Homologs of BWI76_RS04570 from Klebsiella michiganensis M5al

RNA polymerase-associated protein RapA
SEED: RNA polymerase associated protein RapA (EC 3.6.1.-)
KEGG: ATP-dependent helicase HepA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Klebsiella michiganensis M5al BWI76_RS04570 RNA polymerase-associated protein RapA strong 100 100
o Enterobacter sp. TBS_079 MPMX20_00753 RNA polymerase-associated protein RapA strong 93 100
o Enterobacter asburiae PDN3 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family cofit 92 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) cofit 92 100
o Escherichia coli BL21 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase strong 90 100
o Escherichia coli ECOR27 NOLOHH_03145 rapA RNA polymerase-associated protein RapA strong 90 100
o Escherichia coli ECRC101 OKFHMN_10800 rapA RNA polymerase-associated protein RapA strong 90 100
o Escherichia coli ECRC101 MCAODC_01315 rapA RNA polymerase-associated protein RapA strong 90 100
o Escherichia coli ECRC102 NIAGMN_08650 rapA RNA polymerase-associated protein RapA sig. 90 100
o Escherichia coli ECRC62 BNILDI_08460 rapA RNA polymerase-associated protein RapA insig. 90 100
o Escherichia coli ECRC98 JDDGAC_14395 rapA RNA polymerase-associated protein RapA no data 90 100
o Escherichia coli ECRC99 KEDOAH_17355 rapA RNA polymerase-associated protein RapA no data 90 100
o Escherichia coli Nissle 1917 ECOLIN_RS00315 RNA polymerase-associated protein RapA strong 90 100
o Escherichia coli BW25113 b0059 hepA ATP-dependent helicase HepA (NCBI) strong 90 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03599 RNA polymerase-associated protein RapA strong 90 100
o Escherichia fergusonii Becca EFB2_03986 RNA polymerase-associated protein RapA insig. 90 100
o Escherichia coli ECOR38 HEPCGN_08790 rapA RNA polymerase-associated protein RapA cofit 90 100
o Pantoea sp. MT58 IAI47_16055 RNA polymerase-associated protein RapA cofit 83 100
o Serratia liquefaciens MT49 IAI46_03275 RNA polymerase-associated protein RapA insig. 81 100
o Erwinia tracheiphila SCR3 LU632_RS02805 rapA RNA polymerase-associated protein RapA insig. 81 100
o Rahnella sp. WP5 EX31_RS03745 RNA polymerase-associated protein RapA cofit 78 100
o Pectobacterium carotovorum WPP14 HER17_RS02990 RNA polymerase-associated protein RapA cofit 78 100
o Dickeya dadantii 3937 DDA3937_RS18235 RNA polymerase-associated protein RapA sig. 77 100
o Dickeya dianthicola 67-19 HGI48_RS18170 RNA polymerase-associated protein RapA cofit 77 100
o Dickeya dianthicola ME23 DZA65_RS19310 RNA polymerase-associated protein RapA cofit 76 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_12705 RNA polymerase-associated protein RapA insig. 62 100
o Shewanella amazonensis SB2B Sama_3131 ATP-dependent helicase HepA (RefSeq) sig. 60 100
o Shewanella sp. ANA-3 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) sig. 59 100
o Shewanella oneidensis MR-1 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) sig. 58 100
o Shewanella loihica PV-4 Shew_0457 ATP-dependent helicase HepA (RefSeq) sig. 58 100
o Pseudomonas sp. RS175 PFR28_00612 RNA polymerase-associated protein RapA insig. 53 99
o Pseudomonas syringae pv. syringae B728a Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit sig. 52 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit sig. 52 99
o Pseudomonas fluorescens FW300-N2C3 AO356_04975 RNA polymerase-associated protein RapA sig. 53 99
o Pseudomonas fluorescens SBW25 PFLU_RS06675 RNA polymerase-associated protein RapA cofit 52 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06675 RNA polymerase-associated protein RapA sig. 52 99
o Pseudomonas putida KT2440 PP_1145 RNA polymerase-associated protein RapA sig. 52 99
o Pseudomonas fluorescens FW300-N2E3 AO353_17155 RNA polymerase-associated protein RapA sig. 52 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) strong 52 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 52 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 52 99
o Pseudomonas stutzeri RCH2 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family sig. 52 99
o Pseudomonas sp. S08-1 OH686_19955 RNA polymerase associated protein RapA insig. 52 100
o Pseudomonas simiae WCS417 PS417_06645 RNA polymerase-associated protein RapA strong 52 99
o Alteromonas macleodii MIT1002 MIT1002_00659 RNA polymerase-associated protein RapA cofit 46 99
