Conservation of cofitness between Psyr_0485 and Psyr_5034 in Pseudomonas syringae pv. syringae B728a

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0485 Protein of unknown function DUF179 1.0 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region 0.41 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0485 Protein of unknown function DUF179 1.00 Psyr_5034 CBS:Protein of unknown function DUF21:Transporter-associated region low > 86
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_2350 UPF0301 protein YqgE 0.86 Pf1N1B4_2042 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas sp. RS175 0.75 PFR28_04234 hypothetical protein 0.88 PFR28_04481 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.74 PS417_26685 hypothetical protein 0.88 PS417_28050 hypothetical protein low > 88
Pseudomonas fluorescens SBW25 0.74 PFLU_RS28330 YqgE/AlgH family protein 0.88 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS28330 YqgE/AlgH family protein 0.88 PFLU_RS29735 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_13465 hypothetical protein 0.88 AO356_11010 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4609 UPF0301 protein YqgE 0.88 Pf6N2E2_4068 Phosphate regulon metal ion transporter containing CBS domains low > 103
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_08120 hypothetical protein 0.88 AO353_09865 hypothetical protein low > 101
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_1019 UPF0301 protein YqgE 0.87 PfGW456L13_760 Phosphate regulon metal ion transporter containing CBS domains low > 87
Pseudomonas sp. S08-1 0.69 OH686_10925 UPF0301 protein YqgE 0.78 OH686_13455 Phosphate regulon metal ion transporter containing CBS domains low > 80
Pseudomonas putida KT2440 0.69 PP_4995 putative protein possibly involved in the control of exopolysaccharide production 0.84 PP_5322 putative metal ion transporter low > 96
Pseudomonas stutzeri RCH2 0.66 Psest_0294 Putative transcriptional regulator 0.81 Psest_3847 Hemolysins and related proteins containing CBS domains low > 67
Ralstonia solanacearum GMI1000 0.46 RS_RS03395 YqgE/AlgH family protein 0.13 RS_RS11430 HlyC/CorC family transporter — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS04220 hypothetical protein 0.44 BPHYT_RS33815 hypothetical protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04814 putative transcriptional regulator 0.45 H281DRAFT_06055 Hemolysin, contains CBS domains low > 103
Paraburkholderia graminis OAS925 0.45 ABIE53_001128 putative transcriptional regulator 0.43 ABIE53_004821 CBS domain containing-hemolysin-like protein low > 113
Ralstonia solanacearum PSI07 0.45 RPSI07_RS20650 YqgE/AlgH family protein 0.13 RPSI07_RS13270 HlyC/CorC family transporter 0.52 14
Ralstonia solanacearum UW163 0.45 UW163_RS00955 DUF179 domain-containing protein 0.13 UW163_RS09720 HlyC/CorC family transporter — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS12610 DUF179 domain-containing protein 0.13 RALBFv3_RS03950 HlyC/CorC family transporter low > 76
Variovorax sp. OAS795 0.45 ABID97_RS24675 YqgE/AlgH family protein 0.13 ABID97_RS07170 hemolysin family protein low > 91
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS15875 hypothetical protein 0.14 RR42_RS04375 magnesium transporter low > 128
Variovorax sp. SCN45 0.44 GFF2157 UPF0301 protein YqgE 0.13 GFF2520 UPF0053 inner membrane protein YtfL low > 127
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS25795 YqgE/AlgH family protein 0.42 QEN71_RS17705 hemolysin family protein low > 153
Shewanella sp. ANA-3 0.42 Shewana3_1200 hypothetical protein (RefSeq) 0.12 Shewana3_0353 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.42 SO3346 conserved hypothetical protein (NCBI ptt file) 0.16 SO2815 CBS domain protein (NCBI ptt file) low > 76
Rhodopseudomonas palustris CGA009 0.40 TX73_004710 YqgE/AlgH family protein 0.28 TX73_002605 hemolysin family protein low > 86
Pectobacterium carotovorum WPP14 0.40 HER17_RS02630 YqgE/AlgH family protein 0.15 HER17_RS03970 hemolysin family protein low > 75
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS02315 transcriptional regulator 0.43 HSERO_RS05435 hemolysin protein low > 78
Serratia liquefaciens MT49 0.39 IAI46_21395 YqgE/AlgH family protein 0.14 IAI46_01760 HlyC/CorC family transporter low > 86
Dickeya dadantii 3937 0.39 DDA3937_RS18565 YqgE/AlgH family protein 0.13 DDA3937_RS17170 HlyC/CorC family transporter low > 74
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_02485 YqgE/AlgH family protein 0.11 CSW01_18340 HlyC/CorC family transporter low > 62
Pantoea sp. MT58 0.39 IAI47_03610 YqgE/AlgH family protein 0.14 IAI47_02710 HlyC/CorC family transporter low > 76
Sinorhizobium meliloti 1021 0.38 SMc00019 hypothetical protein 0.16 SMc00240 hypothetical protein low > 103
