Conservation of cofitness between QEN71_RS00175 and QEN71_RS05215 in Paraburkholderia sabiae LMG 24235

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 1.0 QEN71_RS05215 chorismate synthase 0.61 10
Paraburkholderia bryophila 376MFSha3.1 0.82 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase 0.96 H281DRAFT_04489 chorismate synthase — —
Paraburkholderia graminis OAS925 0.80 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase 0.97 ABIE53_002916 chorismate synthase — —
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS01475 16S rRNA methyltransferase 0.96 BPHYT_RS13705 chorismate synthase low > 109
Ralstonia solanacearum PSI07 0.48 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 RPSI07_RS15640 chorismate synthase — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.86 ABZR87_RS13790 chorismate synthase 0.37 44
Ralstonia solanacearum UW163 0.46 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 UW163_RS15160 chorismate synthase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 RALBFv3_RS01850 chorismate synthase — —
Ralstonia solanacearum GMI1000 0.46 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.83 RS_RS07885 chorismate synthase low > 80
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS20450 16S rRNA methyltransferase 0.86 RR42_RS06485 chorismate synthase low > 128
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS00355 methyltransferase 0.79 HSERO_RS16525 chorismate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.77 GFF5239 Chorismate synthase (EC 4.2.3.5) low > 90
Variovorax sp. SCN45 0.35 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) 0.71 GFF2627 Chorismate synthase (EC 4.2.3.5) low > 127
Castellaniella sp019104865 MT123 0.35 ABCV34_RS14225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.75 ABCV34_RS04300 chorismate synthase — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4461 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.78 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) low > 79
Dechlorosoma suillum PS 0.33 Dsui_0812 ribosomal RNA small subunit methyltransferase RsmB 0.77 Dsui_3204 chorismate synthase — —
Variovorax sp. OAS795 0.33 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.70 ABID97_RS19805 chorismate synthase — —
Dickeya dianthicola 67-19 0.31 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 HGI48_RS14530 chorismate synthase — —
Dickeya dianthicola ME23 0.31 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 DZA65_RS15465 chorismate synthase — —
Dickeya dadantii 3937 0.31 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 DDA3937_RS14580 chorismate synthase — —
Enterobacter sp. TBS_079 0.30 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B 0.62 MPMX20_03264 Chorismate synthase low > 85
Escherichia coli ECRC62 0.30 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 BNILDI_13170 aroC chorismate synthase low > 75
Escherichia coli ECOR27 0.30 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 NOLOHH_14250 aroC chorismate synthase low > 75
Escherichia coli ECOR38 0.30 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 HEPCGN_21820 aroC chorismate synthase low > 87
Escherichia coli BL21 0.30 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent 0.62 ECD_02254 chorismate synthase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.62 OHPLBJKB_01376 Chorismate synthase 0.73 28
Escherichia coli BW25113 0.30 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) 0.62 b2329 aroC chorismate synthase (NCBI) low > 76
Escherichia coli Nissle 1917 0.29 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 ECOLIN_RS13490 chorismate synthase — —
Escherichia fergusonii Becca 0.29 EFB2_00535 Ribosomal RNA small subunit methyltransferase B 0.62 EFB2_01529 Chorismate synthase low > 86
Escherichia coli ECRC99 0.29 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli ECRC102 0.29 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 NIAGMN_20390 aroC chorismate synthase — —
Escherichia coli ECRC98 0.29 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 JDDGAC_26575 aroC chorismate synthase low > 86
Escherichia coli ECRC101 0.29 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 MCAODC_13655 aroC chorismate synthase low > 87
Escherichia coli ECRC100 0.29 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.62 OKFHMN_22615 aroC chorismate synthase low > 80
