Homologs of DZA65_RS04480 from Dickeya dianthicola ME23

LysR family transcriptional regulator
SEED: LysR-family transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dickeya dianthicola ME23 DZA65_RS04480 LysR family transcriptional regulator insig. 100 100
o Dickeya dianthicola 67-19 HGI48_RS04555 LysR family transcriptional regulator insig. 98 100
o Dickeya dadantii 3937 DDA3937_RS04595 LysR family transcriptional regulator insig. 95 100
o Pectobacterium carotovorum WPP14 HER17_RS17055 LysR family transcriptional regulator insig. 68 97
o Pseudomonas sp. SVBP6 COO64_RS06085 LysR family transcriptional regulator insig. 27 99
o Pseudomonas putida KT2440 PP_3366 Transcriptional regulator, LysR family sig. 27 96
  Pseudomonas sp. BP01 JOY50_RS17080 LysR family transcriptional regulator insig. 27 98
  Pseudomonas sp. BP01 JOY50_RS14160 LysR family transcriptional regulator insig. 27 96
  Pseudomonas sp. BP01 JOY50_RS22305 LysR family transcriptional regulator insig. 28 94
  Pseudomonas fluorescens SBW25 PFLU_RS21120 LysR family transcriptional regulator insig. 27 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21120 LysR family transcriptional regulator strong 27 90
  Pseudomonas putida KT2440 PP_2054 putative DNA-binding transcriptional regulator sig. 28 94
  Dechlorosoma suillum PS Dsui_3396 transcriptional regulator insig. 28 87
  Pseudomonas putida KT2440 PP_5479 transcriptional regulator HTH, LysR family insig. 27 97
  Pseudomonas orientalis W4I3 QF045_RS21080 LysR family transcriptional regulator cofit 26 92
  Shewanella loihica PV-4 Shew_1440 LysR family transcriptional regulator (RefSeq) no data 32 63
  Agrobacterium fabrum C58 Atu4264 LysR family transcriptional regulator strong 26 94
  Pseudomonas fluorescens SBW25 PFLU_RS12705 LysR family transcriptional regulator insig. 30 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12705 LysR family transcriptional regulator insig. 30 63
  Pseudomonas simiae WCS417 PS417_23460 LysR family transcriptional regulator insig. 25 93
  Pseudomonas sp. BP01 JOY50_RS15585 LysR family transcriptional regulator insig. 25 92
  Shewanella loihica PV-4 Shew_3562 LysR family transcriptional regulator (RefSeq) insig. 25 98
  Herbaspirillum seropedicae SmR1 HSERO_RS07340 LysR family transcriptional regulator insig. 29 88
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04052 HTH-type transcriptional regulator CynR cofit 26 94
  Shewanella sp. ANA-3 Shewana3_1691 LysR family transcriptional regulator (RefSeq) insig. 25 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS23130 LysR family transcriptional regulator insig. 25 100
  Pseudomonas simiae WCS417 PS417_19125 LysR family transcriptional regulator sig. 26 90
  Pseudomonas sp. SVBP6 COO64_RS03600 LysR family transcriptional regulator insig. 25 93
  Serratia liquefaciens MT49 IAI46_19970 LysR family transcriptional regulator insig. 28 78
  Herbaspirillum seropedicae SmR1 HSERO_RS05775 LysR family transcriptional regulator insig. 26 95
  Azospirillum sp. SherDot2 MPMX19_03557 HTH-type transcriptional regulator CynR insig. 28 92
  Sphingobium sp. HT1-2 GFF3394 Transcriptional regulator CidR, LysR family insig. 28 84
  Pseudomonas fluorescens SBW25 PFLU_RS14945 LysR family transcriptional regulator insig. 26 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14945 LysR family transcriptional regulator strong 26 92
  Pseudomonas syringae pv. syringae B728a Psyr_0909 transcriptional regulator, LysR family insig. 26 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0909 transcriptional regulator, LysR family insig. 26 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4462 LysR family transcriptional regulator YbhD insig. 26 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01430 LysR family transcriptional regulator cofit 27 89
  Pseudomonas putida KT2440 PP_4627 transcriptional regulator, LysR family sig. 24 92
  Shewanella oneidensis MR-1 SO1916 transcriptional regulator, LysR family (NCBI ptt file) insig. 25 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0203 Transcriptional regulator insig. 24 97
  Cupriavidus basilensis FW507-4G11 RR42_RS28580 LysR family transcriptional regulator insig. 27 87
  Xanthobacter sp. DMC5 GFF1995 Hydrogen peroxide-inducible genes activator no data 25 93
  Dickeya dadantii 3937 DDA3937_RS07805 LysR family transcriptional regulator insig. 26 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_10505 LysR family transcriptional regulator insig. 25 94
  Pseudomonas fluorescens FW300-N2C3 AO356_28895 LysR family transcriptional regulator insig. 25 93
  Azospirillum brasilense Sp245 AZOBR_RS28100 LysR family transcriptional regulator insig. 28 92
  Pseudomonas sp. RS175 PFR28_01830 HTH-type transcriptional regulator CynR insig. 26 92
  Pseudomonas sp. SVBP6 COO64_RS20555 LysR family transcriptional regulator insig. 25 92
  Pseudomonas sp. SVBP6 COO64_RS07690 LysR family transcriptional regulator insig. 25 98
