Homologs of SO3484 from Shewanella oneidensis MR-1

AcrB/AcrD/AcrF family protein (NCBI ptt file)
SEED: RND multidrug efflux transporter; Acriflavin resistance protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3484 AcrB/AcrD/AcrF family protein (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_1083 acriflavin resistance protein (RefSeq) insig. 97 100
o Shewanella loihica PV-4 Shew_1178 acriflavin resistance protein (RefSeq) insig. 80 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_04695 AcrB/AcrD/AcrF family protein insig. 76 98
  Shewanella loihica PV-4 Shew_1852 acriflavin resistance protein (RefSeq) strong 47 98
  Shewanella sp. ANA-3 Shewana3_1659 acriflavin resistance protein (RefSeq) insig. 46 98
  Shewanella amazonensis SB2B Sama_1905 AcrB/AcrD/AcrF family protein (RefSeq) strong 46 98
  Shewanella oneidensis MR-1 SO1882 AcrB/AcrD/AcrF family protein (NCBI ptt file) insig. 46 98
  Alteromonas macleodii MIT1002 MIT1002_00729 putative efflux pump membrane transporter TtgB insig. 45 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1262.1 RND multidrug efflux transporter; Acriflavin resistance protein insig. 44 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3804 Cation/multidrug efflux pump insig. 44 99
  Marinobacter adhaerens HP15 HP15_3693 multidrug resistance protein insig. 41 100
  Lysobacter sp. OAE881 ABIE51_RS16985 efflux RND transporter permease subunit insig. 43 98
  Rhodospirillum rubrum S1H Rru_A2094 Acriflavin resistance protein (NCBI) insig. 41 99
  Azospirillum brasilense Sp245 AZOBR_RS22130 acriflavin resistance protein insig. 40 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0681 Cation/multidrug efflux pump cofit 39 97
  Pseudomonas sp. S08-1 OH686_22670 RND efflux system, inner membrane transporter cofit 38 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein insig. 39 98
  Azospirillum sp. SherDot2 MPMX19_04343 Efflux pump membrane transporter BepE insig. 39 96
  Dechlorosoma suillum PS Dsui_1555 cation/multidrug efflux pump cofit 39 96
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19050 efflux RND transporter permease subunit insig. 38 97
  Acidovorax sp. GW101-3H11 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein insig. 39 96
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07780 efflux RND transporter permease subunit insig. 39 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13040 acriflavin resistance protein insig. 37 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17650 acriflavin resistance protein insig. 37 96
  Caulobacter crescentus NA1000 CCNA_01262 cation/multidrug efflux pump, AcrB family cofit 40 99
  Caulobacter crescentus NA1000 Δfur CCNA_01262 cation/multidrug efflux pump, AcrB family insig. 40 99
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05470 efflux RND transporter permease subunit insig. 37 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13825 efflux RND transporter permease subunit insig. 37 96
  Bacteroides ovatus ATCC 8483 BACOVA_03090 RND transporter, HAE1 family insig. 37 96
  Phocaeicola dorei CL03T12C01 ABI39_RS09435 efflux RND transporter permease subunit insig. 37 96
  Bacteroides thetaiotaomicron VPI-5482 BT2252 multidrug efflux membrane fusion protein (NCBI ptt file) insig. 37 96
  Bacteroides stercoris CC31F HMPREF1181_RS09455 efflux RND transporter permease subunit insig. 37 96
  Sinorhizobium meliloti 1021 SMc01457 transport transmembrane protein strong 36 98
  Agrobacterium fabrum C58 Atu2054 AcrB/AcrD/AcrF family protein insig. 35 99
  Rhizobium sp. OAE497 ABIE40_RS11655 efflux RND transporter permease subunit insig. 36 97
  Pseudomonas aeruginosa PA14 IKLFDK_02225 multidrug efflux RND transporter permease subunit MexW insig. 35 98
  Pseudomonas fluorescens SBW25 PFLU_RS24405 multidrug efflux RND transporter permease subunit insig. 35 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24405 multidrug efflux RND transporter permease subunit insig. 35 96
  Pseudomonas simiae WCS417 PS417_22755 acriflavine resistance protein B insig. 34 96
  Pseudomonas sp. BP01 JOY50_RS14955 multidrug efflux RND transporter permease subunit insig. 35 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_00850 multidrug resistance protein cofit 35 99
  Pseudomonas sp. S08-1 OH686_17360 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) strong 34 97
  Pseudomonas putida KT2440 PP_0906 putative Multidrug efflux RND transporter insig. 35 97
  Pseudomonas sp. BP01 JOY50_RS22265 MexW/MexI family multidrug efflux RND transporter permease subunit insig. 36 96
  Pseudomonas putida KT2440 PP_2065 Multidrug efflux RND transporter insig. 35 96
  Pseudomonas sp. RS175 PFR28_03330 Multidrug efflux pump subunit AcrB insig. 34 96
  Pseudomonas fluorescens FW300-N2E3 AO353_04000 acriflavine resistance protein B insig. 35 96
  Pseudomonas stutzeri RCH2 Psest_1153 Cation/multidrug efflux pump strong 34 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5614 RND multidrug efflux transporter; Acriflavin resistance protein insig. 33 96
