Conservation of cofitness between TX73_012725 and TX73_003430 in Rhodopseudomonas palustris CGA009

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_012725 anhydro-N-acetylmuramic acid kinase 1.0 TX73_003430 YfhL family 4Fe-4S dicluster ferredoxin 0.55 19
Magnetospirillum magneticum AMB-1 0.41 AMB_RS15285 anhydro-N-acetylmuramic acid kinase 0.61 AMB_RS10800 ferredoxin low > 64
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_4838 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.52 Pf6N2E2_4571 4Fe-4S ferredoxin, iron-sulfur binding
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_03615 anhydro-N-acetylmuramic acid kinase 0.50 CSW01_03745 ferredoxin low > 62
Dickeya dadantii 3937 0.27 DDA3937_RS12585 anhydro-N-acetylmuramic acid kinase 0.51 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin low > 74
Pseudomonas fluorescens SBW25 0.27 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.52 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase 0.52 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin
Dickeya dianthicola 67-19 0.27 HGI48_RS12640 anhydro-N-acetylmuramic acid kinase 0.52 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin low > 71
Dickeya dianthicola ME23 0.27 DZA65_RS13095 anhydro-N-acetylmuramic acid kinase 0.51 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin low > 75
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_2562 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.52 Pf1N1B4_2311 4Fe-4S ferredoxin, iron-sulfur binding
Pseudomonas putida KT2440 0.27 PP_0434 Anhydro-N-acetylmuramic acid kinase 0.52 PP_5124 putative 4Fe-4S cluster-containing protein
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_14500 anhydro-N-acetylmuramic acid kinase 0.52 AO356_13280 ferredoxin
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1235 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.52 PfGW456L13_980 4Fe-4S ferredoxin, iron-sulfur binding
Pseudomonas sp. RS175 0.26 PFR28_04031 Anhydro-N-acetylmuramic acid kinase 0.52 PFR28_04270 Ferredoxin
Paraburkholderia graminis OAS925 0.26 ABIE53_003499 anhydro-N-acetylmuramic acid kinase 0.54 ABIE53_000703 ferredoxin 0.28 47
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_07145 anhydro-N-acetylmuramic acid kinase 0.52 AO353_08310 ferredoxin
Pseudomonas sp. S08-1 0.26 OH686_15205 Anhydro-N-acetylmuramic acid kinase 0.53 OH686_14145 Uncharacterized ferredoxin-like protein YfhL low > 80
Pseudomonas simiae WCS417 0.26 PS417_25650 anhydro-N-acetylmuramic acid kinase 0.52 PS417_26865 ferredoxin
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_04259 anhydro-N-acetylmuramic acid kinase 0.54 H281DRAFT_01943 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) low > 103
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS02010 anhydro-N-acetylmuramic acid kinase 0.59 HSERO_RS20685 ferredoxin
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_4567 Protein of unknown function UPF0075 0.54 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_4567 Protein of unknown function UPF0075 0.54 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein
Pantoea sp. MT58 0.26 IAI47_10710 anhydro-N-acetylmuramic acid kinase 0.49 IAI47_04905 YfhL family 4Fe-4S dicluster ferredoxin low > 76
Pseudomonas stutzeri RCH2 0.26 Psest_3637 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 0.49 Psest_0243 hypothetical protein low > 67
Rahnella sp. WP5 0.26 EX31_RS13765 anhydro-N-acetylmuramic acid kinase 0.55 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin low > 89
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS16645 anhydro-N-acetylmuramic acid kinase 0.54 BPHYT_RS02825 ferredoxin low > 109
Pectobacterium carotovorum WPP14 0.25 HER17_RS09280 anhydro-N-acetylmuramic acid kinase 0.50 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin low > 75
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_15705 anhydro-N-acetylmuramic acid kinase 0.57 OKGIIK_02595 nuoI Ferredoxin low > 52
Shewanella amazonensis SB2B 0.25 Sama_0848 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.49 Sama_1002 ferredoxin, 4Fe-4S (RefSeq) low > 62
Escherichia coli ECRC62 0.25 BNILDI_16795 anmK anhydro-N-acetylmuramic acid kinase 0.50 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 75
Escherichia coli ECOR38 0.25 HEPCGN_05870 anmK anhydro-N-acetylmuramic acid kinase 0.50 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 87
Rhodanobacter denitrificans MT42 0.25 LRK55_RS08740 anhydro-N-acetylmuramic acid kinase 0.55 LRK55_RS13095 YfhL family 4Fe-4S dicluster ferredoxin low > 63
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS09210 anhydro-N-acetylmuramic acid kinase 0.56 LRK54_RS13355 YfhL family 4Fe-4S dicluster ferredoxin low > 59
Enterobacter asburiae PDN3 0.25 EX28DRAFT_1636 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 0.50 EX28DRAFT_0084 4Fe-4S dicluster domain low > 76
Escherichia coli ECRC101 0.25 MCAODC_17925 anmK anhydro-N-acetylmuramic acid kinase 0.50 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 87
Escherichia coli ECRC99 0.25 KEDOAH_00620 anmK anhydro-N-acetylmuramic acid kinase 0.50 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL
