Conservation of cofitness between RR42_RS34650 and RR42_RS06485 in Cupriavidus basilensis FW507-4G11

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS34650 LacI family transcriptional regulator 1.0 RR42_RS06485 chorismate synthase 0.42 16
Variovorax sp. OAS795 0.44 ABID97_RS03270 LacI family DNA-binding transcriptional regulator 0.70 ABID97_RS19805 chorismate synthase — —
Variovorax sp. SCN45 0.44 GFF3450 Transcriptional regulator, LacI family 0.69 GFF2627 Chorismate synthase (EC 4.2.3.5) low > 127
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_3073 Transcriptional regulators 0.47 Echvi_1518 chorismate synthase — —
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS01690 LacI family DNA-binding transcriptional regulator 0.67 ABZR86_RS08040 chorismate synthase low > 74
Sinorhizobium meliloti 1021 0.24 SM_b20014 transcriptional regulator 0.49 SMc00007 chorismate synthase — —
Enterobacter sp. TBS_079 0.24 MPMX20_00737 Maltose regulon regulatory protein MalI 0.59 MPMX20_03264 Chorismate synthase low > 85
Bosea sp. OAE506 0.24 ABIE41_RS06440 LacI family DNA-binding transcriptional regulator 0.52 ABIE41_RS10190 chorismate synthase — —
Pectobacterium carotovorum WPP14 0.23 HER17_RS21525 ribose operon transcriptional repressor RbsR 0.62 HER17_RS06935 chorismate synthase low > 75
Serratia liquefaciens MT49 0.23 IAI46_25050 ribose operon transcriptional repressor RbsR 0.61 IAI46_18025 chorismate synthase low > 86
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_14670 transcriptional repressor PurR 0.63 CSW01_10560 chorismate synthase low > 62
Klebsiella michiganensis M5al 0.23 BWI76_RS00765 DNA-binding transcriptional regulator CytR 0.59 BWI76_RS20435 chorismate synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF2316 Transcriptional (co)regulator CytR 0.61 GFF1950 Chorismate synthase (EC 4.2.3.5) low > 78
Escherichia coli ECRC102 0.23 NIAGMN_11480 cytR DNA-binding transcriptional regulator CytR 0.61 NIAGMN_20390 aroC chorismate synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_04117 HTH-type transcriptional repressor CytR 0.61 OHPLBJKB_01376 Chorismate synthase low > 73
Escherichia coli BW25113 0.23 b3934 cytR DNA-binding transcriptional dual regulator (NCBI) 0.61 b2329 aroC chorismate synthase (NCBI) low > 76
Escherichia coli ECRC101 0.23 MCAODC_04225 cytR DNA-binding transcriptional regulator CytR 0.61 MCAODC_13655 aroC chorismate synthase low > 87
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS09955 LacI family DNA-binding transcriptional regulator 0.86 ABZR87_RS13790 chorismate synthase 0.33 73
Escherichia coli Nissle 1917 0.23 ECOLIN_RS22650 DNA-binding transcriptional regulator CytR 0.61 ECOLIN_RS13490 chorismate synthase — —
Dickeya dadantii 3937 0.23 DDA3937_RS00055 ribose operon transcriptional repressor RbsR 0.60 DDA3937_RS14580 chorismate synthase — —
Escherichia coli ECOR38 0.23 HEPCGN_12370 cytR DNA-binding transcriptional regulator CytR 0.61 HEPCGN_21820 aroC chorismate synthase low > 87
Escherichia coli ECOR27 0.23 NOLOHH_05870 cytR DNA-binding transcriptional regulator CytR 0.61 NOLOHH_14250 aroC chorismate synthase low > 75
Escherichia coli BL21 0.23 ECD_03819 Anti-activator for CytR-CRP nucleoside utilization regulon 0.61 ECD_02254 chorismate synthase low > 61
Escherichia coli ECRC62 0.23 BNILDI_05660 cytR DNA-binding transcriptional regulator CytR 0.61 BNILDI_13170 aroC chorismate synthase low > 75
Escherichia coli ECRC100 0.23 OKFHMN_13725 cytR DNA-binding transcriptional regulator CytR 0.61 OKFHMN_22615 aroC chorismate synthase low > 80
Escherichia coli ECRC99 0.23 KEDOAH_14435 cytR DNA-binding transcriptional regulator CytR 0.61 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli ECRC98 0.23 JDDGAC_17350 cytR DNA-binding transcriptional regulator CytR 0.61 JDDGAC_26575 aroC chorismate synthase low > 86
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_20830 LacI family transcriptional regulator 0.63 AO353_02250 chorismate synthase low > 101
Escherichia fergusonii Becca 0.23 EFB2_04684 HTH-type transcriptional repressor CytR 0.61 EFB2_01529 Chorismate synthase low > 86
Ralstonia solanacearum PSI07 0.23 RPSI07_RS19225 LacI family transcriptional regulator 0.84 RPSI07_RS15640 chorismate synthase — —
Ralstonia solanacearum GMI1000 0.23 RS_RS05020 LacI family transcriptional regulator 0.83 RS_RS07885 chorismate synthase low > 80
Rhizobium sp. OAE497 0.22 ABIE40_RS16645 LacI family DNA-binding transcriptional regulator 0.49 ABIE40_RS03980 chorismate synthase — —
Ralstonia solanacearum UW163 0.22 UW163_RS11705 LacI family transcriptional regulator 0.84 UW163_RS15160 chorismate synthase — —
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS14240 LacI family transcriptional regulator 0.84 RALBFv3_RS01850 chorismate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_03227 transcriptional regulator, LacI family 0.87 H281DRAFT_04489 chorismate synthase — —
