| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS37445 | | LysR family transcriptional regulator | 1.0 | QEN71_RS22595 | | transcriptional repressor LexA | 0.39 | 16 |
| Burkholderia phytofirmans PsJN | 0.81 | BPHYT_RS30350 | | LysR family transcriptional regulator | 0.93 | BPHYT_RS08785 | | LexA repressor | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_01092 | | transcriptional regulator, LysR family | 0.92 | H281DRAFT_00777 | | SOS-response transcriptional repressor, LexA | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.77 | ABIE53_002240 | | DNA-binding transcriptional LysR family regulator | 0.88 | ABIE53_001989 | | repressor LexA | low | > 113 |
| Dechlorosoma suillum PS | 0.46 | Dsui_1258 | | transcriptional regulator | 0.51 | Dsui_2269 | | SOS regulatory protein LexA | low | > 51 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS13590 | | LysR family transcriptional regulator | 0.71 | RPSI07_RS17605 | | transcriptional repressor LexA | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS14800 | | LysR family transcriptional regulator | 0.72 | RR42_RS12615 | | LexA family transcriptional regulator | low | > 128 |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS03640 | | LysR family transcriptional regulator | 0.71 | RALBFv3_RS15760 | | transcriptional repressor LexA | — | — |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS10030 | | LysR family transcriptional regulator | 0.71 | UW163_RS13205 | | transcriptional repressor LexA | — | — |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS11085 | | LysR family transcriptional regulator | 0.70 | RS_RS06540 | | LexA repressor | — | — |
| Serratia liquefaciens MT49 | 0.44 | IAI46_07350 | | LysR family transcriptional regulator | 0.54 | IAI46_23005 | | repressor LexA | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS15530 | | LysR substrate-binding domain-containing protein | 0.70 | ABZR87_RS11330 | | transcriptional repressor LexA | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.43 | Xcc-8004.3097.1 | | Transcriptional regulator | 0.35 | Xcc-8004.3898.1 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | low | > 74 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_502 | | transcriptional regulator, LysR family protein | 0.54 | HP15_2336 | | LexA repressor | low | > 73 |
| Rahnella sp. WP5 | 0.40 | EX31_RS05190 | | LysR family transcriptional regulator | 0.53 | EX31_RS11845 | | repressor LexA | low | > 89 |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS06255 | | LysR family transcriptional regulator | 0.53 | BWI76_RS01875 | | repressor LexA | — | — |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_0543 | | Transcriptional regulator | 0.53 | EX28DRAFT_4269 | | SOS regulatory protein LexA | low | > 76 |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS11920 | | LysR substrate-binding domain-containing protein | 0.55 | ECOLIN_RS23335 | | transcriptional repressor LexA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_01685 | | HTH-type transcriptional regulator YhaJ | 0.55 | OHPLBJKB_04000 | | LexA repressor | — | — |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_24535 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.55 | OKFHMN_13065 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_03615 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.55 | KEDOAH_15095 | lexA | transcriptional repressor LexA | — | — |
| Escherichia fergusonii Becca | 0.38 | EFB2_01841 | | HTH-type transcriptional regulator YhaJ | 0.55 | EFB2_04560 | | LexA repressor | low | > 86 |
| Escherichia coli BW25113 | 0.38 | b2015 | yeeY | putative transcriptional regulator LYSR-type (VIMSS) | 0.55 | b4043 | lexA | LexA repressor (NCBI) | — | — |
| Escherichia coli ECRC101 | 0.38 | MCAODC_20405 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.55 | MCAODC_03565 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli BL21 | 0.38 | ECD_01918 | | LysR family putative transcriptional regulator | 0.55 | ECD_03915 | | transcriptional repressor of SOS regulon | — | — |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_15860 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.55 | NOLOHH_05220 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_28645 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.55 | JDDGAC_16690 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECRC62 | 0.38 | BNILDI_14760 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.55 | BNILDI_06300 | lexA | transcriptional repressor LexA | — | — |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_22480 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.55 | NIAGMN_10815 | lexA | transcriptional repressor LexA | — | — |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS17845 | | LysR family transcriptional regulator | 0.65 | HSERO_RS10365 | | LexA family transcriptional regulator | — | — |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_03240 | yeeY | Uncharacterized HTH-type transcriptional regulator YeeY | 0.55 | HEPCGN_11585 | lexA | transcriptional repressor LexA | — | — |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_02999 | | HTH-type transcriptional regulator YhaJ | 0.53 | MPMX20_00259 | | LexA repressor | — | — |
| Shewanella amazonensis SB2B | 0.37 | Sama_1388 | | LysR family transcriptional regulator (RefSeq) | 0.50 | Sama_3481 | | LexA repressor (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.36 | SO3318 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.45 | SO4603 | lexA | LexA repressor (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.36 | Shewana3_1223 | | LysR family transcriptional regulator (RefSeq) | 0.45 | Shewana3_3989 | | LexA repressor (RefSeq) | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF3915 | | Hypothetical transcriptional regulator yeeY | 0.55 | GFF1412 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | — | — |
