Conservation of cofitness between Xcc-8004.2326.1 and Xcc-8004.2929.1 in Xanthomonas campestris pv. campestris strain 8004

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 1.0 Xcc-8004.2929.1 D-2-hydroxyglutarate dehydrogenase 0.72 4
Rhodanobacter denitrificans MT42 0.59 LRK55_RS02130 glutamate 5-kinase 0.73 LRK55_RS02930 FAD-binding oxidoreductase low > 63
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS02375 glutamate 5-kinase 0.72 LRK54_RS03180 FAD-binding oxidoreductase 0.64 41
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_09420 proB glutamate 5-kinase 0.73 OKGIIK_10050 glcD FAD-binding oxidoreductase low > 52
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS08685 glutamate 5-kinase 0.72 ABZR86_RS09630 FAD-binding oxidoreductase low > 74
Lysobacter sp. OAE881 0.53 ABIE51_RS13370 glutamate 5-kinase 0.76 ABIE51_RS13240 FAD-binding oxidoreductase 0.85 8
Ralstonia solanacearum UW163 0.37 UW163_RS07480 glutamate 5-kinase 0.30 UW163_RS15210 FAD-binding oxidoreductase — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS06145 glutamate 5-kinase 0.30 RALBFv3_RS01900 FAD-binding oxidoreductase low > 76
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS01810 glutamate 5-kinase 0.31 ABZR87_RS22450 FAD-binding oxidoreductase low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS11095 glutamate 5-kinase 0.30 RPSI07_RS15590 FAD-binding oxidoreductase low > 81
Ralstonia solanacearum GMI1000 0.36 RS_RS14095 glutamate 5-kinase 0.30 RS_RS07835 FAD-binding oxidoreductase low > 80
Escherichia coli ECRC99 0.36 KEDOAH_18480 proB Glutamate 5-kinase 0.10 KEDOAH_07810 ygcU Uncharacterized FAD-linked oxidoreductase YgcU — —
Escherichia coli ECRC101 0.36 MCAODC_00195 proB Glutamate 5-kinase 0.10 MCAODC_10845 ygcU Uncharacterized FAD-linked oxidoreductase YgcU low > 87
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17940 gamma-glutamyl kinase 0.32 RR42_RS06435 2-hydroxyacid dehydrogenase low > 128
Escherichia coli ECRC98 0.36 JDDGAC_13300 proB Glutamate 5-kinase 0.10 JDDGAC_23985 ygcU Uncharacterized FAD-linked oxidoreductase YgcU low > 86
Escherichia coli ECRC100 0.36 OKFHMN_09675 proB Glutamate 5-kinase 0.10 OKFHMN_20320 ygcU Uncharacterized FAD-linked oxidoreductase YgcU low > 80
Castellaniella sp019104865 MT123 0.36 ABCV34_RS10800 glutamate 5-kinase 0.31 ABCV34_RS09275 FAD-binding oxidoreductase — —
Escherichia coli ECRC102 0.36 NIAGMN_07535 proB Glutamate 5-kinase 0.10 NIAGMN_18090 ygcU Uncharacterized FAD-linked oxidoreductase YgcU — —
Magnetospirillum magneticum AMB-1 0.35 AMB_RS20630 glutamate 5-kinase 0.27 AMB_RS18795 FAD-binding oxidoreductase — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.54 Pf1N1B4_2274 D-2-hydroxyglutarate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS25360 glutamate 5-kinase 0.53 PFLU_RS28690 FAD-binding oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS25360 glutamate 5-kinase 0.53 PFLU_RS28690 FAD-binding oxidoreductase low > 109
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS27270 glutamate 5-kinase 0.32 QEN71_RS05170 FAD-binding oxidoreductase low > 153
Pseudomonas simiae WCS417 0.34 PS417_23545 gamma-glutamyl kinase 0.53 PS417_27035 FAD-linked oxidase 0.44 57
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS17110 glutamate 5-kinase 0.31 BPHYT_RS13750 D-2-hydroxyacid dehydrogenase — —
Paraburkholderia graminis OAS925 0.34 ABIE53_003588 glutamate 5-kinase 0.30 ABIE53_002925 FAD/FMN-containing dehydrogenase low > 113
Azospirillum brasilense Sp245 0.34 AZOBR_RS04095 glutamate 5-kinase 0.32 AZOBR_RS05770 2-hydroxyacid dehydrogenase — —
Variovorax sp. OAS795 0.34 ABID97_RS23400 glutamate 5-kinase 0.32 ABID97_RS10060 FAD-binding oxidoreductase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_06264 glutamate 5-kinase 0.32 H281DRAFT_02585 FAD/FMN-containing dehydrogenase low > 103
