Homologs of Shew_0950 from Shewanella loihica PV-4

DEAD/DEAH box helicase domain-containing protein (RefSeq)
SEED: ATP-dependent RNA helicase VVA0939

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0950 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 100 100
o Shewanella oneidensis MR-1 SO1383 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) strong 83 100
o Shewanella sp. ANA-3 Shewana3_2988 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 82 100
o Shewanella amazonensis SB2B Sama_0808 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 71 100
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 56 87
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 56 87
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE insig. 56 87
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE insig. 56 87
  Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 56 87
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE insig. 56 87
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE cofit 56 87
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 56 87
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE sig. 56 87
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 56 87
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02916 ATP-dependent RNA helicase RhlE insig. 56 87
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 56 87
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 56 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 55 87
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 55 87
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 55 87
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 55 87
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 55 87
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 55 87
  Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 55 87
  Klebsiella pneumoniae MRSN742743 KFA93_RS01465 rhlE;go_function=RNA ATP-dependent RNA helicase RhlE cofit 55 87
  Shewanella oneidensis MR-1 SO1501 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 52 93
  Serratia liquefaciens MT49 IAI46_06620 ATP-dependent RNA helicase RhlE cofit 54 87
  Shewanella sp. ANA-3 Shewana3_2928 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 54 88
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 54 87
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 54 87
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 54 87
  Erwinia amylovora T8 OLJFJH_16685 ATP-dependent RNA helicase RhlE cofit 54 87
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_19640 rhlE ATP-dependent RNA helicase RhlE cofit 53 87
  Erwinia tracheiphila SCR3 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE cofit 53 87
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 53 87
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 52 87
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 54 87
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 53 87
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 52 87
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 52 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 53 87
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 52 87
  Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 53 87
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 53 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 52 87
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 52 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 52 87
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 51 87
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 52 87
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 52 86
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 53 87
  Shewanella loihica PV-4 Shew_0604 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 52 87
  Vibrio cholerae E7946 ATCC 55056 CSW01_15010 ATP-dependent RNA helicase RhlE insig. 52 87
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 48 93
  Acidovorax sp. GW101-3H11 Ac3H11_386 ATP-dependent RNA helicase RhlE insig. 49 87
  Rhodanobacter denitrificans MT42 LRK55_RS02395 DEAD/DEAH box helicase insig. 52 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02640 DEAD/DEAH box helicase sig. 52 87
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 50 87
  Shewanella sp. ANA-3 Shewana3_1162 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 50 87
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 50 87
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07310 DEAD/DEAH box helicase insig. 51 87
  Shewanella oneidensis MR-1 SO3388 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 49 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08975 DEAD/DEAH box helicase insig. 50 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 51 84
  Shewanella loihica PV-4 Shew_2777 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 49 88
  Variovorax sp. SCN45 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 49 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE strong 49 87
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 51 84
  Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 49 88
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 50 86
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 50 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 50 86
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 50 86
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3530 ATP-dependent RNA helicase RhlE cofit 50 85
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 50 87
  Pseudomonas sp. S08-1 OH686_16620 ATP-dependent RNA helicase insig. 50 88
  Dechlorosoma suillum PS Dsui_0309 DNA/RNA helicase, superfamily II insig. 49 88
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 48 87
  Pseudomonas segetis P6 ACVTMO_RS03195 DEAD/DEAH box helicase strong 45 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 48 84
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 45 99
  Pseudomonas putida KT2440 PP_4980 ATP-dependent RNA helicase sig. 48 87
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 50 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 49 85
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 48 87
  Pseudomonas sp. DMC3 GFF174 ATP-dependent RNA helicase RhlE cofit 48 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE strong 47 88
  Pseudomonas orientalis W4I3 QF045_RS26765 DEAD/DEAH box helicase insig. 49 87
  Pseudomonas fluorescens FW300-N2C3 AO356_13590 DEAD/DEAH box helicase sig. 47 88
  Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 47 88
  Pseudomonas aeruginosa MRSN321 DY961_RS22125 DEAD/DEAH box helicase strong 46 93
  Pseudomonas aeruginosa PA14 IKLFDK_23280 DEAD/DEAH box helicase strong 46 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS37180 DEAD/DEAH box helicase strong 46 93
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 46 93
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 49 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 49 88
  Alteromonas macleodii MIT1002 MIT1002_03342 ATP-dependent RNA helicase RhlE insig. 48 87
  Pseudomonas orientalis W4I3 QF045_RS00920 DEAD/DEAH box helicase cofit 47 88
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 48 87
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 47 88