Homologs of prpB from Shewanella oneidensis MR-1

prpB: methylisocitrate lyase (NCBI ptt file)
SEED: Methylisocitrate lyase (EC 4.1.3.30)
KEGG: methylisocitrate lyase

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO0345 prpB methylisocitrate lyase (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) strong 99 100
o Shewanella amazonensis SB2B Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) strong 89 100
o Shewanella loihica PV-4 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) strong 72 99
o Marinobacter adhaerens HP15 HP15_1932 methylisocitrate lyase 2 no data 70 99
o Alteromonas macleodii MIT1002 MIT1002_03129 Methylisocitrate lyase strong 69 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS16745 methylisocitrate lyase strong 68 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS22820 methylisocitrate lyase insig. 67 99
o Ralstonia solanacearum UW163 UW163_RS23440 methylisocitrate lyase insig. 67 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_06735 methylisocitrate lyase cofit 65 99
o Ralstonia solanacearum GMI1000 RS_RS17740 methylisocitrate lyase insig. 67 99
o Ralstonia solanacearum PSI07 RPSI07_RS00400 methylisocitrate lyase insig. 67 99
o Lysobacter sp. OAE881 ABIE51_RS06015 methylisocitrate lyase sig. 64 100
o Rhodanobacter denitrificans MT42 LRK55_RS00470 methylisocitrate lyase strong 65 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00695 methylisocitrate lyase strong 65 99
o Rhodanobacter sp. FW510-T8 OKGIIK_06565 prpB methylisocitrate lyase sig. 65 99
o Acinetobacter radioresistens SK82 MPMX26_01289 2-methylisocitrate lyase no data 63 100
  Ralstonia solanacearum UW163 UW163_RS11055 methylisocitrate lyase insig. 62 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02670 methylisocitrate lyase insig. 62 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS14590 methylisocitrate lyase insig. 62 99
  Ralstonia solanacearum PSI07 RPSI07_RS14645 methylisocitrate lyase insig. 62 99
o Pseudomonas stutzeri RCH2 Psest_2321 methylisocitrate lyase strong 63 99
o Pseudomonas fluorescens FW300-N2E3 AO353_00900 2-methylisocitrate lyase strong 62 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) strong 62 99
o Cupriavidus basilensis FW507-4G11 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) strong 62 100
o Pseudomonas putida KT2440 PP_2334 2-methylisocitrate lyase strong 61 100
o Pseudomonas sp. RS175 PFR28_02928 2-methylisocitrate lyase strong 62 99
o Pseudomonas fluorescens FW300-N2C3 AO356_20865 2-methylisocitrate lyase strong 62 99
o Pseudomonas fluorescens SBW25 PFLU_RS22690 methylisocitrate lyase insig. 62 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22690 methylisocitrate lyase strong 62 99
  Ralstonia solanacearum GMI1000 RS_RS10050 methylisocitrate lyase insig. 61 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) sig. 61 99
o Pseudomonas simiae WCS417 PS417_21080 2-methylisocitrate lyase no data 61 99
o Kangiella aquimarina DSM 16071 B158DRAFT_1343 methylisocitrate lyase strong 60 99
o Herbaspirillum seropedicae SmR1 HSERO_RS15660 2-methylisocitrate lyase no data 61 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS31070 methylisocitrate lyase insig. 67 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) strong 60 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) insig. 61 99
o Pseudomonas syringae pv. syringae B728a Psyr_2085 methylisocitrate lyase insig. 60 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2085 methylisocitrate lyase insig. 60 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03339 2-methylisocitrate lyase insig. 60 99
o Castellaniella sp019104865 MT123 ABCV34_RS01670 methylisocitrate lyase strong 60 99
o Escherichia coli ECOR38 HEPCGN_07485 prpB methylisocitrate lyase cofit 60 99
o Escherichia coli BL21 ECD_00286 2-methylisocitrate lyase insig. 60 99
o Escherichia coli ECOR27 NOLOHH_01775 prpB methylisocitrate lyase insig. 60 99
o Escherichia coli ECRC62 BNILDI_23190 prpB methylisocitrate lyase insig. 60 99
o Escherichia coli BW25113 b0331 prpB 2-methylisocitrate lyase (NCBI) sig. 60 99
o Escherichia fergusonii Becca EFB2_03706 2-methylisocitrate lyase insig. 60 99
o Escherichia coli ECRC101 OKFHMN_08900 prpB methylisocitrate lyase insig. 60 99
o Escherichia coli ECRC101 MCAODC_28130 prpB methylisocitrate lyase insig. 60 99
o Escherichia coli ECRC102 NIAGMN_06955 prpB methylisocitrate lyase insig. 60 99
o Escherichia coli ECRC98 JDDGAC_12555 prpB methylisocitrate lyase no data 60 99
