Conservation of cofitness between Xcc-8004.2169.1 and Xcc-8004.3098.1 in Xanthomonas campestris pv. campestris strain 8004

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2169.1 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 1.0 Xcc-8004.3098.1 Pirin 0.47 2
Lysobacter sp. OAE881 0.63 ABIE51_RS15015 preprotein translocase subunit YajC 0.35 ABIE51_RS12775 pirin family protein low > 62
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS03125 preprotein translocase subunit YajC 0.34 LRK54_RS18120 pirin family protein low > 59
Rhodanobacter denitrificans MT42 0.53 LRK55_RS02875 preprotein translocase subunit YajC 0.34 LRK55_RS17975 pirin family protein
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_09995 yajC preprotein translocase subunit YajC 0.35 OKGIIK_07180 Putative quercetin 2,3-dioxygenase PA1210 low > 52
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS09535 preprotein translocase subunit YajC 0.72 ABZR86_RS14555 pirin family protein low > 74
Ralstonia solanacearum UW163 0.50 UW163_RS07935 preprotein translocase subunit YajC 0.60 UW163_RS10035 pirin family protein
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS05690 preprotein translocase subunit YajC 0.60 RALBFv3_RS03635 pirin family protein low > 76
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS26645 preprotein translocase subunit YajC 0.61 QEN71_RS24860 pirin family protein
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS01285 preprotein translocase subunit YajC 0.59 ABZR87_RS15525 pirin family protein low > 80
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS17405 preprotein translocase subunit YajC 0.62 RR42_RS14795 quercetin 2,3-dioxygenase
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS03415 preprotein translocase subunit YajC 0.60 BPHYT_RS05510 quercetin 2,3-dioxygenase
Paraburkholderia graminis OAS925 0.46 ABIE53_000830 preprotein translocase subunit YajC 0.60 ABIE53_005906 redox-sensitive bicupin YhaK (pirin superfamily) low > 113
Ralstonia solanacearum PSI07 0.46 RPSI07_RS11610 preprotein translocase subunit YajC 0.57 RPSI07_RS13595 pirin family protein
Ralstonia solanacearum GMI1000 0.45 RS_RS13580 preprotein translocase subunit YajC 0.58 RS_RS11080 pirin family protein
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF2567 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.56 GFF5180 Pirin low > 90
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS06215 preprotein translocase subunit YajC 0.63 HSERO_RS17840 quercetin 2,3-dioxygenase
Variovorax sp. OAS795 0.44 ABID97_RS01855 preprotein translocase subunit YajC 0.59 ABID97_RS18010 pirin family protein low > 91
Dechlorosoma suillum PS 0.44 Dsui_3324 preprotein translocase, YajC subunit 0.47 Dsui_1259 Pirin-related protein
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04669 protein translocase subunit yajC 0.62 H281DRAFT_02888 hypothetical protein
Castellaniella sp019104865 MT123 0.44 ABCV34_RS15360 preprotein translocase subunit YajC 0.32 ABCV34_RS15525 pirin family protein
Variovorax sp. SCN45 0.42 GFF5484 Protein translocase subunit YajC 0.60 GFF589 Pirin low > 127
Pseudomonas stutzeri RCH2 0.42 Psest_1243 preprotein translocase, YajC subunit 0.31 Psest_1579 Pirin-related protein
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_2517 preprotein translocase, YajC subunit 0.50 B158DRAFT_1252 Pirin-related protein
Pseudomonas sp. S08-1 0.40 OH686_17435 preprotein translocase, YajC subunit 0.37 OH686_19590 Pirin low > 80
Escherichia fergusonii Becca 0.39 EFB2_03650 Sec translocon accessory complex subunit YajC 0.50 EFB2_00381 Quercetin 2,3-dioxygenase
Escherichia coli ECRC102 0.39 NIAGMN_06555 yajC preprotein translocase subunit YajC 0.50 NIAGMN_14600 yhhW quercetin 2,3-dioxygenase
Escherichia coli BL21 0.39 ECD_00355 SecYEG protein translocase auxillary subunit 0.50 ECD_03290 quercetinase activity in vitro
Escherichia coli ECRC62 0.39 BNILDI_22850 yajC preprotein translocase subunit YajC 0.50 BNILDI_02875 yhhW quercetin 2,3-dioxygenase
Escherichia coli Nissle 1917 0.39 ECOLIN_RS26255 preprotein translocase subunit YajC 0.50 ECOLIN_RS19680 quercetin 2,3-dioxygenase
Escherichia coli ECRC101 0.39 MCAODC_27725 yajC preprotein translocase subunit YajC 0.50 MCAODC_07360 yhhW quercetin 2,3-dioxygenase
Escherichia coli ECRC99 0.39 KEDOAH_19465 yajC preprotein translocase subunit YajC 0.50 KEDOAH_11310 yhhW quercetin 2,3-dioxygenase
Escherichia coli ECRC100 0.39 OKFHMN_08500 yajC preprotein translocase subunit YajC 0.50 OKFHMN_16830 yhhW quercetin 2,3-dioxygenase
Escherichia coli BW25113 0.39 b0407 yajC preprotein translocase subunit YajC (NCBI) 0.50 b3439 yhhW hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03269 Sec translocon accessory complex subunit YajC 0.50 OHPLBJKB_00263 Quercetin 2,3-dioxygenase
Escherichia coli ECOR27 0.39 NOLOHH_01435 yajC preprotein translocase subunit YajC 0.50 NOLOHH_08630 yhhW quercetin 2,3-dioxygenase