Dickeya dianthicola ME23 0.38 DZA65_RS19635 YqgE/AlgH family protein 0.13 DZA65_RS18310 HlyC/CorC family transporter low > 75
Shewanella amazonensis SB2B 0.38 Sama_2472 putative transcriptional regulator (RefSeq) 0.12 Sama_3284 hemolysin, putative (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.38 LU632_RS05475 YqgE/AlgH family protein 0.13 LU632_RS02100 hemolysin family protein low > 74
Dickeya dianthicola 67-19 0.38 HGI48_RS18500 YqgE/AlgH family protein 0.13 HGI48_RS17225 HlyC/CorC family transporter low > 71
Klebsiella michiganensis M5al 0.38 BWI76_RS24080 DUF179 domain-containing protein 0.14 BWI76_RS02765 membrane protein low > 92
Lysobacter sp. OAE881 0.38 ABIE51_RS16025 YqgE/AlgH family protein 0.15 ABIE51_RS06575 hemolysin family protein low > 62
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS10380 YqgE/AlgH family protein 0.15 ABZR86_RS19900 hemolysin family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.1720.1 UPF0301 protein YqgE 0.43 Xcc-8004.3404.1 FIG01211089: hypothetical protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3050 UPF0301 protein YqgE 0.14 GFF871 Putative membrane protein low > 78
Escherichia coli ECRC100 0.37 OKFHMN_19270 yqgE YqgE/AlgH family protein 0.13 OKFHMN_12015 paeA Polyamine export protein low > 80
Escherichia coli ECRC102 0.37 NIAGMN_17035 yqgE YqgE/AlgH family protein 0.13 NIAGMN_09865 paeA Polyamine export protein — —
Escherichia coli ECRC98 0.37 JDDGAC_22900 yqgE YqgE/AlgH family protein 0.13 JDDGAC_15655 paeA Polyamine export protein low > 86
Escherichia coli ECOR27 0.37 NOLOHH_11140 yqgE YqgE/AlgH family protein 0.13 NOLOHH_04280 paeA Polyamine export protein low > 75
Escherichia coli ECRC99 0.37 KEDOAH_08870 algH YqgE/AlgH family protein 0.13 KEDOAH_16140 paeA Polyamine export protein — —
Escherichia coli ECRC62 0.37 BNILDI_09720 yqgE YqgE/AlgH family protein 0.13 BNILDI_07240 tlyC Polyamine export protein low > 75
Escherichia coli ECRC101 0.37 MCAODC_09790 yqgE YqgE/AlgH family protein 0.13 MCAODC_02530 paeA Polyamine export protein low > 87
Escherichia coli BL21 0.37 ECD_02778 uncharacterized protein 0.13 ECD_04089 UPF0053 family inner membrane protein low > 61
Rhodanobacter denitrificans MT42 0.37 LRK55_RS03980 YqgE/AlgH family protein 0.12 LRK55_RS12675 hemolysin family protein — —
Escherichia coli ECOR38 0.37 HEPCGN_18575 yqgE YqgE/AlgH family protein 0.13 HEPCGN_10215 paeA Polyamine export protein low > 87
Escherichia fergusonii Becca 0.37 EFB2_00954 hypothetical protein 0.13 EFB2_04311 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.37 ECOLIN_RS16400 YqgE/AlgH family protein 0.13 ECOLIN_RS24495 hemolysin family protein low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_00770 hypothetical protein 0.13 OHPLBJKB_03816 hypothetical protein low > 73
Escherichia coli BW25113 0.37 b2948 yqgE orf, hypothetical protein (VIMSS) 0.13 b4218 ytfL predicted inner membrane protein (NCBI) low > 76
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS04210 YqgE/AlgH family protein 0.12 LRK54_RS12975 hemolysin family protein low > 59
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_11085 algH YqgE/AlgH family protein 0.14 OKGIIK_02350 tlyC Hemolysin-related protein, contains CBS domains, UPF0053 family low > 52
Rahnella sp. WP5 0.35 EX31_RS02670 YqgE/AlgH family protein 0.13 EX31_RS08705 HlyC/CorC family transporter low > 89
Shewanella loihica PV-4 0.35 Shew_1144 hypothetical protein (RefSeq) 0.12 Shew_0284 hypothetical protein (RefSeq) low > 60
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2986 Putative transcriptional regulator 0.13 EX28DRAFT_3404 Hemolysins and related proteins containing CBS domains low > 76
Enterobacter sp. TBS_079 0.35 MPMX20_03806 hypothetical protein 0.14 MPMX20_00495 hypothetical protein low > 85
Acinetobacter radioresistens SK82 0.33 MPMX26_00238 hypothetical protein 0.11 MPMX26_02321 hypothetical protein low > 36
Bacteroides thetaiotaomicron VPI-5482 0.22 BT1078 putative transcriptional regulator (NCBI ptt file) 0.15 BT0148 putative hemolysin (NCBI ptt file) low > 81
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS10130 YqgE/AlgH family protein 0.21 ABZR88_RS17090 hemolysin family protein low > 71
Bacteroides ovatus ATCC 8483 0.21 BACOVA_04061 putative ACR, COG1678 0.15 BACOVA_01289 hypothetical protein low > 94
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS07725 hypothetical protein 0.22 CA265_RS23615 hemolysin low > 88
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS16440 YqgE/AlgH family protein 0.16 HMPREF1181_RS05310 HlyC/CorC family transporter low > 56

Not shown: 24 genomes with orthologs for Psyr_0485 only; 5 genomes with orthologs for Psyr_5034 only