Homologs of Psest_0422 from Pseudomonas stutzeri RCH2

Site-specific recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_0422 Site-specific recombinase XerD sig. 100 100
o Dechlorosoma suillum PS Dsui_1145 site-specific recombinase XerD cofit 27 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS43845 site-specific integrase insig. 26 88
  Methanococcus maripaludis JJ MMJJ_RS03475 tyrosine-type recombinase/integrase cofit 28 75
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05285 site-specific tyrosine recombinase XerD insig. 34 42
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19225 site-specific tyrosine recombinase XerD strong 35 42
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 35 46
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 35 46
  Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD sig. 34 42
  Shewanella sp. ANA-3 Shewana3_0393 tyrosine recombinase XerC (RefSeq) strong 28 46
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 35 46
  Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 26 86
  Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 33 42
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 33 42
  Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 32 45
  Klebsiella pneumoniae MKP103 KDGMDA_04300 site-specific tyrosine recombinase XerD sig. 27 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_842 Tyrosine recombinase XerC sig. 31 45
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 32 45
  Escherichia coli ECRC100 OKFHMN_14420 xerC tyrosine recombinase XerC insig. 31 44
  Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 31 44
  Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 31 44
  Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 31 44
  Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 31 44
  Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 32 45
  Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 30 47
  Pseudomonas syringae pv. syringae B728a Psyr_0185 tyrosine recombinase XerC subunit sig. 29 50
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0185 tyrosine recombinase XerC subunit sig. 29 50
  Shewanella oneidensis MR-1 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) strong 28 46
  Escherichia coli BL21 ECD_03687 site-specific tyrosine recombinase sig. 31 44
  Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC insig. 31 44
  Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC cofit 31 44
  Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC insig. 31 44
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 31 44
  Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC strong 31 44
  Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 31 44
  Pseudomonas stutzeri RCH2 Psest_3767 tyrosine recombinase XerC strong 29 50
  Pseudomonas sp. DMC3 GFF370 Tyrosine recombinase XerC cofit 31 43
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4416 Tyrosine recombinase XerC strong 31 43
  Klebsiella pneumoniae MKP103 KDGMDA_09700 tyrosine recombinase XerC strong 31 44
  Pseudomonas fluorescens SBW25 PFLU_RS29280 tyrosine recombinase XerC sig. 29 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29280 tyrosine recombinase XerC strong 29 50
  Pseudomonas simiae WCS417 PS417_27595 recombinase XerC sig. 29 50
  Pseudomonas fluorescens FW300-N2E3 AO353_09050 recombinase XerC sig. 28 50
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 33 45
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2171 Tyrosine recombinase XerC insig. 31 43
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 29 48
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 34 43
  Lysobacter sp. OAE881 ABIE51_RS04495 site-specific tyrosine recombinase XerD strong 26 79
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 33 45
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 33 45
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD insig. 33 45
  Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 33 45
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 33 45
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 33 45
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 33 45
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 33 45
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 33 45
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 33 45
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 33 45
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 33 45
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 32 46
  Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 32 44
  Pseudomonas sp. RS175 PFR28_04378 Tyrosine recombinase XerC strong 31 43
  Pseudomonas orientalis W4I3 QF045_RS01960 tyrosine recombinase XerC strong 29 50
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 26 82
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD strong 33 45
  Pseudomonas fluorescens FW300-N2C3 AO356_12725 recombinase XerC strong 31 43
  Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 30 44
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 32 46
  Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 30 42
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05657 Tyrosine recombinase XerC cofit 28 50
  Acinetobacter baumannii LAC-4 RR41_RS04465 tyrosine recombinase no data 23 82
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15880 site-specific tyrosine recombinase XerD cofit 32 44
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 35 48
  Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 30 47
  Variovorax sp. OAS795 ABID97_RS06150 tyrosine recombinase XerC sig. 25 82
  Pseudomonas sp. BP01 JOY50_RS22610 xerC tyrosine recombinase XerC insig. 28 50
  Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 29 44
  Kangiella aquimarina DSM 16071 B158DRAFT_0244 tyrosine recombinase XerC subunit strong 28 47
  Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 30 45
  Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 26 55
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF239 Tyrosine recombinase XerC no data 29 44
  Cellulophaga baltica 18 M666_RS09150 tyrosine-type recombinase/integrase sig. 31 44
  Caulobacter crescentus NA1000 CCNA_00349 integrase/recombinase, XerC-CodV family strong 26 42
  Caulobacter crescentus NA1000 Δfur CCNA_00349 integrase/recombinase, XerC-CodV family cofit 26 42
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02033 Site-specific recombinase XerD insig. 25 86
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03195 xerD site-specific tyrosine recombinase XerD no data 31 44
  Enterobacter sp. TBS_079 MPMX20_04465 Tyrosine recombinase XerC strong 29 44
  Bifidobacterium breve UCC2003 BBR_RS16655 tyrosine recombinase XerC strong 29 44
  Serratia liquefaciens MT49 IAI46_00725 tyrosine recombinase XerC insig. 24 83
  Rhodopseudomonas palustris CGA009 TX73_000945 tyrosine recombinase XerC sig. 26 50
  Ralstonia solanacearum GMI1000 RS_RS00260 Tyrosine recombinase XerC 1 insig. 25 84
  Shewanella loihica PV-4 Shew_0325 tyrosine recombinase XerC (RefSeq) sig. 29 44
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 24 86
  Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 31 44
  Bacteroides thetaiotaomicron VPI-5482 BT2742 integrase, site-specific recombinase (NCBI ptt file) insig. 29 43
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 28 45
  Cupriavidus basilensis FW507-4G11 RR42_RS00615 recombinase XerC sig. 27 66
  Acinetobacter radioresistens SK82 MPMX26_02230 Tyrosine recombinase XerC no data 27 49
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 32 49