Homologs of CSW01_03675 from Vibrio cholerae E7946 ATCC 55056

norspermidine sensor
SEED: Predicted polyamine sensor NspS, involved in biofilm formation
KEGG: putative spermidine/putrescine transport system substrate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_03675 norspermidine sensor insig. 100 100
o Sinorhizobium meliloti 1021 SMc00991 putrescine-binding periplasmic protein insig. 34 94
o Pseudomonas stutzeri RCH2 Psest_3900 Spermidine/putrescine-binding periplasmic protein cofit 34 90
  Pseudomonas stutzeri RCH2 Psest_4284 Spermidine/putrescine-binding periplasmic protein strong 29 87
  Pseudomonas aeruginosa PA14 IKLFDK_23955 Putrescine-binding periplasmic protein SpuD insig. 29 91
  Pseudomonas stutzeri RCH2 Psest_4283 Spermidine/putrescine-binding periplasmic protein strong 28 85
  Pseudomonas putida KT2440 PP_5180 spermidine/putrescine ABC transporter - periplasmic subunit sig. 27 92
  Pseudomonas sp. BP01 JOY50_RS22350 polyamine ABC transporter substrate-binding protein insig. 31 82
  Pseudomonas sp. DMC3 GFF286 Spermidine-binding periplasmic protein SpuE cofit 27 91
  Pseudomonas sp. BP01 JOY50_RS22345 polyamine ABC transporter substrate-binding protein insig. 26 92
  Pseudomonas aeruginosa PA14 IKLFDK_23950 Spermidine-binding periplasmic protein SpuE cofit 27 88
  Pseudomonas putida KT2440 PP_5181 spermidine/putrescine ABC transporter - periplasmic subunit strong 31 82
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3073 Putrescine ABC transporter, periplasmic putrescine-binding protein insig. 26 86
  Pseudomonas aeruginosa PA14 IKLFDK_06695 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 26 87
  Sinorhizobium meliloti 1021 SMc00770 putrescine-binding periplasmic protein sig. 29 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_929 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) strong 28 86
  Marinobacter adhaerens HP15 HP15_940 putrescine ABC transporter, periplasmic putrescine-binding protein cofit 28 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4248 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 27 89
  Shewanella loihica PV-4 Shew_0973 extracellular solute-binding protein (RefSeq) sig. 26 86
  Pseudomonas sp. S08-1 OH686_11465 Putrescine ABC transporter putrescine-binding protein PotF cofit 30 85
  Pseudomonas sp. SVBP6 COO64_RS00885 polyamine ABC transporter substrate-binding protein insig. 26 92
  Bosea sp. OAE506 ABIE41_RS21650 polyamine ABC transporter substrate-binding protein insig. 28 82
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4895 Putrescine ABC transporter, periplasmic putrescine-binding protein insig. 25 86
  Pseudomonas sp. SVBP6 COO64_RS00890 polyamine ABC transporter substrate-binding protein insig. 29 86
  Dickeya dadantii 3937 DDA3937_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 29 85
  Pseudomonas sp. RS175 PFR28_04294 Spermidine-binding periplasmic protein SpuE insig. 27 87
  Pseudomonas syringae pv. syringae B728a Psyr_2513 extracellular solute-binding protein, family 1 insig. 26 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2513 extracellular solute-binding protein, family 1 insig. 26 94
  Pseudomonas putida KT2440 PP_3845 putrescine-binding periplasmic protein insig. 28 85
  Dickeya dianthicola ME23 DZA65_RS09790 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 28 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2413 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 26 93
  Caulobacter crescentus NA1000 CCNA_03239 spermidine/putrescine-binding protein strong 25 89
  Caulobacter crescentus NA1000 Δfur CCNA_03239 spermidine/putrescine-binding protein cofit 25 89
  Pectobacterium carotovorum WPP14 HER17_RS11675 spermidine/putrescine ABC transporter substrate-binding protein PotD insig. 24 82
  Pseudomonas fluorescens FW300-N2C3 AO356_13155 spermidine/putrescine ABC transporter substrate-binding protein strong 29 84
  Dickeya dianthicola 67-19 HGI48_RS09480 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 28 85
  Xanthobacter sp. DMC5 GFF1739 Putrescine-binding periplasmic protein SpuD insig. 25 86
  Pseudomonas sp. DMC3 GFF1624 Putrescine-binding periplasmic protein SpuD cofit 28 86
  Shewanella sp. ANA-3 Shewana3_3097 extracellular solute-binding protein (RefSeq) strong 25 85
  Pseudomonas fluorescens FW300-N2E3 AO353_08575 ABC transporter substrate-binding protein strong 27 86
  Shewanella oneidensis MR-1 SO1270 polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) strong 25 86
  Pseudomonas fluorescens FW300-N2E3 AO353_25435 spermidine/putrescine ABC transporter substrate-binding protein insig. 24 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_19630 spermidine/putrescine ABC transporter substrate-binding protein cofit 23 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4349 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) sig. 28 86
  Pseudomonas fluorescens FW300-N2E3 AO353_24775 ABC transporter substrate-binding protein insig. 28 81
  Pseudomonas aeruginosa PA14 IKLFDK_13620 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 25 88
  Pseudomonas simiae WCS417 PS417_13430 spermidine/putrescine ABC transporter substrate-binding protein insig. 24 85
  Pseudomonas sp. DMC3 GFF1570 Putrescine-binding periplasmic protein SpuD insig. 27 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1566 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) insig. 24 86
  Pseudomonas sp. RS175 PFR28_04295 Putrescine-binding periplasmic protein SpuD strong 29 84
