Homologs of GFF1845 from Sphingobium sp. HT1-2

hypothetical protein
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF1845 hypothetical protein cofit 100 100
  Sphingobium sp. HT1-2 GFF4047 RNA polymerase ECF-type sigma factor cofit 49 97
  Variovorax sp. SCN45 GFF2401 hypothetical protein insig. 36 83
  Caulobacter crescentus NA1000 CCNA_01032 RNA polymerase ECF-type sigma factor cofit 34 85
  Caulobacter crescentus NA1000 Δfur CCNA_01032 RNA polymerase ECF-type sigma factor cofit 34 85
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0584 RNA polymerase sigma factor, sigma-70 family insig. 35 76
  Sphingobium sp. HT1-2 GFF5276 RNA polymerase, sigma-24 subunit, ECF subfamily cofit 36 77
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 33 73
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02700 RNA polymerase sigma-70 factor insig. 32 66
  Sphingobium sp. HT1-2 GFF5314 hypothetical protein cofit 32 83
  Alteromonas macleodii MIT1002 MIT1002_03920 putative RNA polymerase sigma factor FecI cofit 32 71
  Paraburkholderia sabiae LMG 24235 QEN71_RS22515 RNA polymerase sigma factor insig. 32 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0766 RNA polymerase sigma factor, sigma-70 family insig. 27 79
  Methylophilus sp. DMC18 GFF1837 hypothetical protein insig. 36 64
  Pseudomonas aeruginosa PA14 IKLFDK_24795 RNA polymerase sigma factor insig. 33 80
  Pseudomonas aeruginosa MRSN321 DY961_RS27025 RNA polymerase sigma factor insig. 34 73
  Pseudomonas aeruginosa PUPa3 DQ20_RS31565 RNA polymerase sigma factor sig. 34 73
  Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 34 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1886 FIG006045: Sigma factor, ECF subfamily insig. 34 72
  Paraburkholderia graminis OAS925 ABIE53_002003 RNA polymerase sigma factor (sigma-70 family) sig. 31 84
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 29 82
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 33 66
  Pseudomonas orientalis W4I3 QF045_RS24870 sigma-70 family RNA polymerase sigma factor insig. 34 72
  Pseudomonas sp. BP01 JOY50_RS15495 RNA polymerase sigma factor insig. 33 81
  Pseudomonas syringae pv. syringae B728a Psyr_1107 Sigma-70 region 2 insig. 30 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1107 Sigma-70 region 2 insig. 30 78
  Ralstonia solanacearum GMI1000 RS_RS25030 RNA polymerase sigma factor insig. 35 74
  Pseudomonas sp. DMC3 GFF5154 hypothetical protein insig. 33 72
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 29 82
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15920 sigma-70 family RNA polymerase sigma factor insig. 34 69
  Burkholderia phytofirmans PsJN BPHYT_RS08845 RNA polymerase sigma factor insig. 30 80
  Bacteroides thetaiotaomicron VPI-5482 BT0139 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 33 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2900 FIG006045: Sigma factor, ECF subfamily insig. 32 78
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 29 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor strong 28 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 30 63
  Bacteroides ovatus ATCC 8483 BACOVA_03564 RNA polymerase sigma-70 factor insig. 34 63
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 69
  Pectobacterium carotovorum WPP14 HER17_RS21290 sigma-70 family RNA polymerase sigma factor insig. 30 79
  Ralstonia solanacearum PSI07 RPSI07_RS03580 RNA polymerase sigma factor insig. 30 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23375 RNA polymerase sigma factor insig. 32 74
  Ralstonia solanacearum UW163 UW163_RS16625 RNA polymerase sigma factor insig. 32 74
  Pseudomonas sp. SVBP6 COO64_RS25100 sigma-70 family RNA polymerase sigma factor insig. 31 74
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02444 putative RNA polymerase sigma factor FecI cofit 27 73
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01230 putative RNA polymerase sigma factor FecI insig. 29 74
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 32 71
  Bacteroides ovatus ATCC 8483 BACOVA_01298 RNA polymerase sigma-70 factor insig. 33 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 31 74
  Alteromonas macleodii MIT1002 MIT1002_01237 Sigma-24 cofit 29 67
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 30 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 30 74
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 30 74
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 31 74
  Pseudomonas sp. SVBP6 COO64_RS16380 RNA polymerase sigma factor insig. 35 67
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 33 64
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0532 RNA polymerase sigma factor, sigma-70 family insig. 35 70
  Pseudomonas fluorescens FW300-N2E3 AO353_03435 RNA polymerase subunit sigma-24 insig. 33 78
  Pseudomonas sp. BP01 JOY50_RS11380 RNA polymerase sigma factor insig. 31 78
  Pseudomonas putida KT2440 PP_1008 RNA polymerase subunit sigma-24 strong 31 78
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 31 74
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 31 74
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 31 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19630 RNA polymerase sigma factor sig. 30 80
  Ralstonia solanacearum UW163 UW163_RS19545 RNA polymerase sigma factor insig. 30 80
  Pseudomonas sp. BP01 JOY50_RS10200 sigma-70 family RNA polymerase sigma factor insig. 28 74
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 33 72
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 33 67
  Pseudomonas sp. SVBP6 COO64_RS04525 RNA polymerase sigma factor insig. 32 78
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 30 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 28 80
  Klebsiella michiganensis M5al BWI76_RS11395 RNA polymerase sigma factor FecI strong 28 70
  Ralstonia solanacearum PSI07 RPSI07_RS07750 RNA polymerase sigma factor insig. 33 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 32 78
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 32 64
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04694 ECF RNA polymerase sigma factor SigE cofit 32 78
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 30 70
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09360 RNA polymerase sigma factor insig. 28 73
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 28 71
  Methylophilus sp. DMC18 GFF1078 hypothetical protein insig. 27 81
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 28 74
  Pseudomonas sp. SVBP6 COO64_RS14455 sigma-70 family RNA polymerase sigma factor insig. 32 74
  Sphingobium sp. HT1-2 GFF3691 RNA polymerase ECF-type sigma factor cofit 31 70
  Pseudomonas orientalis W4I3 QF045_RS08105 RNA polymerase sigma factor insig. 30 74
  Agrobacterium fabrum C58 Atu3692 sigma factor sig. 31 81
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 31 61
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3549 RNA polymerase sigma factor, sigma-70 family insig. 31 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2942 RNA polymerase sigma factor, sigma-70 family insig. 26 94
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 32 80
  Methylophilus sp. DMC18 GFF1839 hypothetical protein insig. 29 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 32 64
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00590 RNA polymerase sigma-70 factor insig. 29 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1682 RNA polymerase sigma-70 factor, ECF subfamily insig. 26 74
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0477 RNA polymerase sigma factor, sigma-70 family insig. 34 73
  Variovorax sp. OAS795 ABID97_RS21425 sigma-70 family RNA polymerase sigma factor insig. 33 72
  Pseudomonas fluorescens SBW25 PFLU_RS24340 sigma-70 family RNA polymerase sigma factor insig. 31 72
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24340 sigma-70 family RNA polymerase sigma factor strong 31 72
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 31 64
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 30 70
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 30 70
  Pseudomonas sp. DMC3 GFF1893 putative RNA polymerase sigma factor FecI insig. 30 74