Homologs of CSW01_03475 from Vibrio cholerae E7946 ATCC 55056

ATP-dependent RNA helicase SrmB
SEED: ATP-dependent RNA helicase SrmB
KEGG: ATP-dependent RNA helicase SrmB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_03475 ATP-dependent RNA helicase SrmB cofit 100 100
o Pantoea sp. MT58 IAI47_04835 ATP-dependent RNA helicase SrmB strong 60 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14725 ATP-dependent RNA helicase SrmB strong 60 99
o Erwinia amylovora T8 OLJFJH_10200 ATP-dependent RNA helicase SrmB strong 59 97
o Rahnella sp. WP5 EX31_RS21785 ATP-dependent RNA helicase SrmB cofit 60 96
o Serratia liquefaciens MT49 IAI46_19600 ATP-dependent RNA helicase SrmB strong 58 99
o Klebsiella michiganensis M5al BWI76_RS21370 ATP-dependent RNA helicase SrmB insig. 62 93
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_01260 srmB ATP-dependent RNA helicase SrmB strong 60 97
o Erwinia tracheiphila SCR3 LU632_RS15440 srmB ATP-dependent RNA helicase SrmB cofit 60 97
o Pectobacterium carotovorum WPP14 HER17_RS05765 ATP-dependent RNA helicase SrmB cofit 59 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2104 ATP-dependent RNA helicase SrmB insig. 62 93
o Enterobacter asburiae PDN3 EX28DRAFT_0069 Superfamily II DNA and RNA helicases insig. 62 93
o Enterobacter sp. TBS_079 MPMX20_03447 ATP-dependent RNA helicase SrmB strong 61 95
o Alteromonas macleodii MIT1002 MIT1002_00941 ATP-dependent RNA helicase SrmB no data 62 89
o Dickeya dadantii 3937 DDA3937_RS15780 ATP-dependent RNA helicase SrmB strong 62 89
o Escherichia coli ECRC62 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB cofit 61 100
o Klebsiella pneumoniae MKP103 KDGMDA_28495 ATP-dependent RNA helicase SrmB cofit 61 97
o Escherichia coli BL21 ECD_02470 ATP-dependent RNA helicase strong 63 93
o Escherichia fergusonii Becca EFB2_01320 ATP-dependent RNA helicase SrmB strong 63 93
o Escherichia coli ECOR27 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB strong 63 93
o Escherichia coli ECOR38 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB strong 63 93
o Escherichia coli ECRC100 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB cofit 63 93
o Escherichia coli ECRC101 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB strong 63 93
o Escherichia coli ECRC102 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB cofit 63 93
o Escherichia coli ECRC98 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB strong 63 93
o Escherichia coli ECRC99 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB no data 63 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01131 ATP-dependent RNA helicase SrmB strong 63 93
o Escherichia coli Nissle 1917 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB sig. 63 93
o Dickeya dianthicola ME23 DZA65_RS16945 ATP-dependent RNA helicase SrmB cofit 61 90
o Escherichia coli BW25113 b2576 srmB ATP-dependent RNA helicase (NCBI) strong 63 93
o Dickeya dianthicola 67-19 HGI48_RS15865 ATP-dependent RNA helicase SrmB cofit 61 90
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 57 90
o Shewanella sp. ANA-3 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) strong 57 90
o Shewanella oneidensis MR-1 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) strong 57 90
o Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 57 90
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 46 89
o Azospirillum sp. SherDot2 MPMX19_06125 RNA helicase CrhR insig. 47 89
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 46 89
  Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 43 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS06275 DEAD/DEAH box helicase insig. 42 90
  Pseudomonas syringae pv. syringae B728a Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal sig. 41 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 41 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4451 ATP-dependent RNA helicase SrmB strong 41 98
  Burkholderia phytofirmans PsJN BPHYT_RS12280 RNA helicase insig. 40 90
  Paraburkholderia graminis OAS925 ABIE53_002535 superfamily II DNA/RNA helicase strong 40 90
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 40 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14000 ATP-dependent helicase insig. 41 89
  Ralstonia solanacearum UW163 UW163_RS15810 ATP-dependent helicase insig. 41 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00581 Superfamily II DNA and RNA helicase no data 41 90
  Pseudomonas sp. DMC3 GFF2355 ATP-dependent RNA helicase RhlE no data 41 96
  Pseudomonas sp. BP01 JOY50_RS01230 DEAD/DEAH box helicase insig. 41 97
  Shewanella oneidensis MR-1 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 40 98
  Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 42 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 41 97
  Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 41 96
o Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 41 97
  Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 42 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS09700 DEAD/DEAH box helicase strong 40 88
  Pseudomonas stutzeri RCH2 Psest_1627 Superfamily II DNA and RNA helicases strong 42 90
  Ralstonia solanacearum PSI07 RPSI07_RS19465 ATP-dependent helicase insig. 40 88
  Ralstonia solanacearum GMI1000 RS_RS04735 RNA helicase insig. 40 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 42 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04249 ATP-dependent RNA helicase RhlE insig. 42 90
  Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 42 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 42 90
  Pseudomonas orientalis W4I3 QF045_RS22365 DEAD/DEAH box helicase insig. 42 90
  Pseudomonas sp. SVBP6 COO64_RS21930 DEAD/DEAH box helicase insig. 41 90
  Kangiella aquimarina DSM 16071 B158DRAFT_0320 Superfamily II DNA and RNA helicases insig. 41 90
  Pseudomonas sp. S08-1 OH686_05415 ATP-dependent RNA helicase SrmB cofit 42 90
  Kangiella aquimarina DSM 16071 B158DRAFT_1312 Superfamily II DNA and RNA helicases insig. 40 88
  Pseudomonas aeruginosa PA14 IKLFDK_17790 RNA helicase insig. 44 96
  Herbaspirillum seropedicae SmR1 HSERO_RS17155 RNA helicase insig. 39 89
  Shewanella sp. ANA-3 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 40 89
  Shewanella amazonensis SB2B Sama_0808 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 42 91
  Shewanella sp. ANA-3 Shewana3_2988 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 41 88
  Shewanella loihica PV-4 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 41 89
  Pseudomonas segetis P6 MPMX49_03247 ATP-dependent RNA helicase RhlE no data 42 90
  Shewanella oneidensis MR-1 SO1383 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) strong 40 88
  Marinobacter adhaerens HP15 HP15_2099 DEAD/DEAH box helicase domain protein sig. 40 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS41480 DEAD/DEAH box helicase no data 44 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE strong 42 89
  Pseudomonas aeruginosa MRSN321 DY961_RS15590 DEAD/DEAH box helicase strong 44 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 38 99
  Shewanella amazonensis SB2B Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) no data 40 89
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase sig. 40 95
  Rhizobium sp. OAE497 ABIE40_RS10055 DEAD/DEAH box helicase sig. 41 87
  Agrobacterium fabrum C58 Atu1833 ATP-dependent RNA helicase no data 40 87
  Agrobacterium fabrum C58 Atu2333 ATP-dependent RNA helicase strong 39 87
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 42 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_14335 ATP-dependent helicase insig. 39 90
  Pseudomonas aeruginosa MRSN321 DY961_RS13105 DEAD/DEAH box helicase insig. 43 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 39 87
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 41 89
  Bosea sp. OAE506 ABIE41_RS22380 DEAD/DEAH box helicase insig. 43 86
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 38 93
  Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase sig. 42 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS48430 DEAD/DEAH box helicase sig. 42 90
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 41 90
  Dinoroseobacter shibae DFL-12 Dshi_1333 DEAD/DEAH box helicase domain protein (RefSeq) strong 40 86
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 39 92