Pseudomonas putida KT2440 0.34 PP_0691 Glutamate 5-kinase 0.54 PP_5154 putative Oxidoreductase, FAD-binding low > 96
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.29 Ac3H11_2934 D-2-hydroxyglutarate dehydrogenase low > 79
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS01815 gamma-glutamyl kinase 0.33 HSERO_RS16560 2-hydroxyacid dehydrogenase low > 78
Pseudomonas sp. RS175 0.33 PFR28_03769 Glutamate 5-kinase 0.53 PFR28_04841 putative FAD-linked oxidoreductase — —
Dechlorosoma suillum PS 0.33 Dsui_0166 glutamate 5-kinase 0.29 Dsui_2542 FAD/FMN-dependent dehydrogenase — —
Pseudomonas sp. S08-1 0.33 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.53 OH686_11285 D-2-hydroxyglutarate dehydrogenase low > 80
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.53 Pf6N2E2_3933 D-2-hydroxyglutarate dehydrogenase low > 103
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_15815 gamma-glutamyl kinase 0.53 AO356_10305 FAD-linked oxidase low > 104
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.53 PfGW456L13_944 D-2-hydroxyglutarate dehydrogenase low > 87
Azospirillum sp. SherDot2 0.33 MPMX19_01933 Glutamate 5-kinase 0.31 MPMX19_01997 putative FAD-linked oxidoreductase — —
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_0704 glutamate 5-kinase 0.52 Psyr_4851 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_0704 glutamate 5-kinase 0.52 Psyr_4851 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal low > 86
Sinorhizobium meliloti 1021 0.33 SMc03776 gamma-glutamyl kinase 0.29 SMc00985 oxidoreductase — —
Rhizobium sp. OAE497 0.33 ABIE40_RS18920 glutamate 5-kinase 0.30 ABIE40_RS03825 FAD-binding oxidoreductase — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_14115 gamma-glutamyl kinase 0.53 AO353_08505 FAD-linked oxidase low > 101
Variovorax sp. SCN45 0.32 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.31 GFF742 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) — —
Pseudomonas stutzeri RCH2 0.32 Psest_3384 glutamate 5-kinase 0.53 Psest_3872 FAD/FMN-containing dehydrogenases low > 67
Agrobacterium fabrum C58 0.32 Atu2780 gamma-glutamyl kinase 0.28 Atu0723 FAD dependent oxidoreductase — —
Rhodospirillum rubrum S1H 0.30 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.28 Rru_A0442 FAD linked oxidase-like (NCBI) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.33 GFF5251 D-2-hydroxyglutarate dehydrogenase low > 90
Dinoroseobacter shibae DFL-12 0.30 Dshi_1467 glutamate 5-kinase (RefSeq) 0.25 Dshi_2076 FAD linked oxidase domain protein (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.30 TX73_000850 glutamate 5-kinase 0.32 TX73_010320 FAD-binding oxidoreductase — —
Bosea sp. OAE506 0.30 ABIE41_RS07585 glutamate 5-kinase 0.28 ABIE41_RS22250 FAD-binding oxidoreductase — —
Acinetobacter radioresistens SK82 0.30 MPMX26_02135 Glutamate 5-kinase 0.54 MPMX26_02772 putative FAD-linked oxidoreductase low > 36
Phaeobacter inhibens DSM 17395 0.29 PGA1_c15510 glutamate 5-kinase ProB 0.25 PGA1_c06340 putative FAD linked oxidase — —
Marinobacter adhaerens HP15 0.29 HP15_508 gamma-glutamyl kinase 0.55 HP15_2553 oxidoreductase, FAD-binding protein — —
Caulobacter crescentus NA1000 0.29 CCNA_00316 glutamate 5-kinase 0.27 CCNA_03500 FAD/FMN-containing dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_00316 glutamate 5-kinase 0.27 CCNA_03500 FAD/FMN-containing dehydrogenase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS16125 glutamate 5-kinase 0.26 A4249_RS05570 FAD-binding oxidoreductase — —
Mycobacterium tuberculosis H37Rv 0.24 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) 0.23 Rv0161 Possible oxidoreductase — —
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.26 Ga0059261_1572 FAD/FMN-containing dehydrogenases — —

Not shown: 40 genomes with orthologs for Xcc-8004.2326.1 only; 1 genomes with orthologs for Xcc-8004.2929.1 only