Conservation of cofitness between Xcc-8004.3041.1 and Xcc-8004.2923.1 in Xanthomonas campestris pv. campestris strain 8004

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3041.1 Dna binding response regulator PrrA (RegA) 1.0 Xcc-8004.2923.1 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.68 12
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_10900 two-component system response regulator 0.75 OKGIIK_09340 hydroxymethylglutaryl-CoA lyase — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS10115 response regulator transcription factor 0.75 ABZR86_RS20630 hydroxymethylglutaryl-CoA lyase — —
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS00325 response regulator transcription factor 0.56 QEN71_RS01060 hydroxymethylglutaryl-CoA lyase — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS03810 response regulator transcription factor 0.70 LRK55_RS02040 hydroxymethylglutaryl-CoA lyase low > 63
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS04040 response regulator transcription factor 0.70 LRK54_RS02285 hydroxymethylglutaryl-CoA lyase — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02208 two component transcriptional regulator, Fis family 0.56 H281DRAFT_02101 hydroxymethylglutaryl-CoA lyase — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS01625 chemotaxis protein CheY 0.56 BPHYT_RS02130 hydroxymethylglutaryl-CoA lyase 0.25 90
Paraburkholderia graminis OAS925 0.45 ABIE53_000420 two-component system response regulator RegA 0.56 ABIE53_000573 hydroxymethylglutaryl-CoA lyase — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS13000 chemotaxis protein CheY 0.54 HSERO_RS23475 hydroxymethylglutaryl-CoA lyase 0.49 13
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_5048 Dna binding response regulator PrrA (RegA) 0.61 PfGW456L13_2594 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) low > 87
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4230 Helix-turn-helix, Fis-type 0.57 Psyr_2471 hydroxymethylglutaryl-CoA lyase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4230 Helix-turn-helix, Fis-type 0.57 Psyr_2471 hydroxymethylglutaryl-CoA lyase low > 86
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_05335 chemotaxis protein CheY 0.60 AO353_20365 hydroxymethylglutaryl-CoA lyase — —
Ralstonia solanacearum UW163 0.42 UW163_RS03965 DNA-binding response regulator 0.55 UW163_RS03145 hydroxymethylglutaryl-CoA lyase — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS09615 DNA-binding response regulator 0.55 RALBFv3_RS10435 hydroxymethylglutaryl-CoA lyase low > 76
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS05135 response regulator transcription factor 0.57 ABZR87_RS06250 hydroxymethylglutaryl-CoA lyase — —
Dechlorosoma suillum PS 0.41 Dsui_1180 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein 0.59 Dsui_0984 isopropylmalate/homocitrate/citramalate synthase low > 51
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1115 Dna binding response regulator PrrA (RegA) 0.61 Pf1N1B4_3990 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) low > 87
Pseudomonas putida KT2440 0.41 PP_0888 Photosynthetic apparatus regulatory protein RegA 0.60 PP_3540 Hydroxymethylglutaryl-CoA lyase — —
Ralstonia solanacearum GMI1000 0.41 RS_RS00200 DNA-binding response regulator 0.54 RS_RS01280 hydroxymethylglutaryl-CoA lyase 0.55 11
Shewanella oneidensis MR-1 0.41 SO4172 DNA-binding response regulator (NCBI ptt file) 0.60 SO1893 mvaB hydroxymethylglutaryl-CoA lyase (NCBI ptt file) — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS04140 response regulator transcription factor 0.61 PFLU_RS18955 hydroxymethylglutaryl-CoA lyase low > 109
Pseudomonas sp. S08-1 0.41 OH686_08680 Dna binding response regulator PrrA (RegA) 0.59 OH686_00835 Hydroxymethylglutaryl-CoA lyase — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_07205 chemotaxis protein CheY 0.60 AO356_01570 hydroxymethylglutaryl-CoA lyase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS23750 DNA-binding response regulator 0.55 RPSI07_RS22880 hydroxymethylglutaryl-CoA lyase low > 81
