Homologs of Atu0839 from Agrobacterium fabrum C58

hypothetical protein
SEED: mRNA 3-end processing factor
KEGG: putative mRNA 3-end processing factor

69 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu0839 hypothetical protein sig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS04630 ligase-associated DNA damage response exonuclease insig. 79 100
o Sinorhizobium meliloti 1021 SMc03176 hypothetical protein insig. 73 100
o Phaeobacter inhibens DSM 17395 PGA1_262p00510 Predicted exonuclease of the beta-lactamase fold involved in RNA processing sig. 65 100
o Bosea sp. OAE506 ABIE41_RS24100 ligase-associated DNA damage response exonuclease insig. 63 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08710 ligase-associated DNA damage response exonuclease insig. 63 100
o Caulobacter crescentus NA1000 CCNA_03759 mRNA 3'-end processing factor sig. 64 99
o Caulobacter crescentus NA1000 Δfur CCNA_03759 mRNA 3'-end processing factor cofit 64 99
o Rhodopseudomonas palustris CGA009 TX73_004140 ligase-associated DNA damage response exonuclease insig. 63 99
o Xanthobacter sp. DMC5 GFF152 hypothetical protein insig. 59 100
o Azospirillum sp. SherDot2 MPMX19_02216 hypothetical protein insig. 60 98
o Azospirillum brasilense Sp245 AZOBR_RS09955 beta-lactamase insig. 60 99
o Alteromonas macleodii MIT1002 MIT1002_03767 Ribonuclease insig. 57 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3852 putative exonuclease, DNA ligase-associated insig. 57 97
o Variovorax sp. OAS795 ABID97_RS00395 ligase-associated DNA damage response exonuclease insig. 44 100
o Variovorax sp. SCN45 GFF3696 mRNA 3-end processing factor insig. 45 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS21350 ligase-associated DNA damage response exonuclease insig. 45 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3654.1 hypothetical protein insig. 45 95
o Burkholderia phytofirmans PsJN BPHYT_RS26305 exonuclease insig. 45 96
o Pseudomonas sp. BP01 JOY50_RS24065 ligase-associated DNA damage response exonuclease insig. 44 100
o Paraburkholderia graminis OAS925 ABIE53_005969 putative mRNA 3-end processing factor insig. 45 96
o Pseudomonas putida KT2440 PP_1106 conserved protein of unknown function insig. 44 100
o Lysobacter sp. OAE881 ABIE51_RS03750 ligase-associated DNA damage response exonuclease insig. 46 97
o Pseudomonas stutzeri RCH2 Psest_1649 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 43 100
o Pseudomonas sp. S08-1 OH686_06055 putative exonuclease, DNA ligase-associated insig. 44 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1242 mRNA 3-end processing factor insig. 45 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02820 putative mRNA 3-end processing factor insig. 45 96
o Pseudomonas syringae pv. syringae B728a Psyr_3872 conserved hypothetical protein insig. 42 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3872 conserved hypothetical protein insig. 42 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS20345 ligase-associated DNA damage response exonuclease insig. 44 96
o Pseudomonas sp. DMC3 GFF2149 hypothetical protein insig. 43 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3181 mRNA 3-end processing factor insig. 42 99
o Herbaspirillum seropedicae SmR1 HSERO_RS11400 exonuclease sig. 41 96
o Pseudomonas simiae WCS417 PS417_06425 exonuclease insig. 43 96
o Pseudomonas fluorescens SBW25 PFLU_RS06490 ligase-associated DNA damage response exonuclease insig. 43 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06490 ligase-associated DNA damage response exonuclease insig. 43 96
o Pseudomonas sp. RS175 PFR28_00509 hypothetical protein insig. 43 99
o Pseudomonas fluorescens FW300-N2C3 AO356_05485 DNA ligase-associated DEXH box helicase insig. 43 96
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09100 DNA ligase-associated DEXH box helicase insig. 39 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2956 mRNA 3-end processing factor insig. 42 98
o Dinoroseobacter shibae DFL-12 Dshi_2587 DNA damage response exonuclease, associated with a ligase (from data) strong 41 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20350 ligase-associated DNA damage response exonuclease insig. 37 99
o Cellulophaga baltica 18 M666_RS06770 ligase-associated DNA damage response exonuclease insig. 37 96
o Acidovorax sp. GW101-3H11 Ac3H11_4921 mRNA 3-end processing factor insig. 42 88
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS13225 exonuclease sig. 37 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14095 MBL fold metallo-hydrolase insig. 38 91
  Ralstonia sp. UNC404CL21Col ABZR87_RS19990 MBL fold metallo-hydrolase insig. 32 43
  Pseudomonas fluorescens FW300-N2C3 AO356_23925 mRNA 3'-end processing factor insig. 31 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1519 Metallo-beta-lactamase family protein, RNA-specific insig. 26 54
  Ralstonia solanacearum GMI1000 RS_RS00995 MBL fold metallo-hydrolase insig. 34 34
  Kangiella aquimarina DSM 16071 B158DRAFT_1678 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 34 36
  Pseudomonas sp. RS175 PFR28_02316 Ribonuclease insig. 26 54
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01950 MBL fold metallo-hydrolase insig. 42 20
  Methanococcus maripaludis JJ MMJJ_RS07240 MBL fold metallo-hydrolase strong 23 55
  Methanococcus maripaludis S2 MMP_RS07115 MBL fold metallo-hydrolase strong 23 55
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11070 MBL fold metallo-hydrolase insig. 30 31
  Pseudomonas fluorescens FW300-N2E3 AO353_19925 mRNA 3'-end processing factor insig. 26 54
  Pseudomonas stutzeri RCH2 Psest_2869 Predicted exonuclease of the beta-lactamase fold involved in RNA processing insig. 38 24
  Methanococcus maripaludis JJ MMJJ_RS02985 MBL fold metallo-hydrolase strong 23 69
  Marinobacter adhaerens HP15 HP15_2406 metallo-beta-lactamase family protein insig. 31 35
  Pseudomonas putida KT2440 PP_3291 Metallo-beta-lactamase family protein insig. 30 38
  Cupriavidus basilensis FW507-4G11 RR42_RS09610 mRNA 3'-end processing factor insig. 27 53
  Pseudomonas aeruginosa PA14 IKLFDK_18450 MBL fold metallo-hydrolase strong 38 21
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14480 MBL fold metallo-hydrolase insig. 29 37
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3226 Metallo-beta-lactamase family protein, RNA-specific insig. 30 34
  Rhodanobacter sp. FW510-T8 OKGIIK_00845 ySH1 MBL fold metallo-hydrolase cofit 27 54
  Castellaniella sp019104865 MT123 ABCV34_RS06000 MBL fold metallo-hydrolase insig. 32 34
  Rhodanobacter denitrificans MT42 LRK55_RS13845 MBL fold metallo-hydrolase cofit 31 37
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14125 MBL fold metallo-hydrolase insig. 31 37