Escherichia coli ECOR38 0.39 HEPCGN_07140 yajC preprotein translocase subunit YajC 0.50 HEPCGN_15655 yhhW quercetin 2,3-dioxygenase low > 87
Escherichia coli ECRC98 0.39 JDDGAC_12155 yajC preprotein translocase subunit YajC 0.50 JDDGAC_20460 yhhW quercetin 2,3-dioxygenase
Alteromonas macleodii MIT1002 0.39 MIT1002_02812 preprotein translocase subunit YajC 0.42 MIT1002_02155 Quercetin 2,3-dioxygenase low > 70
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_15795 preprotein translocase subunit YajC 0.58 AO353_22230 quercetin 2,3-dioxygenase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_1229 protein translocase subunit yajC 0.57 Psyr_3608 Pirin, N-terminal
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3197 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.57 Pf6N2E2_249 Pirin
Pseudomonas sp. RS175 0.38 PFR28_00278 Sec translocon accessory complex subunit YajC 0.55 PFR28_02653 Quercetin 2,3-dioxygenase
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4881 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.58 PfGW456L13_3871 Pirin
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_1229 protein translocase subunit yajC 0.57 Psyr_3608 Pirin, N-terminal
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_06685 preprotein translocase subunit YajC 0.56 AO356_21940 quercetin 2,3-dioxygenase low > 104
Pantoea sp. MT58 0.38 IAI47_14800 preprotein translocase subunit YajC 0.53 IAI47_20325 pirin family protein
Enterobacter asburiae PDN3 0.38 EX28DRAFT_2564 preprotein translocase, YajC subunit 0.49 EX28DRAFT_4275 Pirin-related protein
Enterobacter sp. TBS_079 0.38 MPMX20_00998 Sec translocon accessory complex subunit YajC 0.48 MPMX20_04320 Quercetin 2,3-dioxygenase low > 85
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3007 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.59 Pf1N1B4_5921 Pirin
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF4306 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.49 GFF569 Qercetin 2,3-dioxygenase
Rahnella sp. WP5 0.38 EX31_RS22100 preprotein translocase subunit YajC 0.54 EX31_RS16735 pirin family protein
Pseudomonas fluorescens SBW25 0.38 PFLU_RS24895 preprotein translocase subunit YajC 0.55 PFLU_RS18100 pirin family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS24895 preprotein translocase subunit YajC 0.55 PFLU_RS18100 pirin family protein
Pseudomonas simiae WCS417 0.38 PS417_23240 preprotein translocase subunit YajC 0.56 PS417_16130 quercetin 2,3-dioxygenase
Klebsiella michiganensis M5al 0.37 BWI76_RS06305 preprotein translocase subunit YajC 0.50 BWI76_RS26250 quercetin 2,3-dioxygenase
Serratia liquefaciens MT49 0.37 IAI46_04845 preprotein translocase subunit YajC 0.49 IAI46_23970 pirin family protein low > 86
Pseudomonas putida KT2440 0.37 PP_0834 Sec translocation complex subunit YajC 0.36 PP_2564 putative Quercetin 2,3-dioxygenase low > 96
Dickeya dianthicola ME23 0.37 DZA65_RS05860 preprotein translocase subunit YajC 0.50 DZA65_RS20995 pirin family protein low > 75
Dickeya dadantii 3937 0.37 DDA3937_RS05475 preprotein translocase subunit YajC 0.50 DDA3937_RS19795 pirin family protein
Dickeya dianthicola 67-19 0.37 HGI48_RS05535 preprotein translocase subunit YajC 0.50 HGI48_RS19950 pirin family protein low > 71
Pectobacterium carotovorum WPP14 0.36 HER17_RS15985 preprotein translocase subunit YajC 0.48 HER17_RS01445 pirin family protein
Acinetobacter radioresistens SK82 0.36 MPMX26_00437 Sec translocon accessory complex subunit YajC 0.39 MPMX26_02373 Quercetin 2,3-dioxygenase
Erwinia tracheiphila SCR3 0.34 LU632_RS18505 yajC preprotein translocase subunit YajC 0.46 LU632_RS19155 pirin family protein low > 74
Shewanella amazonensis SB2B 0.34 Sama_2192 yajC preprotein translocase subunit YajC (RefSeq) 0.43 Sama_1390 hypothetical protein (RefSeq)
Azospirillum brasilense Sp245 0.31 AZOBR_RS15435 preprotein translocase subunit YajC 0.55 AZOBR_RS19815 quercetin 2 3-dioxygenase
Bacteroides thetaiotaomicron VPI-5482 0.31 BT4592 conserved hypothetical protein with conserved domain (NCBI ptt file) 0.35 BT1576 conserved hypothetical protein, with a conserved domain (NCBI ptt file)
Phocaeicola vulgatus CL09T03C04 0.31 HMPREF1058_RS04725 preprotein translocase subunit YajC 0.33 HMPREF1058_RS17110 pirin family protein
Phocaeicola dorei CL03T12C01 0.31 ABI39_RS18910 preprotein translocase subunit YajC 0.35 ABI39_RS13035 pirin family protein low > 72
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS16215 preprotein translocase subunit YajC 0.35 HMPREF1078_RS14290 pirin family protein low > 61
Bacteroides ovatus ATCC 8483 0.29 BACOVA_05387 preprotein translocase, YajC subunit 0.36 BACOVA_04317 pirin family protein
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_3558 preprotein translocase, YajC subunit 0.36 Ga0059261_3701 Pirin-related protein

Not shown: 7 genomes with orthologs for Xcc-8004.2169.1 only; 15 genomes with orthologs for Xcc-8004.3098.1 only