Erwinia tracheiphila SCR3 0.29 LU632_RS22480 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.66 LU632_RS07775 aroC chorismate synthase low > 74
Pantoea sp. MT58 0.29 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.61 IAI47_06150 chorismate synthase — —
Pectobacterium carotovorum WPP14 0.29 HER17_RS02215 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.64 HER17_RS06935 chorismate synthase low > 75
Rahnella sp. WP5 0.29 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 EX31_RS19685 chorismate synthase — —
Enterobacter asburiae PDN3 0.29 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.61 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 0.63 GFF1950 Chorismate synthase (EC 4.2.3.5) low > 78
Marinobacter adhaerens HP15 0.28 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase 0.72 HP15_1838 chorismate synthase — —
Klebsiella michiganensis M5al 0.28 BWI76_RS25680 16S rRNA m5C967 methyltransferase 0.61 BWI76_RS20435 chorismate synthase low > 92
Shewanella amazonensis SB2B 0.27 Sama_0041 sun protein (RefSeq) 0.65 Sama_2159 chorismate synthase (RefSeq) — —
Serratia liquefaciens MT49 0.27 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.63 IAI46_18025 chorismate synthase 0.44 50
Alteromonas macleodii MIT1002 0.27 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B 0.66 MIT1002_01229 Chorismate synthase — —
Pseudomonas sp. S08-1 0.27 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase 0.66 OH686_00675 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.65 Psyr_1853 chorismate synthase — —
Pseudomonas stutzeri RCH2 0.26 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB 0.66 Psest_1903 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0017 16S rRNA m(5)C-967 methyltransferase 0.65 Psyr_1853 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_10630 16S rRNA methyltransferase 0.65 AO353_02250 chorismate synthase low > 101
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.65 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.65 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas simiae WCS417 0.25 PS417_00085 16S rRNA methyltransferase 0.64 PS417_19315 chorismate synthase — —
Pseudomonas fluorescens SBW25 0.25 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.64 PFLU_RS21280 chorismate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_11275 16S rRNA methyltransferase 0.65 AO356_19540 chorismate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.64 PFLU_RS21280 chorismate synthase — —
Pseudomonas putida KT2440 0.25 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.66 PP_1830 Chorismate synthase — —
Shewanella loihica PV-4 0.25 Shew_3738 sun protein (RefSeq) 0.63 Shew_2416 chorismate synthase (RefSeq) low > 60
Shewanella sp. ANA-3 0.25 Shewana3_0033 sun protein (RefSeq) 0.62 Shewana3_1469 chorismate synthase (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.65 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) low > 87
Pseudomonas sp. RS175 0.25 PFR28_04663 Ribosomal RNA small subunit methyltransferase B 0.64 PFR28_03126 Chorismate synthase — —
Lysobacter sp. OAE881 0.23 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.65 ABIE51_RS08220 chorismate synthase — —
Acinetobacter radioresistens SK82 0.23 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B 0.60 MPMX26_01340 Chorismate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.4741.1 hypothetical protein 0.67 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) low > 74
Caulobacter crescentus NA1000 0.18 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.47 CCNA_03256 chorismate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_00101 16S rRNA m5C methyltransferase RsmB 0.47 CCNA_03256 chorismate synthase low > 67
Rhodopseudomonas palustris CGA009 0.17 TX73_000155 transcription antitermination factor NusB 0.55 TX73_006170 chorismate synthase — —
Azospirillum sp. SherDot2 0.16 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B 0.56 MPMX19_01810 Chorismate synthase — —
Dinoroseobacter shibae DFL-12 0.16 Dshi_3033 Fmu (Sun) domain protein (RefSeq) 0.54 Dshi_3275 Chorismate synthase (RefSeq) — —
Azospirillum brasilense Sp245 0.16 AZOBR_RS00235 MFS transporter 0.59 AZOBR_RS10730 chorismate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.13 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase 0.50 A4249_RS08790 chorismate synthase — —

Not shown: 1 genomes with orthologs for QEN71_RS00175 only; 32 genomes with orthologs for QEN71_RS05215 only