  Pseudomonas sp. S08-1 OH686_11460 Putrescine ABC transporter putrescine-binding protein PotF cofit 27 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2260 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 26 86
  Pseudomonas fluorescens FW300-N2E3 AO353_28325 ABC transporter substrate-binding protein insig. 25 87
  Pseudomonas fluorescens SBW25 PFLU_RS15360 polyamine ABC transporter substrate-binding protein insig. 24 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15360 polyamine ABC transporter substrate-binding protein insig. 24 85
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF758 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 28 85
  Pseudomonas fluorescens FW300-N2C3 AO356_13160 putrescine ABC transporter, substrate-binding component (from data) strong 26 86
  Pseudomonas sp. SVBP6 COO64_RS07835 polyamine ABC transporter substrate-binding protein insig. 26 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_07140 spermidine/putrescine ABC transporter substrate-binding protein insig. 24 91
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2206.1 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 29 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4514 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) strong 26 86
  Pseudomonas simiae WCS417 PS417_27120 ABC transporter substrate-binding protein sig. 25 87
  Pseudomonas sp. DMC3 GFF2732 Spermidine-binding periplasmic protein SpuE cofit 27 84
  Pseudomonas fluorescens SBW25 PFLU_RS12535 polyamine ABC transporter substrate-binding protein insig. 26 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12535 polyamine ABC transporter substrate-binding protein insig. 26 94
  Agrobacterium fabrum C58 Atu0609 ABC transporter, substrate binding protein (putrescine) sig. 24 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2259 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) sig. 29 87
  Pseudomonas aeruginosa PA14 IKLFDK_13005 Putrescine/agmatine-binding protein cofit 26 88
  Pseudomonas fluorescens SBW25 PFLU_RS28775 polyamine ABC transporter substrate-binding protein strong 29 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28775 polyamine ABC transporter substrate-binding protein strong 29 80
  Pseudomonas syringae pv. syringae B728a Psyr_4865 extracellular solute-binding protein, family 1 insig. 27 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4865 extracellular solute-binding protein, family 1 insig. 27 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_928 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) strong 27 87
  Pseudomonas sp. S08-1 OH686_13260 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) insig. 26 81
  Pseudomonas sp. DMC3 GFF2855 Spermidine-binding periplasmic protein SpuE insig. 25 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3222 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) insig. 27 86
  Klebsiella michiganensis M5al BWI76_RS09460 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 27 92
  Pectobacterium carotovorum WPP14 HER17_RS12500 spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 29 85
  Escherichia coli BW25113 b0854 potF putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) sig. 28 85
  Pseudomonas fluorescens FW300-N2E3 AO353_08580 spermidine/putrescine ABC transporter substrate-binding protein strong 27 84
  Pseudomonas sp. SVBP6 COO64_RS20975 polyamine ABC transporter substrate-binding protein insig. 27 80
  Pseudomonas syringae pv. syringae B728a Psyr_4864 extracellular solute-binding protein, family 1 insig. 25 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4864 extracellular solute-binding protein, family 1 insig. 25 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU0095 potD-1 polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR) insig. 25 85
  Escherichia coli ECOR38 HEPCGN_02070 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 28 85
  Rhodopseudomonas palustris CGA009 TX73_010380 polyamine ABC transporter substrate-binding protein sig. 26 84
  Pseudomonas putida KT2440 PP_5341 putrescine-binding periplasmic protein insig. 27 88
  Escherichia coli ECOR27 NOLOHH_22330 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 28 85
  Escherichia coli ECRC62 BNILDI_20585 potF spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 28 85
  Escherichia coli Nissle 1917 ECOLIN_RS04550 spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 28 85
  Escherichia coli BL21 ECD_00859 putrescine ABC transporter periplasmic binding protein insig. 28 85
  Escherichia fergusonii Becca EFB2_03207 Putrescine-binding periplasmic protein insig. 28 85
  Escherichia coli ECRC100 OKFHMN_05960 potF spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 28 85
  Escherichia coli ECRC101 MCAODC_25175 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 28 85
  Escherichia coli ECRC102 NIAGMN_04005 potF spermidine/putrescine ABC transporter substrate-binding protein PotF insig. 28 85
  Escherichia coli ECRC98 JDDGAC_09595 potF spermidine/putrescine ABC transporter substrate-binding protein PotF cofit 28 85
  Escherichia coli ECRC99 KEDOAH_21950 potF spermidine/putrescine ABC transporter substrate-binding protein PotF no data 28 85
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02814 Putrescine-binding periplasmic protein insig. 28 85
  Pseudomonas sp. DMC3 GFF287 Putrescine-binding periplasmic protein SpuD cofit 28 90
  Burkholderia phytofirmans PsJN BPHYT_RS30640 ABC transporter substrate-binding protein insig. 23 91