Escherichia coli ECRC102 0.25 NIAGMN_00580 anmK anhydro-N-acetylmuramic acid kinase 0.50 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL
Shewanella sp. ANA-3 0.25 Shewana3_3060 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.50 Shewana3_1067 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq)
Serratia liquefaciens MT49 0.25 IAI46_11350 anhydro-N-acetylmuramic acid kinase 0.56 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin low > 86
Escherichia coli ECRC100 0.25 OKFHMN_27485 anmK anhydro-N-acetylmuramic acid kinase 0.50 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 80
Acidovorax sp. GW101-3H11 0.25 Ac3H11_3055 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.51 Ac3H11_4828 Ferredoxin low > 79
Escherichia coli ECRC98 0.25 JDDGAC_02075 anmK anhydro-N-acetylmuramic acid kinase 0.50 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 86
Escherichia coli BW25113 0.25 b1640 ydhH anhydro-N-acetylmuramic acid kinase (NCBI) 0.50 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF3634 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.49 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_02085 Anhydro-N-acetylmuramic acid kinase 0.50 OHPLBJKB_01145 Ferredoxin YfhL low > 73
Escherichia coli BL21 0.25 ECD_01610 anhydro-N-acetylmuramic acid kinase 0.50 ECD_02456 putative 4Fe-4S cluster-containing protein low > 61
Escherichia coli ECOR27 0.25 NOLOHH_18005 anmK anhydro-N-acetylmuramic acid kinase 0.50 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL low > 75
Escherichia fergusonii Becca 0.25 EFB2_02352 Anhydro-N-acetylmuramic acid kinase 0.49 EFB2_01334 Ferredoxin YfhL low > 86
Enterobacter sp. TBS_079 0.25 MPMX20_01998 Anhydro-N-acetylmuramic acid kinase 0.50 MPMX20_03433 Ferredoxin YfhL low > 85
Escherichia coli Nissle 1917 0.25 ECOLIN_RS09150 anhydro-N-acetylmuramic acid kinase 0.49 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL
Klebsiella michiganensis M5al 0.24 BWI76_RS16420 anhydro-N-acetylmuramic acid kinase 0.51 BWI76_RS21295 ferredoxin
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.4878.1 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 0.55 Xcc-8004.2157.1 4Fe-4S ferredoxin, iron-sulfur binding
Shewanella oneidensis MR-1 0.24 SO1313 conserved hypothetical protein (NCBI ptt file) 0.50 SO1251 ferredoxin, 4Fe-4S (NCBI ptt file)
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS15665 anhydro-N-acetylmuramic acid kinase 0.54 ABZR86_RS20005 YfhL family 4Fe-4S dicluster ferredoxin low > 74
Shewanella loihica PV-4 0.24 Shew_1020 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) 0.49 Shew_2785 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) low > 60
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS26820 anhydro-N-acetylmuramic acid kinase 0.56 QEN71_RS01675 YfhL family 4Fe-4S dicluster ferredoxin low > 153
Ralstonia solanacearum GMI1000 0.24 RS_RS02460 anhydro-N-acetylmuramic acid kinase 0.55 RS_RS01930 4Fe-4S dicluster domain-containing protein
Erwinia tracheiphila SCR3 0.23 LU632_RS11250 anmK anhydro-N-acetylmuramic acid kinase 0.50 LU632_RS15360 YfhL family 4Fe-4S dicluster ferredoxin
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0004 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 0.53 B158DRAFT_0772 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Acinetobacter radioresistens SK82 0.23 MPMX26_00013 Anhydro-N-acetylmuramic acid kinase 0.52 MPMX26_00739 Ferredoxin low > 36
Ralstonia solanacearum UW163 0.23 UW163_RS01950 anhydro-N-acetylmuramic acid kinase 0.54 UW163_RS02500 4Fe-4S dicluster domain-containing protein
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS11635 anhydro-N-acetylmuramic acid kinase 0.54 RALBFv3_RS11080 4Fe-4S dicluster domain-containing protein
Ralstonia solanacearum PSI07 0.23 RPSI07_RS21585 anhydro-N-acetylmuramic acid kinase 0.57 RPSI07_RS22220 4Fe-4S dicluster domain-containing protein
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS02660 anhydro-N-acetylmuramic acid kinase 0.53 RR42_RS02000 ferredoxin
Variovorax sp. SCN45 0.22 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) 0.48 GFF2345 Uncharacterized ferredoxin-like protein YfhL low > 127
Alteromonas macleodii MIT1002 0.22 MIT1002_03153 Anhydro-N-acetylmuramic acid kinase 0.51 MIT1002_02343 putative ferredoxin-like protein low > 70
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS07595 anhydro-N-acetylmuramic acid kinase 0.56 ABZR87_RS06970 YfhL family 4Fe-4S dicluster ferredoxin low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_03445 anhydro-N-acetylmuramic acid kinase 0.43 CA264_00950 ferredoxin
Lysobacter sp. OAE881 0.20 ABIE51_RS00040 anhydro-N-acetylmuramic acid kinase 0.56 ABIE51_RS15110 YfhL family 4Fe-4S dicluster ferredoxin
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS18185 anhydro-N-acetylmuramic acid kinase 0.40 ABZR88_RS06810 4Fe-4S dicluster domain-containing protein
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS21930 anhydro-N-acetylmuramic acid kinase 0.41 CA265_RS03585 ferredoxin
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_0859 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 0.41 Echvi_2528 hypothetical protein

Not shown: 15 genomes with orthologs for TX73_012725 only; 1 genomes with orthologs for TX73_003430 only