| Variovorax sp. SCN45 | 0.35 | GFF4501 | | Transcriptional regulator, LysR family | 0.64 | GFF357 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | low | > 127 |
| Variovorax sp. OAS795 | 0.35 | ABID97_RS29065 | | LysR family transcriptional regulator | 0.64 | ABID97_RS16985 | | transcriptional repressor LexA | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.32 | CSW01_17100 | | LysR family transcriptional regulator | 0.52 | CSW01_00490 | | repressor LexA | — | — |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS02905 | | LysR family transcriptional regulator | 0.55 | DZA65_RS02890 | | repressor LexA | — | — |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS02750 | | LysR family transcriptional regulator | 0.55 | HGI48_RS02735 | | repressor LexA | — | — |
| Dickeya dadantii 3937 | 0.32 | DDA3937_RS02775 | | LysR family transcriptional regulator | 0.55 | DDA3937_RS02760 | | repressor LexA | — | — |
| Pectobacterium carotovorum WPP14 | 0.31 | HER17_RS18770 | | LysR family transcriptional regulator | 0.54 | HER17_RS18795 | | transcriptional repressor LexA | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.31 | GFF5181 | | LysR-family transcriptional regulator | 0.64 | GFF4501 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | low | > 90 |
| Pantoea sp. MT58 | 0.30 | IAI47_02820 | | LysR family transcriptional regulator | 0.53 | IAI47_17890 | | repressor LexA | — | — |
| Shewanella loihica PV-4 | 0.30 | Shew_2013 | | putative DNA-binding transcriptional regulator (RefSeq) | 0.51 | Shew_0127 | | LexA repressor (RefSeq) | low | > 60 |
| Erwinia tracheiphila SCR3 | 0.30 | LU632_RS02265 | | LysR family transcriptional regulator | 0.54 | LU632_RS22315 | lexA | transcriptional repressor LexA | — | — |
| Pseudomonas simiae WCS417 | 0.26 | PS417_08030 | | transcriptional regulator | 0.51 | PS417_07610 | | LexA family transcriptional regulator | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS08000 | | LysR family transcriptional regulator | 0.51 | PFLU_RS07685 | | transcriptional repressor LexA | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS08000 | | LysR family transcriptional regulator | 0.51 | PFLU_RS07685 | | transcriptional repressor LexA | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.20 | Psyr_3825 | | transcriptional regulator, LysR family | 0.52 | Psyr_3283 | | SOS-response transcriptional repressor, LexA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.20 | Psyr_3825 | | transcriptional regulator, LysR family | 0.52 | Psyr_3283 | | SOS-response transcriptional repressor, LexA | — | — |
| Pseudomonas sp. S08-1 | 0.19 | OH686_05450 | | Transcriptional regulator, LysR family | 0.50 | OH686_21960 | | repressor LexA | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.19 | PfGW456L13_4458 | | Transcriptional regulator, LysR family | 0.52 | PfGW456L13_4034 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.19 | AO353_18280 | | LysR family transcriptional regulator | 0.52 | AO353_00465 | | LexA family transcriptional regulator | — | — |
| Castellaniella sp019104865 MT123 | 0.18 | ABCV34_RS00975 | | LysR family transcriptional regulator | 0.53 | ABCV34_RS05120 | | transcriptional repressor LexA | low | > 48 |
| Pseudomonas fluorescens FW300-N2C3 | 0.18 | AO356_04235 | | LysR family transcriptional regulator | 0.52 | AO356_02295 | | LexA family transcriptional regulator | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.18 | Pf6N2E2_2682 | | Transcriptional regulator, LysR family | 0.52 | Pf6N2E2_2283 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | — | — |
| Agrobacterium fabrum C58 | 0.18 | Atu1209 | | transcriptional regulator, LysR family | 0.21 | Atu1395 | | LexA repressor | — | — |
| Pseudomonas sp. RS175 | 0.18 | PFR28_00748 | | HTH-type transcriptional regulator YhaJ | 0.52 | PFR28_01117 | | LexA repressor | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.18 | Pf1N1B4_548 | | Transcriptional regulator, LysR family | 0.53 | Pf1N1B4_3910 | | SOS-response repressor and protease LexA (EC 3.4.21.88) | — | — |
| Pseudomonas stutzeri RCH2 | 0.18 | Psest_1624 | | Transcriptional regulator | 0.52 | Psest_2646 | | SOS regulatory protein LexA | low | > 67 |
| Pseudomonas putida KT2440 | 0.17 | PP_4539 | | Transcriptional regulator, LysR family | 0.52 | PP_2143 | | transcriptional repressor | — | — |
| Azospirillum sp. SherDot2 | 0.17 | MPMX19_06778 | | HTH-type transcriptional regulator YhaJ | 0.18 | MPMX19_01010 | | LexA repressor | — | — |
| Rhizobium sp. OAE497 | 0.16 | ABIE40_RS08235 | | LysR family transcriptional regulator | 0.21 | ABIE40_RS08980 | | transcriptional repressor LexA | low | > 107 |
| Alteromonas macleodii MIT1002 | 0.16 | MIT1002_02374 | | HTH-type transcriptional activator AllS | 0.51 | MIT1002_04036 | | LexA repressor | low | > 70 |
| Sphingomonas koreensis DSMZ 15582 | 0.15 | Ga0059261_3906 | | Transcriptional regulator | 0.15 | Ga0059261_0934 | | SOS regulatory protein LexA | — | — |
| Rhodopseudomonas palustris CGA009 | 0.14 | TX73_022195 | | LysR family transcriptional regulator | 0.19 | TX73_015045 | | transcriptional repressor LexA | — | — |
| Caulobacter crescentus NA1000 | 0.14 | CCNA_00832 | | LysR-family transcriptional regulator | 0.22 | CCNA_01979 | | LexA repressor | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.14 | CCNA_00832 | | LysR-family transcriptional regulator | 0.22 | CCNA_01979 | | LexA repressor | — | — |
| Sinorhizobium meliloti 1021 | 0.14 | SMa0353 | | LysR family transcriptional regulator | 0.20 | SMc01183 | | LexA repressor | low | > 103 |
Not shown: 1 genomes with orthologs for QEN71_RS37445 only; 13 genomes with orthologs for QEN71_RS22595 only