Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Agrobacterium fabrum C58 | Atu4035 | | two component response regulator | sig. | 100 | 100 |
o | Sinorhizobium meliloti 1021 | SMa0206 | | Response regulator | insig. | 82 | 98 |
o | Rhizobium sp. OAE497 | ABIE40_RS29550 | | response regulator transcription factor | insig. | 52 | 98 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 29 | 70 |
| Alteromonas macleodii MIT1002 | MIT1002_03322 | | Transcriptional activator protein ExaE | strong | 27 | 80 |
| Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 32 | 81 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1296 | | DNA-binding response regulator, LuxR family | strong | 29 | 80 |
| Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 29 | 81 |
| Pseudomonas simiae WCS417 | PS417_17470 | | LuxR family transcriptional regulator | insig. | 29 | 80 |
| Lysobacter sp. OAE881 | ABIE51_RS10620 | | response regulator transcription factor | insig. | 33 | 91 |
| Pseudomonas stutzeri RCH2 | Psest_2048 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 29 | 80 |
| Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 29 | 81 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 30 | 81 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25670 | | regulator | sig. | 29 | 80 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_02965 | | LuxR family transcriptional regulator | insig. | 25 | 82 |
| Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 29 | 80 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_28065 | | LuxR family transcriptional regulator | strong | 28 | 80 |
| Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 30 | 81 |
| Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 27 | 81 |
| Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 27 | 78 |
| Mycobacterium tuberculosis H37Rv | Rv3133c | | Two component transcriptional regulatory protein DevR (probably LuxR/UhpA-family) | sig. | 31 | 80 |
| Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 29 | 61 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 24 | 82 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 29 | 78 |
| Alteromonas macleodii MIT1002 | MIT1002_03526 | | Nitrogen regulation protein C | insig. | 28 | 60 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 27 | 78 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS33915 | | two-component system response regulator NarL | insig. | 29 | 80 |
| Pseudomonas sp. RS175 | PFR28_01811 | | Transcriptional activator protein ExaE | insig. | 26 | 80 |
| Pseudomonas sp. RS175 | PFR28_01618 | | Oxygen regulatory protein NreC | strong | 29 | 79 |
| Pseudomonas putida KT2440 | PP_2672 | | Transcriptional activator protein ExaE | strong | 27 | 80 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 30 | 81 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1391 | | DNA-binding response regulator, LuxR family | strong | 27 | 80 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16950 | | response regulator transcription factor | insig. | 29 | 82 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 28 | 88 |
| Variovorax sp. OAS795 | ABID97_RS07360 | | response regulator transcription factor | strong | 31 | 67 |
| Variovorax sp. SCN45 | GFF2564 | | Two-component transcriptional response regulator, LuxR family | cofit | 31 | 67 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 28 | 79 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 28 | 79 |
| Acinetobacter radioresistens SK82 | MPMX26_02902 | | Transcriptional activator protein ExaE | strong | 25 | 80 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_25245 | | regulator | strong | 29 | 79 |
| Pseudomonas simiae WCS417 | PS417_10655 | | LuxR family transcriptional regulator | insig. | 30 | 79 |
| Bifidobacterium breve UCC2003 | BBR_RS14900 | | DNA-binding response regulator | sig. | 28 | 80 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 27 | 79 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | strong | 26 | 80 |
| Enterobacter sp. TBS_079 | MPMX20_02839 | | Response regulator UvrY | strong | 26 | 80 |
| Pseudomonas sp. RS175 | PFR28_01009 | | Transcriptional regulatory protein DegU | insig. | 24 | 82 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 27 | 80 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS05525 | | response regulator transcription factor | insig. | 26 | 79 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 28 | 70 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 27 | 80 |
| Rhizobium sp. OAE497 | ABIE40_RS23610 | | response regulator transcription factor | insig. | 30 | 78 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS23095 | | DNA-binding response regulator | insig. | 27 | 82 |
| Variovorax sp. SCN45 | GFF850 | | Two-component transcriptional response regulator, LuxR family | insig. | 27 | 78 |
| Lysobacter sp. OAE881 | ABIE51_RS10325 | | response regulator transcription factor | insig. | 30 | 79 |
| Dechlorosoma suillum PS | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 27 | 81 |
| Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 25 | 79 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 25 | 79 |
| Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 25 | 79 |
| Castellaniella sp019104865 MT123 | ABCV34_RS08970 | | response regulator transcription factor | insig. | 26 | 75 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS34135 | | two-component system response regulator NarL | insig. | 25 | 80 |
| Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 25 | 79 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_06500 | citB | DNA-binding response regulator | no data | 30 | 79 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS36960 | | response regulator transcription factor | insig. | 26 | 88 |
| Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 25 | 80 |
| Ralstonia solanacearum PSI07 | RPSI07_RS23850 | | DNA-binding response regulator | cofit | 29 | 79 |
| Variovorax sp. OAS795 | ABID97_RS12700 | | response regulator transcription factor | insig. | 29 | 80 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10065 | | DNA-binding response regulator | insig. | 28 | 79 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 26 | 70 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2030 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 25 | 79 |
| Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 24 | 68 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 27 | 68 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS05230 | | response regulator transcription factor | insig. | 29 | 79 |
| Lysobacter sp. OAE881 | ABIE51_RS14590 | | response regulator transcription factor | sig. | 27 | 89 |
| Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 24 | 68 |
| Burkholderia phytofirmans PsJN | BPHYT_RS31295 | | LuxR family transcriptional regulator | insig. | 28 | 88 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09500 | | DNA-binding response regulator | insig. | 29 | 79 |
| Ralstonia solanacearum UW163 | UW163_RS04080 | | DNA-binding response regulator | insig. | 29 | 79 |
| Shewanella amazonensis SB2B | Sama_1607 | | response regulator (RefSeq) | strong | 24 | 68 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_02305 | | LuxR family transcriptional regulator | insig. | 33 | 49 |
| Rhodopseudomonas palustris CGA009 | TX73_007655 | | response regulator transcription factor | cofit | 30 | 80 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | no data | 28 | 67 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03153 | | two component transcriptional regulator, LuxR family | insig. | 28 | 79 |
| Variovorax sp. SCN45 | GFF5597 | | Two-component transcriptional response regulator, LuxR family | insig. | 26 | 78 |
| Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | no data | 26 | 80 |
| Escherichia coli ECOR38 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | cofit | 26 | 80 |
| Escherichia coli ECRC101 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | insig. | 26 | 80 |
| Escherichia coli ECRC101 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | insig. | 26 | 80 |
| Escherichia coli ECRC102 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | no data | 26 | 80 |
| Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 26 | 80 |
| Escherichia coli ECRC98 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | no data | 26 | 80 |
| Escherichia coli ECRC99 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | no data | 26 | 80 |
| Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | sig. | 26 | 80 |
| Escherichia fergusonii Becca | EFB2_02032 | | Response regulator UvrY | cofit | 26 | 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01815 | | Response regulator UvrY | insig. | 26 | 80 |
| Escherichia coli Nissle 1917 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | no data | 26 | 80 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 25 | 79 |
| Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 26 | 81 |
| Bosea sp. OAE506 | ABIE41_RS15410 | | response regulator transcription factor | insig. | 29 | 80 |
| Variovorax sp. SCN45 | GFF4727 | | Two-component transcriptional response regulator, LuxR family | insig. | 27 | 79 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS06185 | | response regulator protein | sig. | 26 | 79 |