Conservation of cofitness between Xcc-8004.4073.1 and Xcc-8004.2323.1 in Xanthomonas campestris pv. campestris strain 8004

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) 1.0 Xcc-8004.2323.1 Argininosuccinate lyase (EC 4.3.2.1) 0.78 13
Lysobacter sp. OAE881 0.82 ABIE51_RS06180 amidophosphoribosyltransferase 0.69 ABIE51_RS13380 argininosuccinate lyase low > 62
Dyella japonica UNC79MFTsu3.2 0.73 ABZR86_RS06775 amidophosphoribosyltransferase 0.67 ABZR86_RS08695 arginosuccinate lyase (EC 4.3.2.1) (from data) 0.95 30
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_05570 purF amidophosphoribosyltransferase 0.70 OKGIIK_09430 argH argininosuccinate lyase low > 52
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS01340 amidophosphoribosyltransferase 0.70 LRK54_RS02380 argininosuccinate lyase 0.59 43
Rhodanobacter denitrificans MT42 0.71 LRK55_RS01105 amidophosphoribosyltransferase 0.70 LRK55_RS02135 argininosuccinate lyase low > 63
Pseudomonas sp. S08-1 0.65 OH686_04420 amidophosphoribosyltransferase 0.22 OH686_13885 argininosuccinate lyase — —
Pseudomonas putida KT2440 0.64 PP_2000 amidophosphoribosyl transferase 0.23 PP_0184 Argininosuccinate lyase 0.31 37
Pseudomonas sp. RS175 0.64 PFR28_02811 Amidophosphoribosyltransferase 0.22 PFR28_04367 Argininosuccinate lyase — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.23 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas simiae WCS417 0.64 PS417_18535 amidophosphoribosyltransferase 0.22 PS417_27540 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS20515 amidophosphoribosyltransferase 0.22 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS20515 amidophosphoribosyltransferase 0.22 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas stutzeri RCH2 0.64 Psest_2579 amidophosphoribosyltransferase 0.22 Psest_3751 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_20690 amidophosphoribosyltransferase 0.22 AO353_09000 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_21465 amidophosphoribosyltransferase 0.22 AO356_12780 argininosuccinate lyase 0.79 22
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.22 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1) — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) 0.52 B158DRAFT_1980 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1668 amidophosphoribosyltransferase 0.22 Psyr_0065 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1668 amidophosphoribosyltransferase 0.22 Psyr_0065 argininosuccinate lyase — —
Shewanella loihica PV-4 0.62 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.21 Shew_0206 argininosuccinate lyase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_05115 amidophosphoribosyltransferase 0.19 CSW01_13360 argininosuccinate lyase low > 62
Shewanella amazonensis SB2B 0.61 Sama_2146 amidophosphoribosyltransferase (RefSeq) 0.20 Sama_0260 argininosuccinate lyase (RefSeq) 0.77 44
Erwinia tracheiphila SCR3 0.61 LU632_RS07865 purF amidophosphoribosyltransferase 0.21 LU632_RS19600 argH argininosuccinate lyase 0.62 56
Shewanella sp. ANA-3 0.61 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.20 Shewana3_3901 argininosuccinate lyase (RefSeq) 0.82 64
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.22 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) low > 78
Serratia liquefaciens MT49 0.61 IAI46_17810 amidophosphoribosyltransferase 0.22 IAI46_24500 argininosuccinate lyase low > 86
Pantoea sp. MT58 0.61 IAI47_06275 amidophosphoribosyltransferase 0.21 IAI47_00920 argininosuccinate lyase 0.79 26
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01393 Amidophosphoribosyltransferase 0.22 OHPLBJKB_04090 Argininosuccinate lyase low > 73
Escherichia coli ECRC62 0.61 BNILDI_13255 purF amidophosphoribosyltransferase 0.22 BNILDI_05805 argH argininosuccinate lyase low > 75
Escherichia coli ECOR38 0.61 HEPCGN_21910 purF amidophosphoribosyltransferase 0.22 HEPCGN_12220 argH argininosuccinate lyase 0.70 86
Escherichia coli Nissle 1917 0.61 ECOLIN_RS13405 amidophosphoribosyltransferase 0.22 ECOLIN_RS22855 argininosuccinate lyase — —
Escherichia coli ECRC100 0.61 OKFHMN_22715 purF amidophosphoribosyltransferase 0.22 OKFHMN_13575 argH argininosuccinate lyase low > 80
Escherichia fergusonii Becca 0.61 EFB2_01546 Amidophosphoribosyltransferase 0.22 EFB2_04654 Argininosuccinate lyase low > 86
Escherichia coli ECRC101 0.61 MCAODC_13755 purF amidophosphoribosyltransferase 0.22 MCAODC_04075 argH argininosuccinate lyase low > 87
Escherichia coli ECRC99 0.61 KEDOAH_05480 purF amidophosphoribosyltransferase 0.22 KEDOAH_14585 argH argininosuccinate lyase — —
Escherichia coli ECRC98 0.61 JDDGAC_26675 purF amidophosphoribosyltransferase 0.22 JDDGAC_17200 argH argininosuccinate lyase low > 86
Escherichia coli ECRC102 0.61 NIAGMN_20485 purF amidophosphoribosyltransferase 0.22 NIAGMN_11325 argH argininosuccinate lyase — —
