Homologs of ABID97_RS00325 from Variovorax sp. OAS795

efflux RND transporter permease subunit
SEED: RND efflux system, inner membrane transporter CmeB

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. OAS795 ABID97_RS00325 efflux RND transporter permease subunit strong 100 100
o Variovorax sp. SCN45 GFF3725 RND efflux system, inner membrane transporter insig. 95 100
o Acidovorax sp. GW101-3H11 Ac3H11_4448 RND efflux system, inner membrane transporter CmeB strong 85 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3840 RND efflux system, inner membrane transporter CmeB insig. 82 99
o Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 67 99
o Ralstonia solanacearum PSI07 RPSI07_RS23905 hydrophobe/amphiphile efflux-1 family RND transporter strong 68 99
o Ralstonia solanacearum GMI1000 RS_RS00045 multidrug efflux RND transporter permease subunit strong 68 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit strong 68 99
o Ralstonia solanacearum UW163 UW163_RS04135 multidrug efflux RND transporter permease subunit insig. 68 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS05315 efflux RND transporter permease subunit strong 67 99
o Cupriavidus basilensis FW507-4G11 RR42_RS20650 multidrug efflux RND transporter permease subunit strong 62 99
o Sinorhizobium meliloti 1021 SMc02867 multidrug-efflux system transmembrane protein strong 61 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4772 RND efflux system, inner membrane transporter CmeB strong 61 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2954 RND efflux system, inner membrane transporter CmeB strong 61 96
o Pseudomonas fluorescens FW300-N2E3 AO353_26845 acriflavine resistance protein B strong 61 96
o Pseudomonas fluorescens FW300-N2C3 AO356_28730 acriflavine resistance protein B strong 60 96
o Agrobacterium fabrum C58 Atu3202 RND multidrug efflux transporter strong 61 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1661 RND efflux system, inner membrane transporter CmeB strong 60 96
o Pseudomonas fluorescens SBW25 PFLU_RS13280 multidrug efflux RND transporter permease subunit insig. 61 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13280 multidrug efflux RND transporter permease subunit sig. 61 96
o Pseudomonas sp. DMC3 GFF2918 Multidrug efflux pump subunit AcrB cofit 60 96
o Pseudomonas sp. RS175 PFR28_02463 Multidrug resistance protein MexB insig. 60 96
o Pseudomonas sp. SVBP6 COO64_RS25445 efflux RND transporter permease subunit insig. 59 98
o Pseudomonas simiae WCS417 PS417_12585 acriflavine resistance protein B strong 61 96
o Castellaniella sp019104865 MT123 ABCV34_RS04225 efflux RND transporter permease subunit strong 58 98
o Pseudomonas sp. BP01 JOY50_RS19675 efflux RND transporter permease subunit insig. 59 96
o Rhodopseudomonas palustris CGA009 TX73_007700 multidrug efflux RND transporter permease subunit insig. 58 98
o Pseudomonas aeruginosa PA14 IKLFDK_23290 multidrug efflux RND transporter permease subunit MexB cofit 55 99
  Rhodopseudomonas palustris CGA009 TX73_020235 efflux RND transporter permease subunit cofit 57 99
o Methylophilus sp. DMC18 GFF2593 Multidrug efflux pump subunit AcrB insig. 56 98
o Escherichia fergusonii Becca EFB2_00558 Multidrug export protein AcrF insig. 56 98
o Escherichia coli ECOR27 NOLOHH_09440 acrF multidrug efflux RND transporter permease subunit AcrF insig. 56 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00439 Multidrug export protein AcrF insig. 56 98
o Escherichia coli Nissle 1917 ECOLIN_RS18755 multidrug efflux RND transporter permease subunit AcrF insig. 56 98
o Pseudomonas putida KT2440 PP_3456 Multidrug resistance protein MexB strong 58 99
o Escherichia coli BL21 ECD_03124 multidrug efflux system protein insig. 56 98
o Escherichia coli ECRC62 BNILDI_02080 acrF multidrug efflux RND transporter permease subunit AcrF cofit 56 98
o Caulobacter crescentus NA1000 CCNA_00850 cation/multidrug efflux pump acrB2 strong 57 98
o Caulobacter crescentus NA1000 Δfur CCNA_00850 cation/multidrug efflux pump acrB2 cofit 57 98
o Escherichia coli BW25113 b3266 acrF multidrug efflux system protein (NCBI) insig. 56 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04170 multidrug efflux pump strong 55 99
o Rahnella sp. WP5 EX31_RS22470 multidrug efflux RND transporter permease subunit cofit 55 96
o Rhodospirillum rubrum S1H Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) insig. 56 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2116 RND efflux system, inner membrane transporter CmeB insig. 55 96
o Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 55 100
  Pseudomonas sp. RS175 PFR28_00631 putative efflux pump membrane transporter TtgB strong 55 99
  Pseudomonas sp. SVBP6 COO64_RS26275 efflux RND transporter permease subunit cofit 55 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS02525 efflux RND transporter permease subunit strong 54 99