Shewanella sp. ANA-3 0.41 Shewana3_3707 response regulator receiver protein (RefSeq) 0.60 Shewana3_1668 hydroxymethylglutaryl-CoA lyase (RefSeq) — —
Pseudomonas sp. RS175 0.41 PFR28_00137 Photosynthetic apparatus regulatory protein RegA 0.61 PFR28_01262 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase — —
Pseudomonas simiae WCS417 0.41 PS417_04100 chemotaxis protein CheY 0.61 PS417_17005 hydroxymethylglutaryl-CoA lyase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS04140 response regulator transcription factor 0.61 PFLU_RS18955 hydroxymethylglutaryl-CoA lyase low > 109
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3302 Dna binding response regulator PrrA (RegA) 0.60 Pf6N2E2_2189 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) — —
Pseudomonas stutzeri RCH2 0.41 Psest_3338 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.59 Psest_1079 Isopropylmalate/homocitrate/citramalate synthases low > 67
Shewanella loihica PV-4 0.41 Shew_3342 two component Fis family transcriptional regulator (RefSeq) 0.62 Shew_2574 pyruvate carboxyltransferase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1932 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.59 B158DRAFT_2506 Isopropylmalate/homocitrate/citramalate synthases — —
Shewanella amazonensis SB2B 0.39 Sama_3186 response regulator receiver protein (RefSeq) 0.62 Sama_1358 pyruvate carboxyltransferase (RefSeq) low > 62
Dinoroseobacter shibae DFL-12 0.38 Dshi_3430 two component transcriptional regulator, Fis family (RefSeq) 0.48 Dshi_1303 Hydroxymethylglutaryl-CoA lyase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c35390 photosynthetic apparatus regulatory protein RegA 0.47 PGA1_c10340 hydroxymethylglutaryl-CoA lyase MvaB — —
Caulobacter crescentus NA1000 0.37 CCNA_01845 two-component response regulator protein 0.36 CCNA_00500 hydroxymethylglutaryl-CoA lyase — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01845 two-component response regulator protein 0.36 CCNA_00500 hydroxymethylglutaryl-CoA lyase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS04475 response regulator transcription factor 0.36 A4249_RS14615 hydroxymethylglutaryl-CoA lyase — —
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS01085 chemotaxis protein CheY 0.55 RR42_RS00955 hydroxymethylglutaryl-CoA lyase low > 128
Rhizobium sp. OAE497 0.36 ABIE40_RS19505 ActR/PrrA/RegA family redox response regulator transcription factor 0.47 ABIE40_RS20770 hydroxymethylglutaryl-CoA lyase low > 107
Azospirillum sp. SherDot2 0.36 MPMX19_06181 Photosynthetic apparatus regulatory protein RegA 0.60 MPMX19_03941 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS23150 chemotaxis protein CheY 0.60 AZOBR_RS22280 hydroxymethylglutaryl-CoA lyase low > 97
Sinorhizobium meliloti 1021 0.36 SMc02584 transcriptional regulator 0.48 SM_b21125 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (from data) — —
Agrobacterium fabrum C58 0.35 Atu0050 two component response regulator 0.55 Atu3480 hydroxymethylglutaryl-CoA lyase low > 89
Lysobacter sp. OAE881 0.35 ABIE51_RS09795 response regulator transcription factor 0.77 ABIE51_RS13205 hydroxymethylglutaryl-CoA lyase — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3147 Dna binding response regulator PrrA (RegA) 0.50 Ac3H11_3018 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) — —
Marinobacter adhaerens HP15 0.34 HP15_3981 two component transcriptional regulator, Fis family 0.63 HP15_1001 pyruvate carboxyltransferase — —
Variovorax sp. SCN45 0.34 GFF5672 Dna binding response regulator PrrA (RegA) 0.51 GFF2023 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) low > 127
Rhodopseudomonas palustris CGA009 0.34 TX73_002960 ActR/PrrA/RegA family redox response regulator transcription factor 0.59 TX73_013125 hydroxymethylglutaryl-CoA lyase low > 86
Variovorax sp. OAS795 0.34 ABID97_RS07610 response regulator transcription factor 0.51 ABID97_RS25100 hydroxymethylglutaryl-CoA lyase low > 91

Not shown: 2 genomes with orthologs for Xcc-8004.3041.1 only; 10 genomes with orthologs for Xcc-8004.2923.1 only