Homologs of HP15_3721 from Marinobacter adhaerens HP15

Rad3-related DNA helicase
SEED: DinG family ATP-dependent helicase CPE1197
KEGG: DNA excision repair protein ERCC-2

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Marinobacter adhaerens HP15 HP15_3721 Rad3-related DNA helicase sig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3086 DinG family ATP-dependent helicase CPE1197 insig. 51 98
o Pseudomonas sp. S08-1 OH686_06000 DinG family ATP-dependent helicase insig. 52 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1225 DinG family ATP-dependent helicase CPE1197 strong 51 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4935 DinG family ATP-dependent helicase CPE1197 sig. 51 98
o Pseudomonas stutzeri RCH2 Psest_2236 Rad3-related DNA helicases strong 51 99
o Pseudomonas fluorescens FW300-N2C3 AO356_26990 ATP-dependent DNA helicase sig. 50 97
o Pseudomonas simiae WCS417 PS417_13500 ATP-dependent DNA helicase strong 50 98
o Pseudomonas fluorescens FW300-N2E3 AO353_24755 ATP-dependent DNA helicase sig. 50 98
o Pseudomonas sp. RS175 PFR28_02114 '3'-5' exonuclease DinG' transl_table=11 insig. 50 97
o Pseudomonas sp. DMC3 GFF2844 3'-5' exonuclease DinG insig. 50 99
o Paraburkholderia graminis OAS925 ABIE53_005889 DNA excision repair protein ERCC-2 insig. 49 98
o Pseudomonas aeruginosa PA14 IKLFDK_09095 ATP-dependent DNA helicase insig. 51 97
o Pseudomonas fluorescens SBW25 PFLU_RS15300 ATP-dependent DNA helicase insig. 49 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS15300 ATP-dependent DNA helicase insig. 49 98
o Burkholderia phytofirmans PsJN BPHYT_RS26935 ATP-dependent DNA helicase insig. 48 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS10715 ATP-dependent DNA helicase insig. 49 98
o Acidovorax sp. GW101-3H11 Ac3H11_593 DinG family ATP-dependent helicase CPE1197 insig. 50 98
o Pseudomonas sp. SVBP6 COO64_RS25380 ATP-dependent DNA helicase insig. 50 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF225 DinG family ATP-dependent helicase CPE1197 insig. 50 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02901 DNA excision repair protein ERCC-2 insig. 48 98
o Herbaspirillum seropedicae SmR1 HSERO_RS06500 ATP-dependent DNA helicase sig. 48 97
o Pseudomonas syringae pv. syringae B728a Psyr_2909 DEAD_2 insig. 47 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2909 DEAD_2 insig. 47 99
o Pseudomonas putida KT2440 PP_2839 conserved protein of unknown function insig. 50 98
o Pseudomonas sp. BP01 JOY50_RS05630 ATP-dependent DNA helicase insig. 49 98
o Variovorax sp. OAS795 ABID97_RS16280 ATP-dependent DNA helicase insig. 47 97
o Variovorax sp. SCN45 GFF164 DinG family ATP-dependent helicase CPE1197 insig. 47 99
  Pseudomonas stutzeri RCH2 Psest_0898 hypothetical protein insig. 51 21
  Dickeya dianthicola ME23 DZA65_RS11620 ATP-dependent DNA helicase insig. 26 72
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS03855 ATP-dependent DNA helicase DinG insig. 31 30
  Dickeya dianthicola 67-19 HGI48_RS11275 ATP-dependent DNA helicase insig. 26 72
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5017.1 ATP-dependent helicase DinG/Rad3 insig. 27 28
  Rhodanobacter denitrificans MT42 LRK55_RS10710 ATP-dependent DNA helicase DinG sig. 33 29
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11005 ATP-dependent DNA helicase DinG insig. 33 29
  Rhodanobacter sp. FW510-T8 OKGIIK_12870 dinG ATP-dependent DNA helicase DinG insig. 33 29
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16845 ATP-dependent DNA helicase DinG cofit 30 29
  Shewanella loihica PV-4 Shew_2483 dinG ATP-dependent DNA helicase DinG (RefSeq) strong 25 55
  Marinobacter adhaerens HP15 HP15_1856 helicase c2 strong 30 29
  Pseudomonas sp. RS175 PFR28_00520 ATP-dependent DNA helicase DinG insig. 29 30
  Dickeya dadantii 3937 DDA3937_RS11240 ATP-dependent DNA helicase insig. 28 31
  Pseudomonas putida KT2440 PP_1125 putative Helicase sig. 29 30
  Pseudomonas sp. DMC3 GFF2161 ATP-dependent DNA helicase DinG cofit 29 29
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 sig. 28 30
  Pseudomonas aeruginosa PA14 IKLFDK_04780 ATP-dependent DNA helicase DinG insig. 29 29
  Shewanella oneidensis MR-1 SO1819 dinG ATP-dependent helicase DinG (NCBI ptt file) strong 24 55
  Pseudomonas fluorescens SBW25 PFLU_RS06540 ATP-dependent DNA helicase DinG insig. 29 30
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06540 ATP-dependent DNA helicase DinG insig. 29 30
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 no data 29 30
  Pseudomonas sp. BP01 JOY50_RS24145 dinG ATP-dependent DNA helicase DinG insig. 29 30
