Homologs of GFF3480 from Sphingobium sp. HT1-2

ATP-dependent RNA helicase Atu1833
SEED: ATP-dependent RNA helicase Atu1833

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3480 ATP-dependent RNA helicase Atu1833 cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1574 Superfamily II DNA and RNA helicases strong 72 99
o Rhizobium sp. OAE497 ABIE40_RS10055 DEAD/DEAH box helicase sig. 63 83
  Agrobacterium fabrum C58 Atu1833 ATP-dependent RNA helicase no data 63 81
o Sinorhizobium meliloti 1021 SMc00522 ATP-dependent RNA helicase strong 60 87
  Bosea sp. OAE506 ABIE41_RS16930 DEAD/DEAH box helicase strong 63 80
  Xanthobacter sp. DMC5 GFF1339 ATP-dependent RNA helicase RhlE insig. 61 81
  Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 62 79
  Azospirillum brasilense Sp245 AZOBR_RS22205 DNA helicase strong 62 79
  Magnetospirillum magneticum AMB-1 AMB_RS07010 ATP-dependent helicase strong 58 89
o Rhodopseudomonas palustris CGA009 TX73_012805 DEAD/DEAH box helicase strong 62 80
  Rhodospirillum rubrum S1H Rru_A2718 DEAD/DEAH box helicase (NCBI) no data 62 79
  Caulobacter crescentus NA1000 CCNA_01923 ATP-dependent RNA helicase strong 61 79
  Caulobacter crescentus NA1000 Δfur CCNA_01923 ATP-dependent RNA helicase cofit 61 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04615 DEAD/DEAH box helicase insig. 57 86
o Dinoroseobacter shibae DFL-12 Dshi_1333 DEAD/DEAH box helicase domain protein (RefSeq) strong 57 81
  Phaeobacter inhibens DSM 17395 PGA1_c10590 putative ATP-dependent RNA helicase RhlE insig. 57 80
o Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 46 87
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 44 96
o Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 46 94
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 46 89
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 45 92
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 48 80
o Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 45 95
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 48 80
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 49 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16115 DEAD/DEAH box helicase sig. 48 80
  Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 49 79
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 49 83
  Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 48 79
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 48 83
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 48 83
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE insig. 48 83
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE insig. 48 83
  Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 48 83
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE insig. 48 83
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE cofit 48 83
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 48 83
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE sig. 48 83
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 48 83
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 48 83
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 47 80
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 48 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 48 85
o Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 48 80
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 46 88
  Rhodopseudomonas palustris CGA009 TX73_019020 DEAD/DEAH box helicase insig. 44 97
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 48 83
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 48 80
o Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 43 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 47 83
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 47 83
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 46 83
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19640 rhlE ATP-dependent RNA helicase RhlE cofit 46 88
  Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 48 83
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 47 83
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 41 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 49 78
o Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 49 78
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 46 83
  Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE cofit 47 83
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 47 83
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 44 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 47 83
  Xanthobacter sp. DMC5 GFF3462 ATP-dependent RNA helicase RhlE insig. 46 79
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 46 83
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 46 83
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 46 83
  Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 46 83
  Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 46 83
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 47 83
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 45 86
  Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 46 83
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 46 83
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 49 78
o Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 49 78
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 47 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16030 DEAD/DEAH box helicase insig. 43 87
  Methylophilus sp. DMC18 GFF1280 ATP-dependent RNA helicase RhlE insig. 45 83
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 44 94
o Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase sig. 48 80
o Pseudomonas aeruginosa PUPa3 DQ20_RS48430 DEAD/DEAH box helicase sig. 48 80
o Pseudomonas aeruginosa MRSN321 DY961_RS13105 DEAD/DEAH box helicase insig. 48 80
  Phocaeicola dorei CL03T12C01 ABI39_RS02170 DEAD/DEAH box helicase insig. 43 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 48 78
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 48 78
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 47 78
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 41 96
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 48 78
  Sinorhizobium meliloti 1021 SM_b20880 ATP-dependent RNA helicase strong 42 95
  Lysobacter sp. OAE881 ABIE51_RS06650 DEAD/DEAH box helicase insig. 43 87
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02855 DEAD/DEAH box helicase sig. 42 92
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 47 78
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 47 79
  Bacteroides stercoris CC31F HMPREF1181_RS03715 DEAD/DEAH box helicase insig. 44 80
  Pectobacterium carotovorum WPP14 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase insig. 44 80
  Bosea sp. OAE506 ABIE41_RS22380 DEAD/DEAH box helicase insig. 46 81
  Rahnella sp. WP5 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase insig. 45 80
  Shewanella oneidensis MR-1 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) strong 44 82
  Shewanella loihica PV-4 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 44 82