-54 dependent transcriptional regulator cofit 50 62
  Rhizobium sp. OAE497 ABIE40_RS09090 nitrogen regulation protein NR(I) strong 48 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1428 Alkanesulfonates-binding protein insig. 50 60
  Herbaspirillum seropedicae SmR1 HSERO_RS22915 Fis family transcriptional regulator insig. 38 95
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05540 sigma-54 dependent transcriptional regulator insig. 48 62
  Rhodospirillum rubrum S1H Rru_A1388 Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) cofit 51 61
  Paraburkholderia sabiae LMG 24235 QEN71_RS43250 sigma-54 dependent transcriptional regulator insig. 50 62
  Marinobacter adhaerens HP15 HP15_328 two component, sigma54 specific, transcriptional regulator, Fis family strong 50 62
  Pseudomonas stutzeri RCH2 Psest_0999 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 49 62
  Azospirillum brasilense Sp245 AZOBR_RS29300 Fis family transcriptional regulator insig. 49 60
  Methylophilus sp. DMC18 GFF2815 Regulatory protein AtoC insig. 38 96
  Bosea sp. OAE506 ABIE41_RS16785 nitrogen regulation protein NR(I) insig. 50 61
  Pseudomonas aeruginosa PA14 IKLFDK_29980 two-component system response regulator CbrB strong 49 62
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04160 sigma-54-dependent Fis family transcriptional regulator sig. 47 64
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12650 sigma-54 dependent transcriptional regulator insig. 46 65
  Burkholderia phytofirmans PsJN BPHYT_RS05575 Fis family transcriptional regulator strong 50 62
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04010 sigma-54 dependent transcriptional regulator insig. 46 61
  Desulfovibrio vulgaris Miyazaki F DvMF_3020 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 45 66
  Agrobacterium fabrum C58 Atu3764 sigma 54 dependent transcriptional activator sig. 36 100
  Paraburkholderia graminis OAS925 ABIE53_001365 DNA-binding NtrC family response regulator strong 49 62
  Paraburkholderia sabiae LMG 24235 QEN71_RS19020 sigma-54 dependent transcriptional regulator insig. 51 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00240 two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family strong 49 62
  Rhodanobacter denitrificans MT42 LRK55_RS04170 sigma-54 dependent transcriptional regulator cofit 48 62
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04395 sigma-54 dependent transcriptional regulator cofit 48 62
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14380 sigma-54 dependent transcriptional regulator insig. 47 62
  Pseudomonas sp. S08-1 OH686_17260 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 49 65
  Pseudomonas fluorescens FW300-N2C3 AO356_28365 Fis family transcriptional regulator sig. 49 60
  Phocaeicola dorei CL03T12C01 ABI39_RS17060 sigma-54-dependent Fis family transcriptional regulator insig. 47 64
  Shewanella amazonensis SB2B Sama_2301 response regulator receiver protein (RefSeq) strong 38 98
  Bacteroides stercoris CC31F HMPREF1181_RS03655 sigma-54-dependent Fis family transcriptional regulator cofit 45 64
  Rhodanobacter sp. FW510-T8 OKGIIK_11280 atoC sigma-54-dependent Fis family transcriptional regulator insig. 48 62
  Shewanella loihica PV-4 Shew_0726 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 36 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS15700 nitric oxide reductase transcriptional regulator NorR insig. 50 57
  Pseudomonas stutzeri RCH2 Psest_1765 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 38 96
  Ralstonia solanacearum PSI07 RPSI07_RS00800 sigma-54-dependent Fis family transcriptional regulator insig. 38 95
  Sinorhizobium meliloti 1021 SMc01043 nitrogen assimilation regulatory protein strong 47 64
  Dickeya dianthicola 67-19 HGI48_RS18785 nif-specific transcriptional activator NifA insig. 43 69
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09510 sigma-54-dependent Fis family transcriptional regulator sig. 42 76
  Dickeya dianthicola ME23 DZA65_RS19920 nif-specific transcriptional activator NifA insig. 43 69
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02112 Sigma54-dependent transcriptional activator SfnR cofit 46 68
  Shewanella loihica PV-4 Shew_1362 sigma-54 dependent trancsriptional regulator (RefSeq) strong 37 98
  Sphingobium sp. HT1-2 GFF1148 Nitrogen regulation protein NR(I), GlnG (=NtrC) strong 47 63
  Pseudomonas fluorescens SBW25 PFLU_RS10100 sigma-54-dependent Fis family transcriptional regulator insig. 46 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10100 sigma-54-dependent Fis family transcriptional regulator insig. 46 68
  Pseudomonas sp. DMC3 GFF4030 Transcriptional regulatory protein ZraR strong 46 67
  Herbaspirillum seropedicae SmR1 HSERO_RS12530 transcriptional regulator insig. 44 61
  Pseudomonas syringae pv. syringae B728a Psyr_0831 Two-component response regulator CbrB sig. 50 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0831 Two-component response regulator CbrB no data 50 62
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5813 Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR no data 51 58
  Erwinia amylovora T8 OLJFJH_13990 AAA family ATPase insig. 49 59
  Klebsiella michiganensis M5al BWI76_RS18890 nif-specific transcriptional activator NifA sig. 48 60
  Dickeya dadantii 3937 DDA3937_RS18805 nif-specific transcriptional activator NifA insig. 47 59
  Desulfovibrio vulgaris Hildenborough JW710 DVU2934 ntrX sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 47 60
  Pseudomonas sp. BP01 JOY50_RS27675 sigma-54 dependent transcriptional regulator cofit 46 66
  Pseudomonas putida KT2440 PP_2771 Sigma-54 dependent transcriptional regulator insig. 46 67
  Pseudomonas fluorescens FW300-N2C3 AO356_16945 transcriptional regulator insig. 42 75
  Pseudomonas sp. BP01 JOY50_RS05065 sfnR sigma54-dependent transcriptional activator SfnR insig. 49 60
  Pseudomonas putida KT2440 PP_4696 Nitrogen regulation protein NR(I) strong 48 64
  Pseudomonas fluorescens FW300-N2C3 AO356_16075 Fis family transcriptional regulator strong 45 69
  Azospirillum brasilense Sp245 AZOBR_RS14430 chemotaxis protein CheY strong 45 68
  Pseudomonas aeruginosa PA14 IKLFDK_05045 transcriptional regulator FleQ strong 38 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22395 sigma-54-dependent Fis family transcriptional regulator insig. 49 59
  Ralstonia solanacearum UW163 UW163_RS22940 sigma-54-dependent Fis family transcriptional regulator insig. 49 59
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5156 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 47 66
  Desulfovibrio vulgaris Miyazaki F DvMF_0823 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 50 59
  Paraburkholderia sabiae LMG 24235 QEN71_RS19345 sigma-54 dependent transcriptional regulator no data 49 59
  Desulfovibrio vulgaris Hildenborough JW710 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 48 60
  Xanthobacter sp. DMC5 GFF4834 Regulatory protein AtoC insig. 43 72
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04163 Anaerobic nitric oxide reductase transcription regulator NorR strong 38 96
  Pseudomonas fluorescens SBW25 PFLU_RS21795 sigma-54-dependent Fis family transcriptional regulator strong 49 58