  Pseudomonas simiae WCS417 PS417_06510 ATP-dependent DNA helicase DinG strong 28 30
  Pseudomonas fluorescens FW300-N2C3 AO356_05425 ATP-dependent DNA helicase DinG strong 28 30
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 strong 28 30
  Pseudomonas fluorescens FW300-N2E3 AO353_17020 ATP-dependent DNA helicase DinG strong 28 30
  Pseudomonas syringae pv. syringae B728a Psyr_3856 Helicase c2 sig. 29 30
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3856 Helicase c2 insig. 29 30
  Pseudomonas sp. SVBP6 COO64_RS17020 dinG ATP-dependent DNA helicase DinG cofit 28 30
  Fusobacterium nucleatum SB010 HUW76_04565 ATP-dependent DNA helicase strong 23 28
  Shewanella amazonensis SB2B Sama_1249 dinG ATP-dependent DNA helicase DinG (RefSeq) sig. 28 30
  Shewanella sp. ANA-3 Shewana3_1859 helicase c2 (RefSeq) insig. 24 37
  Kangiella aquimarina DSM 16071 B158DRAFT_2492 Rad3-related DNA helicases cofit 27 28
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2823 DinG family ATP-dependent helicase YoaA insig. 23 72
  Shewanella oneidensis MR-1 SO2081 ATP-dependent helicase, DinG family (NCBI ptt file) insig. 23 37
  Pseudomonas sp. S08-1 OH686_04830 ATP-dependent helicase DinG/Rad3 insig. 28 29
  Rhodanobacter sp. FW510-T8 OKGIIK_02195 dinG helicase insig. 28 35
  Methanococcus maripaludis JJ MMJJ_RS08075 ATP-dependent DNA helicase cofit 47 6
  Methanococcus maripaludis S2 MMP_RS06275 ATP-dependent DNA helicase sig. 47 6
  Vibrio cholerae E7946 ATCC 55056 CSW01_09930 ATP-dependent DNA helicase insig. 26 31
  Shewanella sp. ANA-3 Shewana3_2630 dinG ATP-dependent DNA helicase DinG (RefSeq) cofit 25 30
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19750 ATP-dependent DNA helicase insig. 29 31
  Cupriavidus basilensis FW507-4G11 RR42_RS07580 helicase strong 28 30
  Pseudomonas stutzeri RCH2 Psest_2857 Rad3-related DNA helicases strong 27 30
  Alteromonas macleodii MIT1002 MIT1002_02593 putative ATP-dependent helicase DinG insig. 25 28
  Pectobacterium carotovorum WPP14 HER17_RS11290 ATP-dependent DNA helicase insig. 25 31
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4872 DinG family ATP-dependent helicase YoaA insig. 28 25
  Rhodanobacter denitrificans MT42 LRK55_RS12465 ATP-dependent DNA helicase insig. 28 35
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12765 ATP-dependent DNA helicase insig. 28 35
  Shewanella amazonensis SB2B Sama_1940 ATP-dependent helicase DinG (RefSeq) strong 24 25
  Mycobacterium tuberculosis H37Rv Rv1329c Probable ATP-dependent helicase DinG insig. 26 33
  Rahnella sp. WP5 EX31_RS10615 ATP-dependent DNA helicase insig. 26 28
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1496.1 DinG family ATP-dependent helicase YoaA insig. 29 31
  Escherichia coli BL21 ECD_01778 putative ATP-dependent helicase, DinG family no data 33 12
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01925 putative ATP-dependent helicase DinG insig. 33 12
  Escherichia coli Nissle 1917 ECOLIN_RS10055 ATP-dependent DNA helicase no data 33 12
  Acidovorax sp. GW101-3H11 Ac3H11_2460 DinG family ATP-dependent helicase YoaA insig. 34 11
  Escherichia fergusonii Becca EFB2_02192 putative ATP-dependent DNA helicase YoaA insig. 33 12
  Escherichia coli ECOR27 NOLOHH_17100 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 12
  Escherichia coli ECOR38 HEPCGN_04970 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 12
  Escherichia coli ECRC100 OKFHMN_26580 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 12
  Escherichia coli ECRC101 MCAODC_18830 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 12
  Escherichia coli ECRC102 NIAGMN_01485 yoaA putative ATP-dependent DNA helicase YoaA insig. 33 12
  Escherichia coli ECRC62 BNILDI_15885 yoaA putative ATP-dependent DNA helicase YoaA cofit 33 12
  Escherichia coli ECRC98 JDDGAC_01155 yoaA putative ATP-dependent DNA helicase YoaA cofit 33 12
  Escherichia coli ECRC99 KEDOAH_01530 yoaA putative ATP-dependent DNA helicase YoaA no data 33 12
  Ralstonia solanacearum GMI1000 RS_RS08195 ATP-dependent DNA helicase insig. 29 18
  Ralstonia solanacearum PSI07 RPSI07_RS15960 ATP-dependent DNA helicase no data 26 30
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01530 ATP-dependent DNA helicase insig. 26 30
  Ralstonia solanacearum UW163 UW163_RS14840 ATP-dependent DNA helicase insig. 26 30
  Rahnella sp. WP5 EX31_RS19020 ATP-dependent DNA helicase DinG insig. 26 28
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15830 ATP-dependent DNA helicase insig. 27 35