Escherichia coli ECOR27 0.60 NOLOHH_14335 purF amidophosphoribosyltransferase 0.22 NOLOHH_05720 argH argininosuccinate lyase low > 75
Escherichia coli BL21 0.60 ECD_02237 amidophosphoribosyltransferase 0.22 ECD_03845 argininosuccinate lyase low > 61
Escherichia coli BW25113 0.60 b2312 purF amidophosphoribosyltransferase (NCBI) 0.22 b3960 argH argininosuccinate lyase (NCBI) 0.80 29
Klebsiella michiganensis M5al 0.60 BWI76_RS20350 amidophosphoribosyltransferase 0.22 BWI76_RS00855 argininosuccinate lyase 0.83 19
Enterobacter sp. TBS_079 0.60 MPMX20_03247 Amidophosphoribosyltransferase 0.22 MPMX20_04520 Argininosuccinate lyase 0.88 9
Shewanella oneidensis MR-1 0.60 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.19 SO0279 argH argininosuccinate lyase (NCBI ptt file) 0.82 66
Rahnella sp. WP5 0.60 EX31_RS19570 amidophosphoribosyltransferase 0.21 EX31_RS14180 argininosuccinate lyase 0.92 25
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) 0.21 EX28DRAFT_4422 argininosuccinate lyase low > 76
Pectobacterium carotovorum WPP14 0.60 HER17_RS07020 amidophosphoribosyltransferase 0.20 HER17_RS20620 argininosuccinate lyase 0.82 75
Acinetobacter radioresistens SK82 0.60 MPMX26_01122 Amidophosphoribosyltransferase 0.23 MPMX26_00185 Argininosuccinate lyase 0.87 15
Dickeya dadantii 3937 0.60 DDA3937_RS14435 amidophosphoribosyltransferase 0.20 DDA3937_RS20340 argininosuccinate lyase low > 74
Dickeya dianthicola ME23 0.60 DZA65_RS15335 amidophosphoribosyltransferase 0.19 DZA65_RS00945 argininosuccinate lyase 0.79 12
Dickeya dianthicola 67-19 0.60 HGI48_RS14405 amidophosphoribosyltransferase 0.19 HGI48_RS00885 argininosuccinate lyase 0.72 19
Alteromonas macleodii MIT1002 0.59 MIT1002_02524 Amidophosphoribosyltransferase 0.20 MIT1002_00467 Argininosuccinate lyase 0.94 38
Dechlorosoma suillum PS 0.58 Dsui_3186 amidophosphoribosyltransferase 0.22 Dsui_0111 argininosuccinate lyase — —
Paraburkholderia graminis OAS925 0.58 ABIE53_004816 amidophosphoribosyltransferase 0.22 ABIE53_001311 argininosuccinate lyase — —
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_06060 amidophosphoribosyltransferase 0.22 H281DRAFT_00194 argininosuccinate lyase 0.45 26
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.20 GFF736 Argininosuccinate lyase (EC 4.3.2.1) — —
Variovorax sp. SCN45 0.52 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.22 GFF3824 Argininosuccinate lyase (EC 4.3.2.1) — —
Variovorax sp. OAS795 0.52 ABID97_RS21635 amidophosphoribosyltransferase 0.21 ABID97_RS08190 argininosuccinate lyase — —
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU0161 purF amidophosphoribosyltransferase (TIGR) 0.22 DVU1094 argH argininosuccinate lyase (TIGR) — —
Bosea sp. OAE506 0.30 ABIE41_RS17810 amidophosphoribosyltransferase 0.20 ABIE41_RS08750 argininosuccinate lyase — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_2307 amidophosphoribosyltransferase (RefSeq) 0.23 DvMF_0048 argininosuccinate lyase (RefSeq) 0.77 28
Dinoroseobacter shibae DFL-12 0.29 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.20 Dshi_3062 argininosuccinate lyase (RefSeq) 0.80 18
Rhodopseudomonas palustris CGA009 0.29 TX73_015990 amidophosphoribosyltransferase 0.22 TX73_024645 argininosuccinate lyase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c10810 amidophosphoribosyltransferase PurF 0.22 PGA1_c03450 argininosuccinate lyase ArgH — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS03735 amidophosphoribosyltransferase 0.21 A4249_RS12555 argininosuccinate lyase — —
Rhizobium sp. OAE497 0.28 ABIE40_RS06270 amidophosphoribosyltransferase 0.22 ABIE40_RS17520 argininosuccinate lyase — —
Sinorhizobium meliloti 1021 0.27 SMc00554 amidophosphoribosyltransferase 0.23 SMc00725 argininosuccinate lyase low > 103
Bacteroides ovatus ATCC 8483 0.12 BACOVA_05376 putative amidophosphoribosyltransferase 0.31 BACOVA_03551 argininosuccinate lyase low > 94
Parabacteroides merdae CL09T00C40 0.12 HMPREF1078_RS10430 amidophosphoribosyltransferase 0.32 HMPREF1078_RS11315 argininosuccinate lyase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.11 BT4582 amidophosphoribosyltransferase precursor (NCBI ptt file) 0.29 BT3733 arginosuccinate lyase (EC 4.3.2.1) (from data) low > 81
Phocaeicola vulgatus CL09T03C04 0.11 HMPREF1058_RS04675 amidophosphoribosyltransferase 0.31 HMPREF1058_RS09585 argininosuccinate lyase low > 67
Phocaeicola dorei CL03T12C01 0.11 ABI39_RS18960 amidophosphoribosyltransferase 0.31 ABI39_RS07095 argininosuccinate lyase low > 72
Echinicola vietnamensis KMM 6221, DSM 17526 0.11 Echvi_4653 Glutamine phosphoribosylpyrophosphate amidotransferase 0.30 Echvi_3852 arginosuccinate lyase (EC 4.3.2.1) (from data) — —

Not shown: 26 genomes with orthologs for Xcc-8004.4073.1 only; 5 genomes with orthologs for Xcc-8004.2323.1 only