Homologs of CA264_17280 from Pontibacter actiniarum KMM 6156, DSM 19842

rRNA maturation RNase YbeY
SEED: Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly

75 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17280 rRNA maturation RNase YbeY no data 100 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1058 metalloprotein, YbeY/UPF0054 family no data 51 96
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20570 rRNA maturation RNase YbeY no data 51 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21210 rRNA maturation RNase YbeY no data 50 96
o Bacteroides ovatus ATCC 8483 BACOVA_00893 translation metalloprotein YbeY no data 38 96
o Bacteroides thetaiotaomicron VPI-5482 BT3283 conserved hypothetical protein with conserved domain (NCBI ptt file) no data 37 96
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS06270 rRNA maturation RNase YbeY no data 37 95
o Phocaeicola dorei CL03T12C01 ABI39_RS05390 rRNA maturation RNase YbeY no data 39 95
o Bacteroides stercoris CC31F HMPREF1181_RS02110 rRNA maturation RNase YbeY no data 38 96
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11550 rRNA maturation RNase YbeY no data 38 95
  Fusobacterium nucleatum SB010 HUW76_04575 rRNA maturation RNase YbeY no data 37 80
  Azospirillum sp. SherDot2 MPMX19_02513 Endoribonuclease YbeY no data 30 64
  Agrobacterium fabrum C58 Atu0358 hypothetical protein no data 35 56
  Enterobacter asburiae PDN3 EX28DRAFT_2312 probable rRNA maturation factor YbeY no data 30 76
  Synechococcus elongatus PCC 7942 Synpcc7942_0402 hypothetical protein insig. 28 81
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1609 probable rRNA maturation factor YbeY no data 31 64
  Rhizobium sp. OAE497 ABIE40_RS01695 rRNA maturation RNase YbeY no data 27 71
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4576 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly no data 30 80
  Sinorhizobium meliloti 1021 SMc01113 hypothetical protein no data 28 58
  Enterobacter sp. TBS_079 MPMX20_01309 Endoribonuclease YbeY no data 30 76
  Klebsiella michiganensis M5al BWI76_RS08125 rRNA maturation RNase YbeY no data 31 66
  Phaeobacter inhibens DSM 17395 PGA1_c04750 metalloprotein, YbeY/UPF0054 family no data 28 66
  Cupriavidus basilensis FW507-4G11 RR42_RS02845 16S rRNA maturation RNase YbeY no data 27 78
  Alteromonas macleodii MIT1002 MIT1002_01478 Endoribonuclease YbeY no data 25 82
  Escherichia coli ECRC62 BNILDI_21620 ybeY rRNA maturation RNase YbeY no data 30 76
  Castellaniella sp019104865 MT123 ABCV34_RS15335 rRNA maturation RNase YbeY no data 24 85
  Escherichia coli BL21 ECD_00627 ssRNA-specific endoribonuclease; 16S rRNA 3 no data 30 69
  Escherichia coli ECRC101 OKFHMN_07235 ybeY rRNA maturation RNase YbeY no data 30 69
  Escherichia coli ECRC101 MCAODC_26450 ybeY rRNA maturation RNase YbeY no data 30 69
  Escherichia coli ECRC102 NIAGMN_05290 ybeY rRNA maturation RNase YbeY no data 30 69
  Escherichia coli ECRC98 JDDGAC_10880 ybeY rRNA maturation RNase YbeY no data 30 69
  Escherichia coli ECRC99 KEDOAH_20735 ybeY rRNA maturation RNase YbeY no data 30 69
  Pseudomonas fluorescens SBW25 PFLU_RS26565 rRNA maturation RNase YbeY insig. 30 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26565 rRNA maturation RNase YbeY insig. 30 83
  Escherichia fergusonii Becca EFB2_03440 Endoribonuclease YbeY no data 30 69
  Escherichia coli ECOR27 NOLOHH_23615 ybeY rRNA maturation RNase YbeY no data 30 69
