Homologs of Sama_3210 from Shewanella amazonensis SB2B

GGDEF domain-containing protein (RefSeq)
SEED: GGDEF domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 100 100
o Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 56 99
o Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 57 93
o Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 56 93
o Alteromonas macleodii MIT1002 MIT1002_00511 Bacteriophytochrome cph2 insig. 37 88
o Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 34 91
  Pseudomonas sp. S08-1 OH686_21285 hypothetical protein cofit 33 87
  Pseudomonas sp. S08-1 OH686_13445 hypothetical protein insig. 32 92
  Marinobacter adhaerens HP15 HP15_2105 response regulator receiver domain protein (CheY-) insig. 30 87
o Pseudomonas stutzeri RCH2 Psest_0202 diguanylate cyclase (GGDEF) domain insig. 33 89
  Lysobacter sp. OAE881 ABIE51_RS13340 diguanylate cyclase insig. 30 95
  Dechlorosoma suillum PS Dsui_0513 diguanylate cyclase (GGDEF) domain-containing protein cofit 32 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1660 GGDEF domain protein insig. 49 28
  Pseudomonas fluorescens FW300-N2E3 AO353_15375 deoxyribonuclease strong 48 27
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02648 diguanylate cyclase (GGDEF) domain-containing protein insig. 43 32
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_936 GGDEF domain protein cofit 46 28
  Pseudomonas sp. S08-1 OH686_15950 hypothetical protein insig. 29 74
  Azospirillum sp. SherDot2 MPMX19_02025 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 50 27
  Shewanella oneidensis MR-1 SO4407 GGDEF family protein (NCBI ptt file) insig. 45 31
  Dechlorosoma suillum PS Dsui_0789 diguanylate cyclase (GGDEF) domain-containing protein insig. 44 32
  Herbaspirillum seropedicae SmR1 HSERO_RS23570 diguanylate cyclase insig. 38 43
  Pseudomonas fluorescens SBW25 PFLU_RS04750 GGDEF domain-containing protein insig. 47 26
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04750 GGDEF domain-containing protein insig. 47 26
  Ralstonia sp. UNC404CL21Col ABZR87_RS03580 sensor domain-containing diguanylate cyclase insig. 44 30
  Pseudomonas simiae WCS417 PS417_04675 deoxyribonuclease sig. 46 26
  Pseudomonas syringae pv. syringae B728a Psyr_1125 GGDEF domain protein insig. 43 28
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1125 GGDEF domain protein insig. 43 28
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5815 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 30
  Pseudomonas stutzeri RCH2 Psest_0700 diguanylate cyclase (GGDEF) domain insig. 29 89
  Kangiella aquimarina DSM 16071 B158DRAFT_0954 diguanylate cyclase (GGDEF) domain insig. 40 32
  Rahnella sp. WP5 EX31_RS24850 diguanylate cyclase insig. 43 30
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01602 diguanylate cyclase (GGDEF) domain-containing protein insig. 42 29
  Acidovorax sp. GW101-3H11 Ac3H11_3597 hypothetical protein insig. 42 30
  Cupriavidus basilensis FW507-4G11 RR42_RS09990 DeoR family transcriptional regulator insig. 42 29
  Ralstonia solanacearum UW163 UW163_RS17650 GGDEF domain-containing protein insig. 47 27
  Marinobacter adhaerens HP15 HP15_4072 diguanylate cyclase with PAS/PAC sensor insig. 43 31
  Pseudomonas sp. RS175 PFR28_03580 hypothetical protein insig. 44 27
  Herbaspirillum seropedicae SmR1 HSERO_RS15135 diguanylate cyclase sig. 44 29
  Vibrio cholerae E7946 ATCC 55056 CSW01_12010 GGDEF domain-containing protein insig. 42 30
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5364 GGDEF domain protein insig. 47 26
  Ralstonia solanacearum GMI1000 RS_RS19075 sensor domain-containing diguanylate cyclase insig. 45 27
  Pseudomonas sp. S08-1 OH686_18335 hypothetical protein insig. 40 31
  Dechlorosoma suillum PS Dsui_2486 diguanylate cyclase (GGDEF) domain-containing protein cofit 43 32
  Pseudomonas stutzeri RCH2 Psest_2106 diguanylate cyclase (GGDEF) domain sig. 43 29
  Rhodopseudomonas palustris CGA009 TX73_004565 diguanylate cyclase insig. 47 27
  Pseudomonas fluorescens FW300-N2C3 AO356_25285 diguanylate cyclase insig. 43 28
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3834 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 30
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_359 GGDEF domain protein insig. 48 27
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 47 28
  Paraburkholderia sabiae LMG 24235 QEN71_RS10075 diguanylate cyclase insig. 46 28
  Ralstonia sp. UNC404CL21Col ABZR87_RS23355 diguanylate cyclase strong 46 28
