Homologs of GFF2416 from Variovorax sp. SCN45

Transcriptional regulator YbhD, LysR family
SEED: LysR family transcriptional regulator YbhD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF2416 Transcriptional regulator YbhD, LysR family insig. 100 100
o Burkholderia phytofirmans PsJN BPHYT_RS09930 LysR family transcriptional regulator insig. 74 97
o Herbaspirillum seropedicae SmR1 HSERO_RS12040 LysR family transcriptional regulator insig. 73 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS04670 LysR family transcriptional regulator insig. 69 96
o Pseudomonas fluorescens FW300-N2C3 AO356_28895 LysR family transcriptional regulator insig. 45 97
o Pseudomonas sp. RS175 PFR28_01942 HTH-type transcriptional regulator CynR strong 45 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4462 LysR family transcriptional regulator YbhD insig. 44 97
o Pseudomonas sp. BP01 JOY50_RS22305 LysR family transcriptional regulator insig. 44 97
o Pseudomonas fluorescens SBW25 PFLU_RS14945 LysR family transcriptional regulator insig. 44 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14945 LysR family transcriptional regulator strong 44 97
o Pseudomonas sp. SVBP6 COO64_RS20555 LysR family transcriptional regulator insig. 44 97
o Pseudomonas putida KT2440 PP_2054 putative DNA-binding transcriptional regulator sig. 44 96
o Azospirillum brasilense Sp245 AZOBR_RS28100 LysR family transcriptional regulator insig. 41 96
o Agrobacterium fabrum C58 Atu4264 LysR family transcriptional regulator strong 41 96
o Dickeya dadantii 3937 DDA3937_RS07805 LysR family transcriptional regulator insig. 39 96
o Cupriavidus basilensis FW507-4G11 RR42_RS28580 LysR family transcriptional regulator insig. 42 96
o Acidovorax sp. GW101-3H11 Ac3H11_4371 LysR family transcriptional regulator YbhD insig. 40 98
o Azospirillum sp. SherDot2 MPMX19_03557 HTH-type transcriptional regulator CynR insig. 40 96
o Bosea sp. OAE506 ABIE41_RS16550 LysR family transcriptional regulator insig. 41 94
  Cupriavidus basilensis FW507-4G11 RR42_RS23045 LysR family transcriptional regulator insig. 41 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2179 LysR family transcriptional regulator YbhD insig. 40 96
o Paraburkholderia graminis OAS925 ABIE53_006109 DNA-binding transcriptional LysR family regulator insig. 40 98
  Burkholderia phytofirmans PsJN BPHYT_RS27430 LysR family transcriptional regulator insig. 40 93
  Paraburkholderia graminis OAS925 ABIE53_005445 DNA-binding transcriptional LysR family regulator insig. 39 100
o Escherichia coli ECOR27 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 36 96
o Escherichia coli BW25113 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) insig. 37 96
o Escherichia fergusonii Becca EFB2_03338 Hydrogen peroxide-inducible genes activator insig. 36 96
o Escherichia coli ECOR38 HEPCGN_01605 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 36 96
o Escherichia coli ECRC100 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 36 96
o Escherichia coli ECRC101 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 36 96
o Escherichia coli ECRC102 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 36 96
o Escherichia coli ECRC62 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 36 96
o Escherichia coli ECRC98 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 36 96
o Escherichia coli ECRC99 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD no data 36 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator insig. 36 96
o Escherichia coli Nissle 1917 ECOLIN_RS04090 LysR family transcriptional regulator no data 36 96
o Pseudomonas simiae WCS417 PS417_07220 LysR family transcriptional regulator insig. 37 96
  Pseudomonas fluorescens SBW25 PFLU_RS07335 LysR family transcriptional regulator insig. 37 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07335 LysR family transcriptional regulator insig. 37 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS08345 LysR family transcriptional regulator insig. 38 96
o Pseudomonas orientalis W4I3 QF045_RS09925 LysR family transcriptional regulator insig. 37 96
o Pseudomonas syringae pv. syringae B728a Psyr_3165 transcriptional regulator, LysR family insig. 37 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3165 transcriptional regulator, LysR family insig. 37 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS38040 LysR family transcriptional regulator insig. 38 98
o Pseudomonas sp. DMC3 GFF1584 Hydrogen peroxide-inducible genes activator cofit 38 96
o Klebsiella michiganensis M5al BWI76_RS04365 LysR family transcriptional regulator insig. 36 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01591 Hydrogen peroxide-inducible genes activator cofit 37 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03335 transcriptional regulator, LysR family insig. 39 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS11315 LysR family transcriptional regulator insig. 39 96
