Conservation of cofitness between RR42_RS19740 and RR42_RS02750 in Cupriavidus basilensis FW507-4G11

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS19740 16S rRNA methyltransferase 1.0 RR42_RS02750 mannose-1-phosphate guanylyltransferase 0.33 20
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS08495 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.62 RALBFv3_RS11720 nucleotidyltransferase family protein low > 76
Ralstonia solanacearum UW163 0.63 UW163_RS05115 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.62 UW163_RS01865 nucleotidyltransferase family protein — —
Ralstonia solanacearum PSI07 0.63 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.65 RPSI07_RS21495 nucleotidyltransferase family protein low > 81
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS03815 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.61 ABZR87_RS07675 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU low > 80
Ralstonia solanacearum GMI1000 0.61 RS_RS16360 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.63 RS_RS02545 nucleotidyltransferase family protein low > 80
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS00655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.58 QEN71_RS02105 nucleotidyltransferase family protein low > 153
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS01940 16S rRNA methyltransferase 0.60 BPHYT_RS03280 mannose-1-phosphate guanylyltransferase low > 109
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS23345 16S rRNA methyltransferase 0.44 HSERO_RS03515 mannose-1-phosphate guanylyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_02152 16S rRNA (cytidine1402-2'-O)-methyltransferase 0.60 H281DRAFT_04635 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) low > 103
Paraburkholderia graminis OAS925 0.50 ABIE53_000470 16S rRNA (cytidine1402-2'-O)-methyltransferase 0.61 ABIE53_000795 MurNAc alpha-1-phosphate uridylyltransferase 0.59 3
Variovorax sp. OAS795 0.45 ABID97_RS00285 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.33 ABID97_RS02455 nucleotidyltransferase family protein low > 91
Variovorax sp. SCN45 0.44 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) 0.32 GFF7178 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) low > 127
Castellaniella sp019104865 MT123 0.42 ABCV34_RS14320 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.46 ABCV34_RS09510 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU 0.62 43
Dechlorosoma suillum PS 0.42 Dsui_0251 putative S-adenosylmethionine-dependent methyltransferase, YraL family 0.47 Dsui_1589 Nucleoside-diphosphate-sugar pyrophosphorylase family protein low > 51
Acidovorax sp. GW101-3H11 0.41 Ac3H11_4466 rRNA small subunit methyltransferase I 0.33 Ac3H11_651 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF2715 rRNA small subunit methyltransferase I 0.33 GFF2486 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Pseudomonas stutzeri RCH2 0.41 Psest_3270 probable S-adenosylmethionine-dependent methyltransferase, YraL family 0.40 Psest_3663 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) — —
Shewanella loihica PV-4 0.41 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) 0.39 Shew_0884 nucleotidyl transferase (RefSeq) low > 60
Marinobacter adhaerens HP15 0.41 HP15_554 tetrapyrrole methylase family protein 0.40 HP15_3283 nucleotidyltransferase family protein — —
Lysobacter sp. OAE881 0.41 ABIE51_RS04695 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.37 ABIE51_RS15870 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU low > 62
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4112 Protein of unknown function UPF0011 0.39 Psyr_4622 Nucleotidyl transferase low > 86
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_17110 methyltransferase 0.41 AO356_14360 mannose-1-phosphate guanylyltransferase 0.45 30
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4112 Protein of unknown function UPF0011 0.39 Psyr_4622 Nucleotidyl transferase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.4371.1 rRNA small subunit methyltransferase I 0.36 Xcc-8004.1680.1 FIG006611: nucleotidyltransferase 0.41 43
Shewanella sp. ANA-3 0.40 Shewana3_3879 hypothetical protein (RefSeq) 0.41 Shewana3_3204 nucleotidyl transferase (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_5346 rRNA small subunit methyltransferase I 0.42 Pf6N2E2_4810 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 0.32 9