o Burkholderia phytofirmans PsJN BPHYT_RS16170 multidrug efflux RND transporter permease subunit no data 54 99
o Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 54 98
o Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 53 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB strong 54 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU2816 multidrug resistance protein (TIGR) sig. 54 97
o Pseudomonas syringae pv. syringae B728a Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 strong 55 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 no data 55 99
o Klebsiella michiganensis M5al BWI76_RS06775 multidrug efflux RND transporter permease subunit strong 55 96
  Pseudomonas fluorescens FW300-N2E3 AO353_17295 multidrug transporter strong 54 99
o Pectobacterium carotovorum WPP14 HER17_RS15740 multidrug efflux RND transporter permease subunit cofit 55 96
  Pseudomonas fluorescens FW300-N2C3 AO356_04880 multidrug transporter strong 54 99
  Pseudomonas sp. DMC3 GFF2212 Toluene efflux pump membrane transporter TtgB cofit 54 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4379 RND efflux system, inner membrane transporter CmeB sig. 55 96
o Azospirillum sp. SherDot2 MPMX19_05884 Multidrug efflux pump subunit AcrB insig. 54 98
o Paraburkholderia graminis OAS925 ABIE53_003408 multidrug efflux pump strong 54 99
  Pseudomonas simiae WCS417 PS417_06770 multidrug transporter strong 54 99
o Shewanella sp. ANA-3 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 55 98
o Dickeya dadantii 3937 DDA3937_RS05735 multidrug efflux RND transporter permease subunit strong 55 99
  Cupriavidus basilensis FW507-4G11 RR42_RS32420 multidrug efflux RND transporter permease subunit insig. 54 98
o Shewanella oneidensis MR-1 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) strong 55 99
o Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 55 96
o Dechlorosoma suillum PS Dsui_3182 hydrophobe/amphiphile efflux-1 (HAE1) family transporter no data 56 97
  Pseudomonas putida KT2440 PP_1385 Probable efflux pump membrane transporter TtgB strong 54 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB strong 54 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB strong 54 99
  Pseudomonas syringae pv. syringae B728a Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 strong 57 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 strong 57 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS09795 efflux RND transporter permease subunit insig. 56 99
  Enterobacter asburiae PDN3 EX28DRAFT_3319 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 54 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit insig. 55 98
  Ralstonia solanacearum UW163 UW163_RS19380 multidrug efflux RND transporter permease subunit insig. 55 98
  Ralstonia solanacearum GMI1000 RS_RS21030 multidrug efflux RND transporter permease subunit insig. 55 98
  Ralstonia solanacearum PSI07 RPSI07_RS03390 multidrug efflux RND transporter permease subunit insig. 55 99
o Erwinia tracheiphila SCR3 LU632_RS18185 efflux RND transporter permease subunit no data 54 96
o Enterobacter sp. TBS_079 MPMX20_01064 Multidrug efflux pump subunit AcrB strong 54 96
  Pseudomonas sp. BP01 JOY50_RS14445 ttgB multidrug efflux RND transporter permease subunit TtgB cofit 54 98
o Serratia liquefaciens MT49 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY cofit 55 96
  Rhodopseudomonas palustris CGA009 TX73_014175 multidrug efflux RND transporter permease subunit insig. 57 96
  Klebsiella michiganensis M5al BWI76_RS25585 multidrug efflux RND transporter permease subunit insig. 54 96
  Enterobacter sp. TBS_079 MPMX20_04175 Multidrug export protein AcrF insig. 54 96
  Escherichia coli BL21 ECD_00413 multidrug efflux system protein strong 55 96
  Escherichia fergusonii Becca EFB2_03596 Multidrug efflux pump subunit AcrB insig. 55 96
  Escherichia coli ECOR27 NOLOHH_01140 acrB efflux RND transporter permease AcrB cofit 55 96
o Escherichia coli ECOR38 HEPCGN_06820 acrB efflux RND transporter permease AcrB strong 55 96
  Escherichia coli ECRC62 BNILDI_22555 acrB efflux RND transporter permease AcrB cofit 55 96
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03212 Multidrug efflux pump subunit AcrB cofit 55 96
  Escherichia coli Nissle 1917 ECOLIN_RS02750 efflux RND transporter permease AcrB sig. 55 96
  Escherichia coli BW25113 b0462 acrB multidrug efflux system protein (NCBI) strong 55 96
o Erwinia amylovora T8 OLJFJH_17855 multidrug efflux RND transporter permease subunit AcrB strong 55 96
o Escherichia coli ECRC100 OKFHMN_08205 acrB efflux RND transporter permease AcrB cofit 54 96
o Escherichia coli ECRC101 MCAODC_27430 acrB efflux RND transporter permease AcrB cofit 54 96
o Escherichia coli ECRC102 NIAGMN_06260 acrB efflux RND transporter permease AcrB insig. 54 96