o Pseudomonas fluorescens FW300-N2E3 AO353_26720 LysR family transcriptional regulator insig. 38 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3058 LysR family transcriptional regulator YbhD insig. 35 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02618 transcriptional regulator, LysR family insig. 38 96
  Pantoea sp. MT58 IAI47_10140 LysR family transcriptional regulator insig. 34 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05995 LysR family transcriptional regulator cofit 33 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS23130 LysR family transcriptional regulator insig. 35 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05098 DNA-binding transcriptional regulator, LysR family insig. 34 96
  Burkholderia phytofirmans PsJN BPHYT_RS08035 LysR family transcriptional regulator insig. 35 96
  Enterobacter sp. TBS_079 MPMX20_02971 HTH-type transcriptional regulator CynR insig. 32 91
  Enterobacter asburiae PDN3 EX28DRAFT_0581 Transcriptional regulator insig. 32 91
o Klebsiella pneumoniae MKP103 KDGMDA_24900 LysR family transcriptional regulator insig. 33 90
  Sinorhizobium meliloti 1021 SM_b20123 transcriptional regulator insig. 33 96
  Paraburkholderia graminis OAS925 ABIE53_001823 DNA-binding transcriptional LysR family regulator insig. 34 96
  Rahnella sp. WP5 EX31_RS20145 LysR family transcriptional regulator insig. 32 98
  Herbaspirillum seropedicae SmR1 HSERO_RS07340 LysR family transcriptional regulator insig. 33 97
  Erwinia amylovora T8 OLJFJH_10895 LysR family transcriptional regulator insig. 29 97
  Acidovorax sp. GW101-3H11 Ac3H11_2899 Probable LysR-family transcriptional regulator insig. 33 94
  Serratia liquefaciens MT49 IAI46_18415 LysR family transcriptional regulator insig. 33 96
  Cupriavidus basilensis FW507-4G11 RR42_RS03425 LysR family transcriptional regulator insig. 31 96
  Pseudomonas fluorescens FW300-N2E3 AO353_27930 LysR family transcriptional regulator strong 31 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02200 HTH-type transcriptional regulator CynR cofit 32 95
  Pantoea sp. MT58 IAI47_05470 LysR family transcriptional regulator insig. 30 99
  Pseudomonas fluorescens SBW25 PFLU_RS10590 LysR family transcriptional regulator insig. 31 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10590 LysR family transcriptional regulator sig. 31 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2038 LysR family transcriptional regulator YfeR insig. 31 99
  Klebsiella michiganensis M5al BWI76_RS20610 LysR family transcriptional regulator insig. 30 99
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20015 LysR family transcriptional regulator cofit 29 99
  Pseudomonas orientalis W4I3 QF045_RS21370 LysR family transcriptional regulator cofit 32 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS22410 LysR family transcriptional regulator insig. 33 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2110 LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase insig. 32 94
  Pseudomonas simiae WCS417 PS417_10530 LysR family transcriptional regulator sig. 31 95
  Pseudomonas sp. RS175 PFR28_01326 HTH-type transcriptional regulator GltC sig. 32 94
  Pseudomonas orientalis W4I3 QF045_RS12505 LysR substrate-binding domain-containing protein insig. 31 95
  Pseudomonas fluorescens SBW25 PFLU_RS21345 LysR family transcriptional regulator insig. 31 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21345 LysR family transcriptional regulator sig. 31 98
  Pseudomonas fluorescens FW300-N2C3 AO356_21655 LysR family transcriptional regulator insig. 32 94
  Pseudomonas simiae WCS417 PS417_19375 LysR family transcriptional regulator insig. 31 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05100 LysR family transcriptional regulator insig. 31 97
  Ralstonia solanacearum UW163 UW163_RS08525 LysR family transcriptional regulator insig. 31 97
  Variovorax sp. SCN45 GFF5502 Transcriptional regulator, LysR family insig. 30 96
  Variovorax sp. OAS795 ABID97_RS11710 LysR substrate-binding domain-containing protein no data 36 93
  Variovorax sp. OAS795 ABID97_RS05470 LysR family transcriptional regulator no data 34 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS31250 LysR family transcriptional regulator insig. 30 98
  Klebsiella pneumoniae MKP103 KDGMDA_27455 LysR family transcriptional regulator insig. 30 99
  Variovorax sp. SCN45 GFF6826 Transcriptional regulator, LysR family no data 33 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5832 LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase no data 32 94
  Pseudomonas sp. RS175 PFR28_01830 HTH-type transcriptional regulator CynR insig. 33 80
  Ralstonia solanacearum PSI07 RPSI07_RS12195 LysR family transcriptional regulator insig. 30 97
  Pseudomonas sp. SVBP6 COO64_RS07690 LysR family transcriptional regulator insig. 32 95
  Acidovorax sp. GW101-3H11 Ac3H11_2784 Cyn operon transcriptional activator insig. 31 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04078 HTH-type transcriptional regulator CynR cofit 30 98