Homologs of ABIE40_RS08215 from Rhizobium sp. OAE497

GGDEF domain-containing protein
SEED: Serine phosphatase RsbU, regulator of sigma subunit

Top 100 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Rhizobium sp. OAE497	ABIE40_RS08215		GGDEF domain-containing protein	insig.	100	100
o	Agrobacterium fabrum C58	Atu1207		GGDEF family protein	insig.	57	99
	Burkholderia phytofirmans PsJN	BPHYT_RS07820		hypothetical protein	strong	44	42
	Ralstonia sp. UNC404CL21Col	ABZR87_RS03580		sensor domain-containing diguanylate cyclase	insig.	43	41
	Acinetobacter radioresistens SK82	MPMX26_02129		hypothetical protein	insig.	40	41
	Marinobacter adhaerens HP15	HP15_3803		GGDEF domain-like protein	insig.	45	37
	Azospirillum brasilense Sp245	AZOBR_RS16180		diguanylate cyclase	strong	42	40
	Shewanella amazonensis SB2B	Sama_0530		response regulator receiver protein (RefSeq)	cofit	39	42
	Azospirillum sp. SherDot2	MPMX19_01522		Response regulator PleD	insig.	41	40
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02648		diguanylate cyclase (GGDEF) domain-containing protein	insig.	41	40
	Enterobacter asburiae PDN3	EX28DRAFT_0598		diguanylate cyclase (GGDEF) domain	insig.	43	37
	Acinetobacter radioresistens SK82	MPMX26_01917		hypothetical protein	no data	39	40
	Shewanella loihica PV-4	Shew_3023		diguanylate cyclase (RefSeq)	insig.	30	64
	Ralstonia solanacearum PSI07	RPSI07_RS09380		GGDEF domain-containing protein	insig.	39	41
	Enterobacter sp. TBS_079	MPMX20_02952		putative diguanylate cyclase DgcQ	insig.	42	36
	Acinetobacter radioresistens SK82	MPMX26_01486		hypothetical protein	no data	38	40
	Shewanella oneidensis MR-1	SO4207		GGDEF domain protein (NCBI ptt file)	strong	42	41
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3651.1		Sensor histidine kinase	insig.	41	45
	Magnetospirillum magneticum AMB-1	AMB_RS13840		sensor domain-containing diguanylate cyclase	cofit	38	40
	Desulfovibrio vulgaris Hildenborough JW710	DVU3106		GGDEF domain protein (TIGR)	sig.	40	40
	Dickeya dianthicola 67-19	HGI48_RS17605		GGDEF domain-containing protein	insig.	37	41
	Rhodospirillum rubrum S1H	Rru_A1272		Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI)	insig.	39	41
	Azospirillum brasilense Sp245	AZOBR_RS10245		diguanylate cyclase	sig.	41	41
	Shewanella sp. ANA-3	Shewana3_3733		diguanylate cyclase (RefSeq)	sig.	41	41
	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS08350		PleD family two-component system response regulator	insig.	38	41
	Dickeya dianthicola ME23	DZA65_RS18730		diguanylate cyclase	insig.	37	41
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02977		diguanylate cyclase (GGDEF) domain-containing protein	insig.	39	40
	Dickeya dadantii 3937	DDA3937_RS17585		GGDEF domain-containing protein	insig.	37	41
	Magnetospirillum magneticum AMB-1	AMB_RS09815		GGDEF domain-containing protein	insig.	45	36
	Rhodopseudomonas palustris CGA009	TX73_015465		GGDEF domain-containing protein	insig.	44	43
	Shewanella sp. ANA-3	Shewana3_3488		diguanylate cyclase (RefSeq)	cofit	37	38
	Azospirillum sp. SherDot2	MPMX19_01436		hypothetical protein	insig.	41	38
	Rhodospirillum rubrum S1H	Rru_A3374		Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI)	insig.	40	42
	Synechococcus elongatus PCC 7942	Synpcc7942_2535		diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors	insig.	37	44
	Marinobacter adhaerens HP15	HP15_2378		sensory box/GGDEF family protein	insig.	37	42
	Magnetospirillum magneticum AMB-1	AMB_RS16670		diguanylate cyclase	insig.	41	40
	Pseudomonas stutzeri RCH2	Psest_1170		diguanylate cyclase (GGDEF) domain	insig.	41	38
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS07895		GGDEF domain-containing protein	cofit	40	40
	Ralstonia solanacearum UW163	UW163_RS05730		GGDEF domain-containing protein	insig.	40	40
	Shewanella amazonensis SB2B	Sama_2623		cyclic nucleotide phosphodiesterase, putative (RefSeq)	strong	44	36
	Shewanella amazonensis SB2B	Sama_3210		GGDEF domain-containing protein (RefSeq)	strong	41	40
	Marinobacter adhaerens HP15	HP15_3912		diguanylate cyclase	insig.	40	40
	Pseudomonas putida KT2440	PP_1411		GGDEF domain protein	insig.	39	37
	Shewanella amazonensis SB2B	Sama_3537		GGDEF family protein (RefSeq)	insig.	37	38
	Paraburkholderia sabiae LMG 24235	QEN71_RS16450		diguanylate cyclase	insig.	36	45
	Pseudomonas fluorescens FW300-N2E3	AO353_25995		diguanylate cyclase	insig.	31	64
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_359		GGDEF domain protein	insig.	41	36
	Burkholderia phytofirmans PsJN	BPHYT_RS34775		diguanylate cyclase	insig.	39	44
	Pseudomonas fluorescens GW456-L13	PfGW456L13_4533		hypothetical protein	insig.	38	39
