| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2644 | | transcriptional regulator, GntR family (TIGR) | strong | 100 | 100 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_960 | | Transcriptional regulator, GntR family | insig. | 30 | 91 |
| o | Dechlorosoma suillum PS | Dsui_0520 | | transcriptional regulator | strong | 28 | 95 |
| | Shewanella sp. ANA-3 | Shewana3_3824 | | GntR family transcriptional regulator (RefSeq) | strong | 32 | 91 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS23770 | | GntR family transcriptional regulator | insig. | 31 | 94 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004689 | | DNA-binding GntR family transcriptional regulator | sig. | 29 | 91 |
| o | Marinobacter adhaerens HP15 | HP15_1933 | | transcriptional regulator, GntR family | insig. | 29 | 83 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS34445 | | GntR family transcriptional regulator | insig. | 29 | 93 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_06730 | | GntR family transcriptional regulator | cofit | 31 | 88 |
| o | Shewanella oneidensis MR-1 | SO0346 | | transcriptional regulator. GntR family (NCBI ptt file) | cofit | 32 | 91 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2279 | | Transcriptional regulator, GntR family | sig. | 28 | 91 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2986 | | Transcriptional regulator, GntR family | cofit | 31 | 87 |
| | Shewanella amazonensis SB2B | Sama_3293 | | GntR family transcriptional regulator (RefSeq) | insig. | 30 | 91 |
| o | Rhizobium sp. OAE497 | ABIE40_RS23240 | | FCD domain-containing protein | insig. | 31 | 93 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS07965 | | GntR family transcriptional regulator | insig. | 28 | 93 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03503 | | transcriptional regulator, GntR family | insig. | 32 | 85 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03567 | | transcriptional regulator, GntR family | sig. | 29 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11040 | | GntR family transcriptional regulator | sig. | 35 | 72 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30810 | | transcriptional regulator | insig. | 30 | 88 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS21285 | | phosphonate utilization associated transcriptional regulator | insig. | 32 | 94 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS17000 | | GntR family transcriptional regulator | sig. | 28 | 93 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS18145 | | GntR family transcriptional regulator | cofit | 28 | 88 |
| | Dechlorosoma suillum PS | Dsui_0416 | | transcriptional regulator | no data | 25 | 92 |
| o | Variovorax sp. SCN45 | GFF6655 | | Transcriptional regulator, GntR family | insig. | 29 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_003870 | | phosphonate utilization transcriptional regulator | insig. | 34 | 74 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20820 | | phosphonate utilization associated transcriptional regulator | insig. | 27 | 95 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4127 | | Transcriptional regulator, GntR family | insig. | 29 | 87 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30405 | | GntR family transcriptional regulator | sig. | 27 | 92 |
| o | Variovorax sp. OAS795 | ABID97_RS15845 | | GntR family transcriptional regulator | insig. | 26 | 91 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF172 | | Transcriptional regulator, GntR family | insig. | 29 | 89 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04362 | | HTH-type transcriptional repressor GlaR | insig. | 29 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31395 | | GntR family transcriptional regulator | insig. | 30 | 90 |
| o | Pseudomonas sp. BP01 | JOY50_RS25755 | | GntR family transcriptional regulator | insig. | 29 | 95 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS22695 | | GntR family transcriptional regulator | insig. | 29 | 95 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS22695 | | GntR family transcriptional regulator | strong | 29 | 95 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4789 | | Transcriptional regulator, GntR family | sig. | 26 | 91 |
| o | Shewanella loihica PV-4 | Shew_0280 | | GntR family transcriptional regulator (RefSeq) | insig. | 30 | 91 |
| o | Pseudomonas simiae WCS417 | PS417_21085 | | GntR family transcriptional regulator | insig. | 29 | 95 |
| | Variovorax sp. SCN45 | GFF6145 | | 2-aminoethylphosphonate utilization transcriptional regulator, GntR family | sig. | 28 | 95 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_00905 | | GntR family transcriptional regulator | sig. | 28 | 95 |
| o | Pseudomonas putida KT2440 | PP_2333 | | GntR family transcriptional regulator | strong | 28 | 95 |
| o | Pseudomonas segetis P6 | MPMX49_02629 | | putative D-xylose utilization operon transcriptional repressor | insig. | 28 | 93 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS08175 | | GntR family transcriptional regulator | insig. | 31 | 87 |
| | Variovorax sp. SCN45 | GFF464 | | Transcriptional regulator, GntR family | insig. | 27 | 87 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3818 | | Propionate catabolism operon transcriptional regulator of GntR family [predicted] | insig. | 28 | 95 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_6060 | | Propionate catabolism operon transcriptional regulator of GntR family [predicted] | strong | 28 | 95 |
| o | Pseudomonas sp. RS175 | PFR28_02929 | | HTH-type transcriptional repressor GlaR | sig. | 28 | 95 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_20860 | | GntR family transcriptional regulator | insig. | 28 | 95 |
| | Variovorax sp. SCN45 | GFF1370 | | Transcriptional regulator associated with Tricarboxylic transport | insig. | 30 | 65 |