o Marinobacter adhaerens HP15 HP15_3376 RNA polymerase-associated protein RapA strong 44 100
o Acinetobacter radioresistens SK82 MPMX26_01027 RNA polymerase-associated protein RapA strong 43 100
o Rhodanobacter denitrificans MT42 LRK55_RS02635 RNA polymerase-associated protein RapA strong 42 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02885 RNA polymerase-associated protein RapA strong 42 99
o Rhodanobacter sp. FW510-T8 OKGIIK_09865 rapA RNA polymerase-associated protein RapA cofit 41 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09245 RNA polymerase-associated protein RapA sig. 41 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6015 RNA polymerase associated protein RapA (EC 3.6.1.-) insig. 28 48
  Escherichia coli ECRC62 BNILDI_09545 hepA helicase sig. 24 47
  Escherichia coli ECRC99 KEDOAH_16475 hepA helicase no data 24 47
  Escherichia coli ECRC101 OKFHMN_11670 hepA helicase sig. 24 47
  Escherichia coli ECRC101 MCAODC_02185 hepA helicase strong 24 47
  Escherichia coli ECRC102 NIAGMN_09520 hepA helicase sig. 24 47
  Escherichia coli ECRC98 JDDGAC_15270 hepA helicase no data 24 47
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 36 19
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 33 20
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 33 20
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 38 18
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 34 19
  Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 35 17
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 38 18
  Paraburkholderia graminis OAS925 ABIE53_003106 superfamily II DNA or RNA helicase insig. 34 17
  Paraburkholderia sabiae LMG 24235 QEN71_RS00695 DEAD/DEAH box helicase cofit 34 19
  Castellaniella sp019104865 MT123 ABCV34_RS02050 helicase-related protein cofit 30 17
  Bosea sp. OAE506 ABIE41_RS19075 DISARM system SNF2-like helicase DrmD insig. 33 17
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0444 Superfamily II DNA/RNA helicases, SNF2 family insig. 21 45
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 38 11
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 54 5
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 42 7
  Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 29 12
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 39 10
  Paraburkholderia graminis OAS925 ABIE53_003106 superfamily II DNA or RNA helicase insig. 32 12
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 44 7
  Cupriavidus basilensis FW507-4G11 RR42_RS03175 DNA helicase strong 24 45
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 41 7
  Cupriavidus basilensis FW507-4G11 RR42_RS08740 helicase insig. 21 45
  Shewanella amazonensis SB2B Sama_0383 ATP-dependent RNA helicase RhlE (RefSeq) insig. 33 11
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14095 hypothetical protein insig. 27 17
  Burkholderia phytofirmans PsJN BPHYT_RS24775 helicase insig. 33 16
  Vibrio cholerae E7946 ATCC 55056 CSW01_19065 ATP-dependent helicase insig. 28 15
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00855 RNA helicase sig. 32 14
  Bacteroides ovatus ATCC 8483 BACOVA_01961 SNF2 family N-terminal domain protein insig. 22 44
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 35 11
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 34 9
  Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 32 10
  Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 32 10
  Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 32 10
  Bacteroides thetaiotaomicron VPI-5482 BT4628 ATP-dependent helicase (NCBI ptt file) insig. 36 8
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06540 Superfamily II DNA or RNA helicase, SNF2 family insig. 32 16
  Pseudomonas putida KT2440 PP_1937 putative helicase insig. 47 5
  Shewanella sp. ANA-3 Shewana3_1422 4a-hydroxytetrahydrobiopterin dehydratase (RefSeq) no data 29 14
  Shewanella oneidensis MR-1 SO3125 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 29 14
  Castellaniella sp019104865 MT123 ABCV34_RS02050 helicase-related protein cofit 37 12
  Paraburkholderia graminis OAS925 ABIE53_006198 superfamily II DNA or RNA helicase insig. 31 16
  Erwinia tracheiphila SCR3 LU632_RS20970 DEAD/DEAH box helicase cofit 29 18
  Paraburkholderia graminis OAS925 ABIE53_000519 hypothetical protein insig. 32 10