  Cupriavidus basilensis FW507-4G11 RR42_RS34850 diguanylate cyclase insig. 44 28
  Shewanella amazonensis SB2B Sama_2970 diguanylate cyclase (RefSeq) insig. 27 89
  Desulfovibrio vulgaris Hildenborough JW710 DVU3106 GGDEF domain protein (TIGR) sig. 46 26
  Pseudomonas fluorescens FW300-N2C3 AO356_17195 deoxyribonuclease sig. 46 26
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0300 diguanylate cyclase (GGDEF) domain insig. 45 29
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_40 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 28
  Paraburkholderia sabiae LMG 24235 QEN71_RS31465 diguanylate cyclase insig. 45 25
  Pseudomonas sp. RS175 PFR28_01649 hypothetical protein insig. 44 27
  Pseudomonas sp. S08-1 OH686_21185 PAS/PAC domain insig. 43 27
  Burkholderia phytofirmans PsJN BPHYT_RS01980 diguanylate cyclase insig. 41 30
  Pseudomonas sp. RS175 PFR28_00357 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 38 35
  Ralstonia solanacearum PSI07 RPSI07_RS01600 GGDEF domain-containing protein insig. 46 27
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3970 Two-component response regulator insig. 44 29
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1617 COG2199: FOG: GGDEF domain insig. 38 38
  Marinobacter adhaerens HP15 HP15_2378 sensory box/GGDEF family protein insig. 44 28
  Synechococcus elongatus PCC 7942 Synpcc7942_2534 diguanylate cyclase with GAF sensor insig. 44 28
  Ralstonia solanacearum PSI07 RPSI07_RS01585 GGDEF domain-containing protein insig. 44 27
  Pseudomonas putida KT2440 PP_1494 Response regulator/GGDEF domain protein strong 43 29
  Rhodanobacter denitrificans MT42 LRK55_RS00270 sensor domain-containing diguanylate cyclase cofit 42 28
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00530 sensor domain-containing diguanylate cyclase insig. 42 28
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16595 sensor domain-containing diguanylate cyclase insig. 41 29
  Ralstonia solanacearum UW163 UW163_RS17950 sensor domain-containing diguanylate cyclase insig. 41 29
  Pseudomonas fluorescens FW300-N2C3 AO356_01855 diguanylate cyclase insig. 43 29
  Paraburkholderia graminis OAS925 ABIE53_004284 diguanylate cyclase (GGDEF)-like protein insig. 44 29
  Ralstonia solanacearum PSI07 RPSI07_RS07115 GGDEF domain-containing protein insig. 44 29
  Pseudomonas sp. S08-1 OH686_11240 hypothetical protein insig. 44 28
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1357 PUTATIVE TRANSMEMBRANE PROTEIN insig. 43 28
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07895 GGDEF domain-containing protein cofit 41 29
  Ralstonia solanacearum UW163 UW163_RS05730 GGDEF domain-containing protein insig. 41 29
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1740.1 response regulator insig. 40 29
  Azospirillum brasilense Sp245 AZOBR_RS03050 diguanylate cyclase sig. 47 25
  Ralstonia solanacearum GMI1000 RS_RS19085 GGDEF domain-containing protein insig. 45 27
  Paraburkholderia sabiae LMG 24235 QEN71_RS32265 diguanylate cyclase insig. 45 26
  Burkholderia phytofirmans PsJN BPHYT_RS19780 diguanylate cyclase insig. 44 27
  Synechococcus elongatus PCC 7942 Synpcc7942_2096 diguanylate cyclase with GAF sensor insig. 43 28
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 42 32
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3039 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 42 29
  Ralstonia sp. UNC404CL21Col ABZR87_RS17590 sensor domain-containing diguanylate cyclase insig. 41 29
  Pseudomonas fluorescens FW300-N2C3 AO356_06245 diguanylate cyclase insig. 38 35
  Pseudomonas putida KT2440 PP_3932 Diguanylate cyclase insig. 46 27
  Acidovorax sp. GW101-3H11 Ac3H11_3356 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 27
  Rhodopseudomonas palustris CGA009 TX73_019845 diguanylate cyclase insig. 43 28
  Pseudomonas syringae pv. syringae B728a Psyr_2281 GGDEF domain protein insig. 43 29
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2281 GGDEF domain protein insig. 43 29
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3117 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 38 35
  Bosea sp. OAE506 ABIE41_RS18170 PleD family two-component system response regulator insig. 47 28
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02129 diguanylate cyclase (GGDEF) domain-containing protein insig. 44 27
  Dechlorosoma suillum PS Dsui_1430 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 28
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2239 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 29