Homologs of CSW01_19490 from Vibrio cholerae E7946 ATCC 55056

GGDEF domain-containing protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_19490 GGDEF domain-containing protein cofit 100 100
o Shewanella sp. ANA-3 Shewana3_0376 diguanylate cyclase/phosphodiesterase (RefSeq) sig. 32 100
o Shewanella oneidensis MR-1 SO4323 GGDEF domain protein (NCBI ptt file) cofit 31 100
o Shewanella loihica PV-4 Shew_0307 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 30 100
o Shewanella amazonensis SB2B Sama_3264 putative diguanylate phosphodiesterase (RefSeq) sig. 30 100
o Pseudomonas fluorescens FW300-N2E3 AO353_11170 hypothetical protein strong 26 99
o Pseudomonas sp. DMC3 GFF4286 hypothetical protein cofit 26 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1802 Membrane bound c-di-GMP receptor LapD insig. 26 99
o Pseudomonas sp. RS175 PFR28_04783 hypothetical protein strong 26 100
o Pseudomonas sp. SVBP6 COO64_RS26435 lapD cyclic di-GMP receptor LapD cofit 26 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3983 Membrane bound c-di-GMP receptor LapD strong 26 100
o Pseudomonas fluorescens FW300-N2C3 AO356_10580 hypothetical protein cofit 25 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00514 RNase E specificity factor CsrD cofit 25 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4428 Membrane bound c-di-GMP receptor LapD insig. 26 98
o Alteromonas macleodii MIT1002 MIT1002_01618 Cyclic di-GMP phosphodiesterase Gmr insig. 25 100
o Pseudomonas orientalis W4I3 QF045_RS03595 EAL domain-containing protein cofit 25 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_546 Membrane bound c-di-GMP receptor LapD insig. 26 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3529 Membrane bound c-di-GMP receptor LapD insig. 25 98
o Pseudomonas segetis P6 ACVTMO_RS14575 lapD cyclic di-GMP receptor LapD insig. 24 100
o Pseudomonas sp. BP01 JOY50_RS28180 lapD cyclic di-GMP receptor LapD no data 25 100
o Pseudomonas sp. S08-1 OH686_20650 Membrane bound c-di-GMP receptor LapD insig. 24 100
  Pseudomonas fluorescens FW300-N2E3 AO353_18415 hypothetical protein insig. 24 97
o Pseudomonas putida KT2440 PP_0165 GGDEF domain protein strong 24 100
o Pseudomonas aeruginosa PA14 IKLFDK_06810 Diguanylate cyclase/phosphodiesterase insig. 24 98
o Acidovorax sp. GW101-3H11 Ac3H11_2106 Membrane bound c-di-GMP receptor LapD insig. 26 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS47045 EAL domain-containing protein insig. 24 98
o Pseudomonas aeruginosa MRSN321 DY961_RS05745 EAL domain-containing protein insig. 24 98
o Pectobacterium carotovorum WPP14 HER17_RS05880 EAL domain-containing protein cofit 23 100
o Pseudomonas stutzeri RCH2 Psest_1864 diguanylate cyclase (GGDEF) domain insig. 23 100
o Marinobacter adhaerens HP15 HP15_3218 diguanylate cyclase/phosphodiesterase insig. 25 97
  Shewanella amazonensis SB2B Sama_1829 putative diguanylate phosphodiesterase (RefSeq) insig. 25 64
  Shewanella loihica PV-4 Shew_2065 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 22 78
  Shewanella sp. ANA-3 Shewana3_2167 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 24 66
  Shewanella oneidensis MR-1 SO2507 GGDEF domain protein (NCBI ptt file) insig. 24 66
o Methylophilus sp. DMC18 GFF459 hypothetical protein insig. 23 99
  Azospirillum sp. SherDot2 MPMX19_05708 hypothetical protein insig. 23 75
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 24 63
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 25 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 25 63
  Paraburkholderia sabiae LMG 24235 QEN71_RS10745 EAL domain-containing protein insig. 21 76
  Shewanella loihica PV-4 Shew_3125 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 25 62
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 23 64
  Alteromonas macleodii MIT1002 MIT1002_01290 Bacteriophytochrome cph2 cofit 24 64
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 23 69
  Pseudomonas syringae pv. syringae B728a Psyr_3942 diguanylate cyclase/phosphodiesterase insig. 22 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3942 diguanylate cyclase/phosphodiesterase insig. 22 78
  Marinobacter adhaerens HP15 HP15_2352 sensory box sensor/GGDEF/EAL domain protein insig. 23 94
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 25 63
  Pseudomonas orientalis W4I3 QF045_RS26570 EAL domain-containing protein insig. 25 64
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 23 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_217 Sensory box/GGDEF family protein insig. 25 65
  Azospirillum sp. SherDot2 MPMX19_04839 hypothetical protein insig. 25 64
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 24 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 24 64
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 24 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 24 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_02100 RNase E specificity factor CsrD cofit 23 75
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 25 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 25 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 25 64
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05007 hypothetical protein cofit 24 64
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 24 64
  Pseudomonas sp. S08-1 OH686_11085 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 23 62
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1972.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 22 73
  Alteromonas macleodii MIT1002 MIT1002_01559 Cyclic di-GMP phosphodiesterase YfgF insig. 21 100
  Pseudomonas orientalis W4I3 QF045_RS00285 EAL domain-containing protein cofit 24 64
  Paraburkholderia sabiae LMG 24235 QEN71_RS13125 EAL domain-containing protein insig. 24 60
  Pseudomonas stutzeri RCH2 Psest_1163 diguanylate cyclase (GGDEF) domain strong 22 76
  Pseudomonas aeruginosa MRSN321 DY961_RS06515 diguanylate cyclase sig. 23 72
  Pseudomonas aeruginosa PA14 IKLFDK_05475 diguanylate cyclase insig. 23 72
  Pseudomonas aeruginosa PUPa3 DQ20_RS46285 diguanylate cyclase cofit 23 72
  Pseudomonas fluorescens SBW25 PFLU_RS02265 EAL domain-containing protein insig. 25 65
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02265 EAL domain-containing protein strong 25 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 24 64
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 25 64
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 25 63
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 25 65
  Kangiella aquimarina DSM 16071 B158DRAFT_2394 diguanylate cyclase (GGDEF) domain strong 25 56
  Pseudomonas simiae WCS417 PS417_02210 diguanylate cyclase strong 25 65
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 25 63
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 22 63
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 24 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1479 Sensory box/GGDEF family protein insig. 25 65
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 24 64
  Cupriavidus basilensis FW507-4G11 RR42_RS10125 diguanylate phosphodiesterase insig. 24 63
  Shewanella amazonensis SB2B Sama_3627 signal transduction protein (RefSeq) insig. 24 65
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 23 64
  Pseudomonas syringae pv. syringae B728a Psyr_1159 PAS:GGDEF insig. 23 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1159 PAS:GGDEF insig. 23 65
  Alteromonas macleodii MIT1002 MIT1002_00062 Bacteriophytochrome cph2 insig. 22 68
  Pseudomonas orientalis W4I3 QF045_RS05270 EAL domain-containing protein cofit 25 65
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 24 65
  Pseudomonas orientalis W4I3 QF045_RS20750 PAS domain S-box protein insig. 24 64
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03950 hypothetical protein cofit 24 64
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 24 64
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 24 64
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 23 64
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 24 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 24 64
  Pseudomonas aeruginosa MRSN321 DY961_RS23425 morA;inference=COORDINATES cyclic di-GMP receptor MorA insig. 23 68