Shewanella oneidensis MR-1 0.39 SO0301 hypothetical methyltransferase (NCBI ptt file) 0.40 SO3634 nucleotidyltransferase family protein (NCBI ptt file) low > 76
Pseudomonas fluorescens SBW25 0.39 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.41 PFLU_RS27440 nucleotidyltransferase family protein 0.53 103
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.41 PFLU_RS27440 nucleotidyltransferase family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_953 rRNA small subunit methyltransferase I 0.41 Pf1N1B4_2533 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Pseudomonas simiae WCS417 0.39 PS417_04590 methyltransferase 0.43 PS417_25785 mannose-1-phosphate guanylyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_15290 methyltransferase 0.40 AO353_07290 mannose-1-phosphate guanylyltransferase low > 101
Pseudomonas sp. RS175 0.38 PFR28_03597 Ribosomal RNA small subunit methyltransferase I 0.42 PFR28_04059 N-acetylmuramate alpha-1-phosphate uridylyltransferase low > 88
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS11380 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.40 ABZR86_RS09505 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU low > 74
Pseudomonas putida KT2440 0.38 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase 0.39 PP_0406 Nucleotidyltransferase family protein 0.37 78
Shewanella amazonensis SB2B 0.38 Sama_3353 hypothetical protein (RefSeq) 0.39 Sama_2814 nucleotidyl transferase (RefSeq) low > 62
Pseudomonas sp. S08-1 0.37 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.41 OH686_15065 Nucleotidyl transferase putative low > 80
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1643 rRNA small subunit methyltransferase I 0.41 PfGW456L13_1205 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) low > 87
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2109 probable S-adenosylmethionine-dependent methyltransferase, YraL family 0.40 B158DRAFT_0793 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) low > 40
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS12190 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.36 LRK54_RS03110 nucleotidyltransferase family protein low > 59
Rhodanobacter denitrificans MT42 0.36 LRK55_RS11925 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.36 LRK55_RS02860 nucleotidyltransferase family protein low > 63
Acinetobacter radioresistens SK82 0.33 MPMX26_02282 Ribosomal RNA small subunit methyltransferase I 0.41 MPMX26_01213 N-acetylmuramate alpha-1-phosphate uridylyltransferase low > 36
Agrobacterium fabrum C58 0.32 Atu0302 tetrapyrrole methylase family protein 0.18 Atu0025 hypothetical protein low > 89
Magnetospirillum magneticum AMB-1 0.31 AMB_RS22780 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.19 AMB_RS21470 nucleotidyltransferase family protein — —
Rhizobium sp. OAE497 0.31 ABIE40_RS01370 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.18 ABIE40_RS19370 nucleotidyltransferase family protein low > 107
Sinorhizobium meliloti 1021 0.31 SMc00416 hypothetical protein 0.15 SMc02758 nucleotidyl transferase low > 103
Rhodopseudomonas palustris CGA009 0.30 TX73_001680 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.18 TX73_000395 nucleotidyltransferase family protein low > 86
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_00143 ribosomal RNA small subunit methyltransferase I 0.16 CCNA_03650 mannose-1-phosphate guanyltransferase low > 67
Caulobacter crescentus NA1000 0.28 CCNA_00143 ribosomal RNA small subunit methyltransferase I 0.16 CCNA_03650 mannose-1-phosphate guanyltransferase low > 66
Rhodospirillum rubrum S1H 0.27 Rru_A3693 Protein of unknown function UPF0011 (NCBI) 0.17 Rru_A3436 Nucleotidyl transferase (NCBI) — —
Bosea sp. OAE506 0.27 ABIE41_RS03315 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.21 ABIE41_RS02715 nucleotidyltransferase family protein low > 77
Phaeobacter inhibens DSM 17395 0.21 PGA1_c26730 probable S-adenosylmethionine-dependent methyltransferase, YraL family 0.13 PGA1_c35330 nucleotidyl transferase-like protein low > 62

Not shown: 30 genomes with orthologs for RR42_RS19740 only; 6 genomes with orthologs for RR42_RS02750 only