| | Azospirillum sp. SherDot2 | MPMX19_04684 | | HTH-type transcriptional repressor RspR | insig. | 28 | 88 |
| o | Pseudomonas sp. DMC3 | GFF5229 | | HTH-type transcriptional repressor GlaR | insig. | 27 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS26360 | | GntR family transcriptional regulator | no data | 28 | 85 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_2084 | | transcriptional regulator, GntR family | sig. | 27 | 93 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2084 | | transcriptional regulator, GntR family | insig. | 27 | 93 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4256.1 | | Transcriptional regulator for ferulate or vanillate catabolism | insig. | 34 | 63 |
| | Rhizobium sp. OAE497 | ABIE40_RS23190 | | FCD domain-containing protein | cofit | 29 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05550 | | DNA-binding transcriptional regulator, GntR family | insig. | 27 | 87 |
| | Sinorhizobium meliloti 1021 | SMc02036 | | transcriptional regulator | insig. | 36 | 65 |
| o | Pseudomonas stutzeri RCH2 | Psest_2322 | | Transcriptional regulators | insig. | 28 | 100 |
| | Rhizobium sp. OAE497 | ABIE40_RS23455 | | GntR family transcriptional regulator | strong | 31 | 90 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS18000 | | hypothetical protein | strong | 30 | 90 |
| o | Escherichia coli ECOR38 | HEPCGN_26935 | ydfH | DNA-binding transcriptional regulator YdfH | insig. | 27 | 89 |
| o | Escherichia coli BL21 | ECD_01499 | | transcriptional repressor for rspAB | no data | 27 | 89 |
| o | Escherichia fergusonii Becca | EFB2_02416 | | HTH-type transcriptional repressor RspR | sig. | 27 | 89 |
| o | Escherichia coli ECOR27 | NOLOHH_18635 | ydfH | DNA-binding transcriptional regulator YdfH | no data | 27 | 89 |
| o | Escherichia coli ECRC100 | OKFHMN_01010 | ydfH | DNA-binding transcriptional regulator YdfH | no data | 27 | 89 |
| o | Escherichia coli ECRC101 | MCAODC_16915 | ydfH | DNA-binding transcriptional regulator YdfH | insig. | 27 | 89 |
| o | Escherichia coli ECRC102 | NIAGMN_25155 | ydfH | DNA-binding transcriptional regulator YdfH | insig. | 27 | 89 |
| o | Escherichia coli ECRC62 | BNILDI_17125 | ydfH | DNA-binding transcriptional regulator YdfH | insig. | 27 | 89 |
| o | Escherichia coli ECRC98 | JDDGAC_03520 | ydfH | DNA-binding transcriptional regulator YdfH | sig. | 27 | 89 |
| o | Escherichia coli ECRC99 | KEDOAH_27420 | ydfH | DNA-binding transcriptional regulator YdfH | no data | 27 | 89 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02172 | | HTH-type transcriptional repressor RspR | insig. | 27 | 89 |
| o | Escherichia coli BW25113 | b1540 | ydfH | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 27 | 89 |
| o | Xanthobacter sp. DMC5 | GFF2581 | | HTH-type transcriptional repressor GlaR | insig. | 26 | 90 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06205 | | transcriptional regulator, GntR family | insig. | 32 | 63 |
| o | Pseudomonas sp. SVBP6 | COO64_RS09895 | | GntR family transcriptional regulator | insig. | 28 | 95 |
| o | Pseudomonas sp. S08-1 | OH686_01695 | | Propionate catabolism operon transcriptional regulator of GntR family | cofit | 26 | 97 |
| | Rhodospirillum rubrum S1H | Rru_A3139 | | Transcriptional Regulator, GntR family (NCBI) | strong | 29 | 77 |
| | Xanthobacter sp. DMC5 | GFF1609 | | HTH-type transcriptional repressor RspR | insig. | 33 | 62 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS08815 | | DNA-binding transcriptional regulator rspR | no data | 26 | 87 |
| | Variovorax sp. OAS795 | ABID97_RS17485 | | GntR family transcriptional regulator | insig. | 26 | 87 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS09485 | | GntR family transcriptional regulator | strong | 31 | 65 |
| | Bosea sp. OAE506 | ABIE41_RS18550 | | GntR family transcriptional regulator | insig. | 28 | 87 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS01175 | | GntR family transcriptional regulator | insig. | 27 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03842 | | transcriptional regulator, GntR family | no data | 31 | 65 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4119 | | Propionate catabolism operon transcriptional regulator of GntR family [predicted] | sig. | 27 | 95 |
| | Bosea sp. OAE506 | ABIE41_RS20680 | | GntR family transcriptional regulator | sig. | 31 | 60 |
| o | Rahnella sp. WP5 | EX31_RS20380 | | GntR family transcriptional regulator | insig. | 26 | 87 |
| o | Klebsiella michiganensis M5al | BWI76_RS15480 | | GntR family transcriptional regulator | strong | 26 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37050 | | GntR family transcriptional regulator | insig. | 30 | 67 |
| | Phaeobacter inhibens DSM 17395 | PGA1_262p00270 | | transcriptional regulator, GntR family | insig. | 29 | 72 |
| | Azospirillum brasilense Sp245 | AZOBR_RS22370 | | transcriptional regulator | insig. | 28 | 84 |
| | Variovorax sp. SCN45 | GFF930 | | Transcriptional regulator, GntR family | insig. | 27 | 91 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS23830 | | transcriptional regulator | insig. | 27 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03357 | | transcriptional regulator, GntR family | no data | 27 | 90 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01374 | | transcriptional regulator, GntR family | insig. | 31 | 65 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31385 | | GntR family transcriptional regulator | strong | 29 | 79 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_03450 | | GntR family transcriptional regulator | insig. | 28 | 97 |
| | Xanthobacter sp. DMC5 | GFF2533 | | HTH-type transcriptional repressor RspR | insig. | 27 | 84 |
| | Xanthobacter sp. DMC5 | GFF1498 | | putative D-xylose utilization operon transcriptional repressor | insig. | 24 | 91 |