	Phaeobacter inhibens DSM 17395	PGA1_c26440		diguanylate cyclase (GGDEF) domain-containing protein	insig.	42	39
	Azospirillum brasilense Sp245	AZOBR_RS15555		transcriptional regulator	insig.	41	37
	Pseudomonas syringae pv. syringae B728a	Psyr_2535		GGDEF domain protein	insig.	41	37
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_2535		GGDEF domain protein	insig.	41	37
	Ralstonia solanacearum PSI07	RPSI07_RS09290		GGDEF domain-containing protein	insig.	35	43
	Rhodanobacter denitrificans MT42	LRK55_RS10100		GGDEF domain-containing protein	insig.	34	52
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS10460		GGDEF domain-containing protein	insig.	34	52
	Desulfovibrio vulgaris Miyazaki F	DvMF_2637		diguanylate cyclase with extracellular sensor (RefSeq)	insig.	41	39
	Desulfovibrio vulgaris Hildenborough JW710	DVU1805		GGDEF domain protein (TIGR)	insig.	37	43
	Marinobacter adhaerens HP15	HP15_4093		membrane protein containing diguanylate cyclase, predicted domains	insig.	39	40
	Enterobacter asburiae PDN3	EX28DRAFT_1638		diguanylate cyclase (GGDEF) domain	insig.	37	39
	Rhodanobacter sp. FW510-T8	OKGIIK_13465	gGDEF	GGDEF domain-containing protein	insig.	34	52
	Dinoroseobacter shibae DFL-12	Dshi_2820		response regulator receiver modulated diguanylate cyclase (RefSeq)	sig.	42	40
	Rhodanobacter sp. FW510-T8	OKGIIK_09270		Diguanylate cyclase	insig.	42	36
	Shewanella amazonensis SB2B	Sama_2887		GGDEF domain-containing protein (RefSeq)	insig.	41	37
	Cupriavidus basilensis FW507-4G11	RR42_RS25885		diguanylate cyclase	insig.	40	36
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_03607		PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein	insig.	39	44
	Paraburkholderia graminis OAS925	ABIE53_004649		diguanylate cyclase (GGDEF)-like protein	strong	38	44
	Rhizobium sp. OAE497	ABIE40_RS07330		PleD family two-component system response regulator	cofit	37	43
	Pseudomonas putida KT2440	PP_3932		Diguanylate cyclase	insig.	43	36
	Pseudomonas fluorescens FW300-N2C3	AO356_17195		deoxyribonuclease	sig.	42	37
	Sinorhizobium meliloti 1021	SMc01370		response regulator PleD	insig.	42	37
	Caulobacter crescentus NA1000	CCNA_02546		GGDEF/response regulator protein PleD	strong	40	38
	Caulobacter crescentus NA1000 Δfur	CCNA_02546		GGDEF/response regulator protein PleD	cofit	40	38
	Pseudomonas putida KT2440	PP_3348		GGDEF domain protein	sig.	39	37
	Marinobacter adhaerens HP15	HP15_3345		GGDEF domain protein	insig.	40	37
	Azospirillum sp. SherDot2	MPMX19_02596		hypothetical protein	insig.	38	38
	Pseudomonas fluorescens FW300-N2E3	AO353_15375		deoxyribonuclease	strong	39	39
	Pseudomonas syringae pv. syringae B728a	Psyr_1125		GGDEF domain protein	insig.	38	42
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_1125		GGDEF domain protein	insig.	38	42
	Enterobacter asburiae PDN3	EX28DRAFT_1001		PAS domain S-box/diguanylate cyclase (GGDEF) domain	insig.	37	42
	Dickeya dianthicola 67-19	HGI48_RS11510		EAL domain-containing protein	cofit	36	41
	Dickeya dianthicola ME23	DZA65_RS11845		EAL domain-containing protein	cofit	36	41
	Marinobacter adhaerens HP15	HP15_p187g173		protein containing diguanylate cyclase, predicted domains	insig.	42	37
	Rhodospirillum rubrum S1H	Rru_A2593		Putative diguanylate cyclase (GGDEF domain) (NCBI)	insig.	41	40
	Magnetospirillum magneticum AMB-1	AMB_RS23665		GGDEF domain-containing protein	insig.	40	41
	Azospirillum sp. SherDot2	MPMX19_01264		hypothetical protein	insig.	39	41
	Acidovorax sp. GW101-3H11	Ac3H11_3356		diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	insig.	38	39
	Enterobacter sp. TBS_079	MPMX20_01996		putative diguanylate cyclase DgcT	insig.	37	39
	Shewanella loihica PV-4	Shew_2977		diguanylate cyclase (RefSeq)	strong	45	30
	Pseudomonas fluorescens FW300-N2E3	AO353_02110		hypothetical protein	insig.	41	36
	Pseudomonas sp. S08-1	OH686_20110		Diguanylate cyclase	cofit	40	37
	Marinobacter adhaerens HP15	HP15_4072		diguanylate cyclase with PAS/PAC sensor	insig.	39	43
	Marinobacter adhaerens HP15	HP15_3976		protein containing diguanylate cyclase, predicted domains	sig.	37	41
	Shewanella loihica PV-4	Shew_3330		diguanylate cyclase (RefSeq)	insig.	36	38
	Pectobacterium carotovorum WPP14	HER17_RS03820		diguanylate cyclase	cofit	31	54
	Shewanella loihica PV-4	Shew_2040		diguanylate cyclase (RefSeq)	no data	41	37
	Magnetospirillum magneticum AMB-1	AMB_RS23435		GGDEF domain-containing protein	insig.	40	38
	Shewanella loihica PV-4	Shew_0452		diguanylate cyclase (RefSeq)	insig.	40	37
	Dechlorosoma suillum PS	Dsui_3164		diguanylate cyclase (GGDEF) domain-containing protein	cofit	38	37
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_5364		GGDEF domain protein	insig.	42	37