o Escherichia coli ECRC99 KEDOAH_19065 prpB methylisocitrate lyase no data 60 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS17555 methylisocitrate lyase insig. 63 94
o Escherichia coli Nissle 1917 ECOLIN_RS02150 methylisocitrate lyase cofit 60 99
o Pseudomonas sp. S08-1 OH686_01690 methylisocitrate lyase strong 58 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3981.1 Methylisocitrate lyase (EC 4.1.3.30) strong 58 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS08480 methylisocitrate lyase strong 59 99
o Rhodospirillum rubrum S1H Rru_A2320 Ankyrin (NCBI) insig. 44 96
o Rhodopseudomonas palustris CGA009 TX73_012370 methylisocitrate lyase insig. 44 96
  Cupriavidus basilensis FW507-4G11 RR42_RS22175 carboxyvinyl-carboxyphosphonate phosphorylmutase insig. 45 87
  Variovorax sp. SCN45 GFF268 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) strong 47 79
  Variovorax sp. OAS795 ABID97_RS19370 isocitrate lyase/PEP mutase family protein insig. 47 79
  Variovorax sp. OAS795 ABID97_RS18835 oxaloacetate decarboxylase insig. 42 90
o Azospirillum sp. SherDot2 MPMX19_04657 2,3-dimethylmalate lyase insig. 41 89
  Variovorax sp. SCN45 GFF1663 Isocitrate lyase (EC 4.1.3.1) strong 45 79
o Acidovorax sp. GW101-3H11 Ac3H11_2326 Methylisocitrate lyase (EC 4.1.3.30) insig. 44 86
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06209 carboxyvinyl-carboxyphosphonate phosphorylmutase insig. 37 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3032 Methylisocitrate lyase (EC 4.1.3.30) no data 39 90
o Burkholderia phytofirmans PsJN BPHYT_RS26855 carboxyvinyl-carboxyphosphonate phosphorylmutase sig. 44 86
o Paraburkholderia graminis OAS925 ABIE53_005902 2-methylisocitrate lyase-like PEP mutase family enzyme strong 41 88
o Bosea sp. OAE506 ABIE41_RS16605 isocitrate lyase/PEP mutase family protein insig. 41 91
o Azospirillum brasilense Sp245 AZOBR_RS24315 carboxyvinyl-carboxyphosphonate phosphorylmutase insig. 39 92
  Cupriavidus basilensis FW507-4G11 RR42_RS22765 carboxyvinyl-carboxyphosphonate phosphorylmutase insig. 42 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02892 carboxyvinyl-carboxyphosphonate phosphorylmutase insig. 41 82
  Variovorax sp. SCN45 GFF1681 Methylisocitrate lyase (EC 4.1.3.30) insig. 42 76
o Dinoroseobacter shibae DFL-12 Dshi_0689 isocitrate lyase family protein (RefSeq) sig. 40 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00986 2-Methylisocitrate lyase, PEP mutase family insig. 33 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1578 Methylisocitrate lyase (EC 4.1.3.30) insig. 36 85
  Burkholderia phytofirmans PsJN BPHYT_RS25670 carboxyvinyl-carboxyphosphonate phosphorylmutase insig. 31 92
  Dinoroseobacter shibae DFL-12 Dshi_1092 carboxyvinyl-carboxyphosphonatephosphorylmutase (RefSeq) insig. 36 95
  Azospirillum brasilense Sp245 AZOBR_RS27785 carboxyvinyl-carboxyphosphonate phosphorylmutase insig. 32 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02542 2-Methylisocitrate lyase, PEP mutase family insig. 35 92
  Azospirillum brasilense Sp245 AZOBR_RS27820 carboxyvinyl-carboxyphosphonate phosphorylmutase insig. 40 74
  Azospirillum sp. SherDot2 MPMX19_02797 2,3-dimethylmalate lyase insig. 34 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5012 putative methylisocitrate lyase insig. 33 70
  Paraburkholderia graminis OAS925 ABIE53_002637 methylisocitrate lyase insig. 34 95
  Pseudomonas fluorescens SBW25 PFLU_RS15145 oxaloacetate decarboxylase insig. 31 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15145 oxaloacetate decarboxylase sig. 31 83
  Pseudomonas simiae WCS417 PS417_13705 oxaloacetate decarboxylase sig. 30 89
  Pseudomonas stutzeri RCH2 Psest_0551 PEP phosphonomutase and related enzymes sig. 30 87
  Rhodopseudomonas palustris CGA009 TX73_016415 isocitrate lyase/PEP mutase family protein insig. 30 92
  Pseudomonas sp. RS175 PFR28_01266 Oxaloacetate decarboxylase sig. 31 81
  Pseudomonas putida KT2440 PP_1389 Oxaloacetate decarboxylase insig. 30 83
  Pseudomonas syringae pv. syringae B728a Psyr_1256 carboxyphosphonoenolpyruvate phosphonomutase insig. 29 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1256 carboxyphosphonoenolpyruvate phosphonomutase insig. 29 87
  Pseudomonas fluorescens FW300-N2C3 AO356_01550 oxaloacetate decarboxylase insig. 31 81
  Pseudomonas sp. S08-1 OH686_07765 Oxaloacetate decarboxylase cofit 28 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2185 carboxyphosphonoenolpyruvate phosphonomutase, putative insig. 30 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5858 carboxyphosphonoenolpyruvate phosphonomutase, putative strong 30 81