  Marinobacter adhaerens HP15 HP15_3262 multidrug resistance protein strong 34 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_720 RND multidrug efflux transporter; Acriflavin resistance protein insig. 34 96
  Rhodospirillum rubrum S1H Rru_A3699 Acriflavin resistance protein (NCBI) strong 34 96
  Pseudomonas fluorescens FW300-N2C3 AO356_18440 acriflavine resistance protein B sig. 33 96
  Pseudomonas sp. SVBP6 COO64_RS12055 multidrug efflux RND transporter permease subunit insig. 34 97
  Azospirillum brasilense Sp245 AZOBR_RS31320 acriflavine resistance protein B strong 34 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1771 RND multidrug efflux transporter; Acriflavin resistance protein insig. 34 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1217 RND multidrug efflux transporter; Acriflavin resistance protein cofit 34 98
  Rhodopseudomonas palustris CGA009 TX73_019545 MexW/MexI family multidrug efflux RND transporter permease subunit cofit 35 96
  Pseudomonas sp. DMC3 GFF5069 Multidrug efflux pump subunit AcrB cofit 33 96
  Variovorax sp. SCN45 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system insig. 34 98
  Pseudomonas sp. SVBP6 COO64_RS10725 MexW/MexI family multidrug efflux RND transporter permease subunit insig. 35 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS42075 efflux RND transporter permease subunit insig. 34 97
  Pseudomonas aeruginosa PA14 IKLFDK_21660 multidrug efflux RND transporter permease MexI insig. 34 99
  Magnetospirillum magneticum AMB-1 AMB_RS17260 acriflavine resistance protein B cofit 34 96
  Shewanella sp. ANA-3 Shewana3_0371 acriflavin resistance protein (RefSeq) insig. 33 97
  Alteromonas macleodii MIT1002 MIT1002_01303 Efflux pump membrane transporter BepE insig. 34 99
  Shewanella amazonensis SB2B Sama_3269 putative multidrug resistance protein (RefSeq) strong 33 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS26025 efflux RND transporter permease subunit insig. 34 97
  Azospirillum sp. SherDot2 MPMX19_05610 Efflux pump membrane transporter BepE insig. 34 96
  Burkholderia phytofirmans PsJN BPHYT_RS29560 acriflavine resistance protein B insig. 33 97
  Pseudomonas fluorescens SBW25 PFLU_RS24395 multidrug efflux RND transporter permease subunit insig. 33 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24395 multidrug efflux RND transporter permease subunit insig. 33 97
  Variovorax sp. SCN45 GFF266 RND efflux system, inner membrane transporter insig. 33 97
  Synechocystis sp000284455 PCC 6803 SGL_RS09605 efflux RND transporter permease subunit cofit 33 97
  Dechlorosoma suillum PS Dsui_1871 hydrophobe/amphiphile efflux-1 (HAE1) family transporter strong 32 96
  Shewanella loihica PV-4 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 34 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08425 efflux RND transporter permease subunit insig. 32 96
  Pseudomonas putida KT2440 PP_3583 multidrug efflux transport system - membrane subunit sig. 33 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU0061 multidrug resistance protein, putative (TIGR) strong 31 96
  Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 32 96
  Azospirillum brasilense Sp245 AZOBR_RS14670 multidrug transporter insig. 32 96
  Pseudomonas sp. BP01 JOY50_RS07345 efflux RND transporter permease subunit cofit 33 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3265 Acriflavin resistance plasma membrane protein insig. 31 97
  Pseudomonas fluorescens FW300-N2E3 AO353_22900 acriflavine resistance protein B insig. 31 97
  Methylophilus sp. DMC18 GFF1649 Efflux pump membrane transporter BepE cofit 32 97
  Enterobacter sp. TBS_079 MPMX20_03331 Multidrug efflux pump subunit AcrB insig. 31 96
  Pseudomonas sp. DMC3 GFF3506 Multidrug resistance protein MdtC insig. 32 96
  Burkholderia phytofirmans PsJN BPHYT_RS20640 multidrug efflux RND transporter permease subunit insig. 32 96
  Xanthobacter sp. DMC5 GFF2738 Efflux pump membrane transporter BepE insig. 32 97
  Enterobacter asburiae PDN3 EX28DRAFT_0191 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 31 96
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06015 efflux RND transporter permease subunit cofit 30 95
  Azospirillum brasilense Sp245 AZOBR_RS14655 nodulation protein NolG strong 32 99
  Desulfovibrio vulgaris Miyazaki F DvMF_1515 acriflavin resistance protein (RefSeq) strong 31 95
  Serratia liquefaciens MT49 IAI46_18690 multidrug efflux RND transporter permease AcrD insig. 31 96
  Phocaeicola dorei CL03T12C01 ABI39_RS18010 efflux RND transporter permease subunit insig. 30 95
  Rhodanobacter sp. FW510-T8 OKGIIK_11990 acrB acriflavine resistance protein B cofit 30 96
  Azospirillum sp. SherDot2 MPMX19_01439 Multidrug resistance protein MdtC insig. 31 96
  Sinorhizobium meliloti 1021 SMa1662 Cation/multidrug efflux pump insig. 32 96
  Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 31 96