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03053 Endoribonuclease YbeY no data 30 69
  Escherichia coli Nissle 1917 ECOLIN_RS03545 rRNA maturation RNase YbeY no data 30 69
  Escherichia coli BW25113 b0659 ybeY hypothetical protein (NCBI) no data 30 69
  Rhodopseudomonas palustris CGA009 TX73_002315 rRNA maturation RNase YbeY strong 30 60
  Escherichia coli ECOR38 HEPCGN_00995 ybeY rRNA maturation RNase YbeY no data 30 69
  Bosea sp. OAE506 ABIE41_RS04505 rRNA maturation RNase YbeY no data 26 71
  Pantoea sp. MT58 IAI47_13955 rRNA maturation RNase YbeY no data 28 66
  Magnetospirillum magneticum AMB-1 AMB_RS22595 endoribonuclease YbeY no data 26 56
  Acinetobacter radioresistens SK82 MPMX26_02669 Endoribonuclease YbeY no data 32 48
  Lysobacter sp. OAE881 ABIE51_RS15505 rRNA maturation RNase YbeY no data 25 85
  Serratia liquefaciens MT49 IAI46_06010 rRNA maturation RNase YbeY no data 28 73
  Caulobacter crescentus NA1000 CCNA_00052 metal-dependent hydrolase/metalloproteinase no data 28 75
  Caulobacter crescentus NA1000 Δfur CCNA_00052 metal-dependent hydrolase/metalloproteinase no data 28 75
  Rhodospirillum rubrum S1H Rru_A3772 Protein of unknown function UPF0054 (NCBI) no data 26 56
  Dickeya dianthicola 67-19 HGI48_RS06285 rRNA maturation RNase YbeY no data 28 66
  Pseudomonas simiae WCS417 PS417_24635 rRNA maturation factor no data 30 76
  Shewanella amazonensis SB2B Sama_2577 putative metalloprotease (RefSeq) no data 30 48
  Erwinia tracheiphila SCR3 LU632_RS16315 ybeY rRNA maturation RNase YbeY no data 28 73
  Ralstonia solanacearum PSI07 RPSI07_RS21390 rRNA maturation RNase YbeY no data 26 76
  Dickeya dadantii 3937 DDA3937_RS06240 rRNA maturation RNase YbeY no data 28 66
  Shewanella loihica PV-4 Shew_2925 putative metalloprotease (RefSeq) no data 32 55
  Rahnella sp. WP5 EX31_RS23190 rRNA maturation RNase YbeY no data 28 66
  Dickeya dianthicola ME23 DZA65_RS06630 rRNA maturation RNase YbeY no data 27 66
  Vibrio cholerae E7946 ATCC 55056 CSW01_04905 endoribonuclease YbeY no data 31 55
  Bifidobacterium breve UCC2003 BBR_RS15165 rRNA maturation RNase YbeY no data 29 65
  Shewanella oneidensis MR-1 SO1179 conserved hypothetical protein TIGR00043 (NCBI ptt file) no data 25 73
  Pseudomonas fluorescens FW300-N2E3 AO353_06385 rRNA maturation factor no data 27 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14710 rRNA maturation RNase YbeY no data 24 56
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09925 rRNA maturation RNase YbeY no data 30 48
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2710 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly no data 28 75
  Acidovorax sp. GW101-3H11 Ac3H11_4681 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly no data 26 51
  Ralstonia solanacearum GMI1000 RS_RS02635 rRNA maturation RNase YbeY no data 26 76
  Herbaspirillum seropedicae SmR1 HSERO_RS03605 16S rRNA maturation RNase YbeY no data 24 68
  Shewanella sp. ANA-3 Shewana3_1006 putative metalloprotease (RefSeq) no data 25 73
  Variovorax sp. SCN45 GFF2071 Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly no data 25 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11815 rRNA maturation RNAse YbeY no data 25 76
  Ralstonia solanacearum UW163 UW163_RS01770 rRNA maturation RNAse YbeY no data 25 76
  Pseudomonas sp. RS175 PFR28_03850 Endoribonuclease YbeY no data 24 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS02185 rRNA maturation RNase YbeY no data 26 68