Dickeya dianthicola 67-19 0.22 HGI48_RS21310 ribose operon transcriptional repressor RbsR 0.61 HGI48_RS14530 chorismate synthase — —
Dinoroseobacter shibae DFL-12 0.22 Dshi_2238 transcriptional regulator, LacI family (RefSeq) 0.53 Dshi_3275 Chorismate synthase (RefSeq) — —
Rhodanobacter denitrificans MT42 0.22 LRK55_RS08435 LacI family DNA-binding transcriptional regulator 0.64 LRK55_RS01505 chorismate synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS08670 LacI family transcriptional regulator 0.64 LRK54_RS01725 chorismate synthase — —
Pantoea sp. MT58 0.22 IAI47_00375 ribose operon transcriptional repressor RbsR 0.60 IAI47_06150 chorismate synthase — —
Lysobacter sp. OAE881 0.22 ABIE51_RS08800 LacI family DNA-binding transcriptional regulator 0.63 ABIE51_RS08220 chorismate synthase — —
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS11495 LacI family transcription regulator 0.79 HSERO_RS16525 chorismate synthase — —
Paraburkholderia graminis OAS925 0.22 ABIE53_004064 DNA-binding LacI/PurR family transcriptional regulator 0.87 ABIE53_002916 chorismate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_6032 Ribose operon repressor 0.63 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF4377 Galactose operon repressor, GalR-LacI family of transcriptional regulators 0.76 GFF5239 Chorismate synthase (EC 4.2.3.5) low > 90
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_2309 transcriptional regulator, LacI family 0.47 Ga0059261_2470 chorismate synthase (EC 4.2.3.5) — —
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS38555 substrate-binding domain-containing protein 0.86 QEN71_RS05215 chorismate synthase 0.45 101
Pseudomonas sp. RS175 0.21 PFR28_02734 Ribose operon repressor 0.62 PFR28_03126 Chorismate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_164 Ribose operon repressor 0.63 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.5254.1 Transcriptional regulator, LacI family 0.65 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS16160 LacI family DNA-binding transcriptional regulator 0.43 ABZR88_RS06995 chorismate synthase — —
Pseudomonas fluorescens SBW25 0.21 PFLU_RS15195 LacI family transcriptional regulator 0.63 PFLU_RS21280 chorismate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS15195 LacI family transcriptional regulator 0.63 PFLU_RS21280 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_2154 transcriptional regulator, LacI family 0.63 Psyr_1853 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_2154 transcriptional regulator, LacI family 0.63 Psyr_1853 chorismate synthase — —
Azospirillum sp. SherDot2 0.21 MPMX19_05875 Catabolite control protein A 0.56 MPMX19_01810 Chorismate synthase — —
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_3909 Ribose operon repressor 0.63 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) low > 87
Pseudomonas simiae WCS417 0.20 PS417_13650 LacI family transcriptional regulator 0.63 PS417_19315 chorismate synthase — —
Acidovorax sp. GW101-3H11 0.20 Ac3H11_1840 Ribose operon repressor 0.74 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) low > 79
Rhodanobacter sp. FW510-T8 0.20 OKGIIK_15435 LacI family transcriptional regulator 0.65 OKGIIK_04805 aroC chorismate synthase low > 52
Bacteroides ovatus ATCC 8483 0.20 BACOVA_02049 sugar-binding domain protein 0.38 BACOVA_03296 chorismate synthase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.19 BT3613 LacI family transcriptional regulator (NCBI ptt file) 0.38 BT2084 chorismate synthase (NCBI ptt file) — —
Phocaeicola dorei CL03T12C01 0.19 ABI39_RS03985 LacI family DNA-binding transcriptional regulator 0.39 ABI39_RS12645 chorismate synthase low > 72
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS09530 LacI family DNA-binding transcriptional regulator 0.39 HMPREF1058_RS16730 chorismate synthase low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS21915 LacI family transcriptional regulator 0.44 CA265_RS11645 chorismate synthase — —
Bifidobacterium breve UCC2003 0.18 BBR_RS17775 LacI family DNA-binding transcriptional regulator 0.20 BBR_RS15080 chorismate synthase low > 34
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS05535 LacI family DNA-binding transcriptional regulator 0.39 HMPREF1181_RS08365 chorismate synthase — —
Shewanella loihica PV-4 0.17 Shew_1111 LacI family transcription regulator (RefSeq) 0.61 Shew_2416 chorismate synthase (RefSeq) low > 60
Mycobacterium tuberculosis H37Rv 0.16 Rv3575c Transcriptional regulatory protein (probably LacI-family) 0.22 Rv2540c Probable chorismate synthase AroF (5-enolpyruvylshikimate-3-phosphate phospholyase) — —
Pseudomonas stutzeri RCH2 0.15 Psest_3356 D-fructose-responsive transcription factor 0.63 Psest_1903 chorismate synthase — —

Not shown: 0 genomes with orthologs for RR42_RS34650 only; 33 genomes with orthologs for RR42_RS06485 only