Conservation of cofitness between Xcc-8004.2169.1 and Xcc-8004.4039.1 in Xanthomonas campestris pv. campestris strain 8004

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2169.1 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 1.0 Xcc-8004.4039.1 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.36 8
Lysobacter sp. OAE881 0.63 ABIE51_RS15015 preprotein translocase subunit YajC 0.55 ABIE51_RS14120 peptidyl-prolyl cis-trans isomerase low > 62
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_09995 yajC preprotein translocase subunit YajC 0.34 OKGIIK_08010 Peptidylprolyl isomerase 0.68 8
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02875 preprotein translocase subunit YajC 0.34 LRK55_RS16480 SurA N-terminal domain-containing protein — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS03125 preprotein translocase subunit YajC 0.34 LRK54_RS16755 SurA N-terminal domain-containing protein 0.93 3
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS09535 preprotein translocase subunit YajC 0.32 ABZR86_RS07300 SurA N-terminal domain-containing protein 0.53 7
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS05690 preprotein translocase subunit YajC 0.19 RALBFv3_RS01320 peptidylprolyl isomerase low > 76
Ralstonia solanacearum UW163 0.50 UW163_RS07935 preprotein translocase subunit YajC 0.19 UW163_RS14630 peptidylprolyl isomerase — —
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS26645 preprotein translocase subunit YajC 0.18 QEN71_RS21955 SurA N-terminal domain-containing protein — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS01285 preprotein translocase subunit YajC 0.17 ABZR87_RS12765 SurA N-terminal domain-containing protein 0.42 70
Marinobacter adhaerens HP15 0.46 HP15_1480 preprotein translocase, YajC subunit 0.20 HP15_2181 PpiC-type peptidyl-prolyl cis-trans isomerase — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS11610 preprotein translocase subunit YajC 0.19 RPSI07_RS16155 peptidylprolyl isomerase — —
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS17405 preprotein translocase subunit YajC 0.18 RR42_RS09045 peptidylprolyl isomerase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_000830 preprotein translocase subunit YajC 0.17 ABIE53_002134 peptidyl-prolyl cis-trans isomerase D low > 113
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS03415 preprotein translocase subunit YajC 0.16 BPHYT_RS09480 peptidyl-prolyl cis-trans isomerase — —
Ralstonia solanacearum GMI1000 0.45 RS_RS13580 preprotein translocase subunit YajC 0.18 RS_RS08675 peptidyl-prolyl cis-trans isomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF2567 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.16 GFF3854 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 90
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS06215 preprotein translocase subunit YajC 0.17 HSERO_RS11155 peptidyl-prolyl cis-trans isomerase — —
Dechlorosoma suillum PS 0.44 Dsui_3324 preprotein translocase, YajC subunit 0.21 Dsui_2202 parvulin-like peptidyl-prolyl isomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04669 protein translocase subunit yajC 0.16 H281DRAFT_00902 peptidyl-prolyl cis-trans isomerase D — —
Castellaniella sp019104865 MT123 0.44 ABCV34_RS15360 preprotein translocase subunit YajC 0.17 ABCV34_RS03085 SurA N-terminal domain-containing protein — —
Variovorax sp. SCN45 0.42 GFF5484 Protein translocase subunit YajC 0.17 GFF2852 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.47 126
Pseudomonas stutzeri RCH2 0.42 Psest_1243 preprotein translocase, YajC subunit 0.20 Psest_2283 Parvulin-like peptidyl-prolyl isomerase — —
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2517 preprotein translocase, YajC subunit 0.18 B158DRAFT_1042 Parvulin-like peptidyl-prolyl isomerase — —
Pseudomonas sp. S08-1 0.40 OH686_17435 preprotein translocase, YajC subunit 0.20 OH686_03625 Peptidyl-prolyl cis-trans isomerase PpiD low > 80
Escherichia coli BL21 0.39 ECD_00355 SecYEG protein translocase auxillary subunit 0.16 ECD_00393 periplasmic folding chaperone, has an inactive PPIase domain — —
Escherichia coli ECOR27 0.39 NOLOHH_01435 yajC preprotein translocase subunit YajC 0.16 NOLOHH_01245 ppiD peptidylprolyl isomerase — —
Escherichia fergusonii Becca 0.39 EFB2_03650 Sec translocon accessory complex subunit YajC 0.16 EFB2_03616 Peptidyl-prolyl cis-trans isomerase D — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03269 Sec translocon accessory complex subunit YajC 0.16 OHPLBJKB_03232 Peptidyl-prolyl cis-trans isomerase D — —
Escherichia coli ECRC101 0.39 MCAODC_27725 yajC preprotein translocase subunit YajC 0.16 MCAODC_27535 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC102 0.39 NIAGMN_06555 yajC preprotein translocase subunit YajC 0.16 NIAGMN_06365 ppiD peptidylprolyl isomerase — —
Escherichia coli Nissle 1917 0.39 ECOLIN_RS26255 preprotein translocase subunit YajC 0.16 ECOLIN_RS02645 peptidylprolyl isomerase — —
Escherichia coli ECRC100 0.39 OKFHMN_08500 yajC preprotein translocase subunit YajC 0.16 OKFHMN_08310 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC62 0.39 BNILDI_22850 yajC preprotein translocase subunit YajC 0.16 BNILDI_22660 ppiD peptidylprolyl isomerase — —