  Azospirillum brasilense Sp245 AZOBR_RS28155 transcriptional regulator LysR family protein no data 32 62
  Paraburkholderia graminis OAS925 ABIE53_001823 DNA-binding transcriptional LysR family regulator insig. 26 81
  Pseudomonas simiae WCS417 PS417_19375 LysR family transcriptional regulator insig. 27 84
  Escherichia fergusonii Becca EFB2_02397 Hca operon transcriptional activator HcaR insig. 28 82
  Escherichia coli ECOR27 NOLOHH_18240 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 28 82
  Escherichia coli ECOR38 HEPCGN_06110 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 28 82
  Escherichia coli ECRC100 OKFHMN_27735 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 28 82
  Escherichia coli ECRC101 MCAODC_17675 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 28 82
  Escherichia coli ECRC102 NIAGMN_00340 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 28 82
  Escherichia coli ECRC62 BNILDI_17030 ynfL Uncharacterized HTH-type transcriptional regulator YnfL cofit 28 82
  Escherichia coli ECRC98 JDDGAC_02325 ynfL Uncharacterized HTH-type transcriptional regulator YnfL insig. 28 82
  Escherichia coli ECRC99 KEDOAH_00370 ynfL Uncharacterized HTH-type transcriptional regulator YnfL no data 28 82
  Escherichia coli Nissle 1917 ECOLIN_RS08910 LysR family transcriptional regulator no data 28 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03809 transcriptional regulator, LysR family insig. 28 92
  Escherichia coli BL21 ECD_01564 LysR family putative transcriptional regulator no data 28 82
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02131 Hca operon transcriptional activator HcaR insig. 28 82
  Escherichia coli BW25113 b1595 ynfL predicted DNA-binding transcriptional regulator (NCBI) sig. 28 82
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1786 LysR family transcriptional regulator YnfL insig. 27 82
  Burkholderia phytofirmans PsJN BPHYT_RS30315 LysR family transcriptional regulator insig. 27 90
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05995 LysR family transcriptional regulator cofit 26 91
  Burkholderia phytofirmans PsJN BPHYT_RS08035 LysR family transcriptional regulator insig. 25 90
  Cupriavidus basilensis FW507-4G11 RR42_RS28030 hypothetical protein insig. 29 82
  Herbaspirillum seropedicae SmR1 HSERO_RS18300 LysR family transcriptional regulator insig. 26 87
  Pantoea sp. MT58 IAI47_10140 LysR family transcriptional regulator insig. 26 91
  Klebsiella pneumoniae MKP103 KDGMDA_23755 transcriptional regulator insig. 31 70
  Pseudomonas syringae pv. syringae B728a Psyr_0767 transcriptional regulator, LysR family insig. 28 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0767 transcriptional regulator, LysR family insig. 28 91
  Pseudomonas sp. RS175 PFR28_01942 HTH-type transcriptional regulator CynR strong 25 93
  Rhizobium sp. OAE497 ABIE40_RS01530 LysR family transcriptional regulator insig. 28 89
  Klebsiella pneumoniae MKP103 KDGMDA_09380 DNA-binding transcriptional regulator OxyR cofit 24 95
  Escherichia coli BL21 ECD_03846 oxidative and nitrosative stress transcriptional regulator strong 24 97
  Escherichia fergusonii Becca EFB2_04651 Hydrogen peroxide-inducible genes activator insig. 24 97
  Escherichia coli ECOR27 NOLOHH_05700 oxyR DNA-binding transcriptional regulator OxyR insig. 24 97
  Escherichia coli ECOR38 HEPCGN_12210 oxyR DNA-binding transcriptional regulator OxyR strong 24 97
  Escherichia coli ECRC100 OKFHMN_13565 oxyR DNA-binding transcriptional regulator OxyR cofit 24 97
  Escherichia coli ECRC101 MCAODC_04065 oxyR DNA-binding transcriptional regulator OxyR insig. 24 97
  Escherichia coli ECRC102 NIAGMN_11315 oxyR DNA-binding transcriptional regulator OxyR cofit 24 97
  Escherichia coli ECRC62 BNILDI_05825 oxyR DNA-binding transcriptional regulator OxyR insig. 24 97
  Escherichia coli ECRC98 JDDGAC_17190 oxyR DNA-binding transcriptional regulator OxyR insig. 24 97
  Escherichia coli ECRC99 KEDOAH_14595 oxyR DNA-binding transcriptional regulator OxyR no data 24 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04089 Hydrogen peroxide-inducible genes activator insig. 24 97
  Escherichia coli Nissle 1917 ECOLIN_RS22870 DNA-binding transcriptional regulator OxyR strong 24 97
  Escherichia coli BW25113 b3961 oxyR DNA-binding transcriptional dual regulator (NCBI) strong 24 97
  Bosea sp. OAE506 ABIE41_RS20660 LysR substrate-binding domain-containing protein insig. 27 86
  Pseudomonas orientalis W4I3 QF045_RS21370 LysR family transcriptional regulator cofit 26 84
  Pseudomonas fluorescens SBW25 PFLU_RS21345 LysR family transcriptional regulator insig. 25 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21345 LysR family transcriptional regulator sig. 25 84
  Pseudomonas fluorescens SBW25 PFLU_RS07335 LysR family transcriptional regulator insig. 26 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07335 LysR family transcriptional regulator insig. 26 85
  Enterobacter asburiae PDN3 EX28DRAFT_4424 Transcriptional regulator no data 24 97