Escherichia coli ECRC98 0.39 JDDGAC_12155 yajC preprotein translocase subunit YajC 0.16 JDDGAC_11965 ppiD peptidylprolyl isomerase — —
Escherichia coli ECOR38 0.39 HEPCGN_07140 yajC preprotein translocase subunit YajC 0.16 HEPCGN_06925 ppiD peptidylprolyl isomerase low > 87
Escherichia coli BW25113 0.39 b0407 yajC preprotein translocase subunit YajC (NCBI) 0.16 b0441 ppiD peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) 0.34 13
Escherichia coli ECRC99 0.39 KEDOAH_19465 yajC preprotein translocase subunit YajC 0.16 KEDOAH_19655 ppiD peptidylprolyl isomerase — —
Alteromonas macleodii MIT1002 0.39 MIT1002_02812 preprotein translocase subunit YajC 0.20 MIT1002_02755 Peptidyl-prolyl cis-trans isomerase D low > 70
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_15795 preprotein translocase subunit YajC 0.19 AO353_20200 peptidylprolyl isomerase — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_1229 protein translocase subunit yajC 0.19 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_06685 preprotein translocase subunit YajC 0.19 AO356_01725 peptidylprolyl isomerase — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4881 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.18 PfGW456L13_2556 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_1229 protein translocase subunit yajC 0.19 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase — —
Pseudomonas sp. RS175 0.38 PFR28_00278 Sec translocon accessory complex subunit YajC 0.19 PFR28_01231 Peptidyl-prolyl cis-trans isomerase D — —
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3197 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.18 Pf6N2E2_2214 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) — —
Enterobacter asburiae PDN3 0.38 EX28DRAFT_2564 preprotein translocase, YajC subunit 0.15 EX28DRAFT_2529 Parvulin-like peptidyl-prolyl isomerase — —
Pantoea sp. MT58 0.38 IAI47_14800 preprotein translocase subunit YajC 0.16 IAI47_14635 peptidylprolyl isomerase — —
Enterobacter sp. TBS_079 0.38 MPMX20_00998 Sec translocon accessory complex subunit YajC 0.15 MPMX20_01032 Peptidyl-prolyl cis-trans isomerase D low > 85
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3007 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.18 Pf1N1B4_3949 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF4306 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.14 GFF4357 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) — —
Rahnella sp. WP5 0.38 EX31_RS22100 preprotein translocase subunit YajC 0.13 EX31_RS22265 peptidylprolyl isomerase — —
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS24895 preprotein translocase subunit YajC 0.18 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase — —
Pseudomonas fluorescens SBW25 0.38 PFLU_RS24895 preprotein translocase subunit YajC 0.18 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase — —
Pseudomonas simiae WCS417 0.38 PS417_23240 preprotein translocase subunit YajC 0.18 PS417_17215 peptidylprolyl isomerase — —
Pseudomonas putida KT2440 0.37 PP_0834 Sec translocation complex subunit YajC 0.19 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D 0.15 38
Klebsiella michiganensis M5al 0.37 BWI76_RS06305 preprotein translocase subunit YajC 0.15 BWI76_RS06545 peptidylprolyl isomerase — —
Serratia liquefaciens MT49 0.37 IAI46_04845 preprotein translocase subunit YajC 0.13 IAI46_05030 peptidylprolyl isomerase 0.85 1
Dickeya dianthicola ME23 0.37 DZA65_RS05860 preprotein translocase subunit YajC 0.15 DZA65_RS06030 peptidylprolyl isomerase low > 75
Dickeya dadantii 3937 0.37 DDA3937_RS05475 preprotein translocase subunit YajC 0.16 DDA3937_RS05660 peptidylprolyl isomerase — —
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_03855 preprotein translocase subunit YajC 0.17 CSW01_09595 peptidylprolyl isomerase low > 62
Dickeya dianthicola 67-19 0.37 HGI48_RS05535 preprotein translocase subunit YajC 0.15 HGI48_RS05705 peptidylprolyl isomerase low > 71
Pectobacterium carotovorum WPP14 0.36 HER17_RS15985 preprotein translocase subunit YajC 0.15 HER17_RS15830 peptidylprolyl isomerase — —
Acinetobacter radioresistens SK82 0.36 MPMX26_00437 Sec translocon accessory complex subunit YajC 0.09 MPMX26_01332 Peptidyl-prolyl cis-trans isomerase D — —
Erwinia tracheiphila SCR3 0.34 LU632_RS18505 yajC preprotein translocase subunit YajC 0.12 LU632_RS18325 ppiD peptidylprolyl isomerase low > 74
Shewanella amazonensis SB2B 0.34 Sama_2192 yajC preprotein translocase subunit YajC (RefSeq) 0.21 Sama_1228 peptidyl-prolyl cis-trans isomerase D (RefSeq) — —
Shewanella oneidensis MR-1 0.33 SO3112 yajC preprotein translocase, YajC subunit (NCBI ptt file) 0.22 SO1798 ppiD peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) 0.56 6
Azospirillum brasilense Sp245 0.31 AZOBR_RS15435 preprotein translocase subunit YajC 0.09 AZOBR_RS07495 peptidylprolyl isomerase — —
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_3558 preprotein translocase, YajC subunit 0.08 Ga0059261_0255 SurA N-terminal domain/PPIC-type PPIASE domain — —

Not shown: 10 genomes with orthologs for Xcc-8004.2169.1 only; 11 genomes with orthologs for Xcc-8004.4039.1 only