| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0090 | | 4-aminobutyrate aminotransferase apoenzyme | 1.0 | Psyr_0034 | | tryptophan synthase, beta chain | 0.37 | 8 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0090 | | 4-aminobutyrate aminotransferase apoenzyme | 1.00 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
| Pseudomonas lactucae CFBP13502 | 0.91 | GEMAOFIL_00404 | | 5-aminovalerate aminotransferase DavT | 0.85 | GEMAOFIL_00242 | | Tryptophan synthase beta chain | 0.62 | 79 |
| Pseudomonas segetis P6 | 0.91 | MPMX49_00505 | | 5-aminovalerate aminotransferase DavT | 0.85 | MPMX49_00373 | | Tryptophan synthase beta chain | — | — |
| Pseudomonas fluorescens SBW25 | 0.90 | PFLU_RS00915 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.85 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.90 | PFLU_RS00915 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.85 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_11510 | | 5-aminovalerate transaminase (EC 2.6.1.48) (from data) | 0.86 | AO353_10710 | | tryptophan synthase subunit beta | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.90 | Pf1N1B4_1733 | | 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.86 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_00900 | | 4-aminobutyrate aminotransferase | 0.85 | PS417_00185 | | tryptophan synthase subunit beta | low | > 88 |
| Pseudomonas orientalis W4I3 | 0.90 | QF045_RS03960 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.85 | QF045_RS03120 | | tryptophan synthase subunit beta | low | > 93 |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_494 | | 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.85 | PfGW456L13_566 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 87 |
| Pseudomonas sp. RS175 | 0.90 | PFR28_04756 | | 5-aminovalerate aminotransferase DavT | 0.85 | PFR28_04715 | | Tryptophan synthase beta chain | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.90 | Pf6N2E2_4013 | | 5-aminovalerate transaminase (EC 2.6.1.48) (from data) | 0.85 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 103 |
| Pseudomonas sp. DMC3 | 0.90 | GFF4255 | | 5-aminovalerate aminotransferase DavT | 0.85 | GFF676 | | Tryptophan synthase beta chain | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.89 | AO356_10715 | | 4-aminobutyrate aminotransferase | 0.85 | AO356_10915 | | tryptophan synthase subunit beta | low | > 104 |
| Pseudomonas sp. BP01 | 0.88 | JOY50_RS18510 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.90 | JOY50_RS21310 | trpB | tryptophan synthase subunit beta | low | > 84 |
| Pseudomonas putida KT2440 | 0.87 | PP_0214 | | 4-aminobutyrate aminotransferase | 0.90 | PP_0083 | | tryptophan synthase beta chain | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.87 | COO64_RS12480 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.91 | COO64_RS02275 | trpB | tryptophan synthase subunit beta | low | > 93 |
| Pseudomonas stutzeri RCH2 | 0.86 | Psest_3653 | | 4-aminobutyrate aminotransferase, prokaryotic type | 0.81 | Psest_0063 | | tryptophan synthase, beta subunit | low | > 67 |
| Pseudomonas aeruginosa PUPa3 | 0.82 | DQ20_RS38015 | gabT;go_function=4-aminobutyrate | 4-aminobutyrate--2-oxoglutarate transaminase | 0.84 | DQ20_RS58790 | trpB;go_function=tryptophan | tryptophan synthase subunit beta | 0.39 | 47 |
| Pseudomonas aeruginosa MRSN321 | 0.82 | DY961_RS21270 | gabT;go_function=4-aminobutyrate | 4-aminobutyrate--2-oxoglutarate transaminase | 0.84 | DY961_RS26385 | trpB;go_function=tryptophan | tryptophan synthase subunit beta | 0.56 | 41 |
| Pseudomonas aeruginosa PA14 | 0.81 | IKLFDK_24130 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.83 | IKLFDK_25375 | | tryptophan synthase subunit beta | low | > 98 |
| Pseudomonas sp. S08-1 | 0.79 | OH686_11880 | | 4-aminobutyrate transaminase | 0.84 | OH686_12425 | | tryptophan synthase, beta subunit | low | > 80 |
| Escherichia coli ECOR38 | 0.77 | HEPCGN_20155 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | low | > 88 |
| Escherichia coli ECRC102 | 0.76 | NIAGMN_18675 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECRC98 | 0.76 | JDDGAC_24570 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | low | > 87 |
| Escherichia coli ECRC101 | 0.76 | MCAODC_11430 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | low | > 87 |
| Escherichia coli ECRC100 | 0.76 | OKFHMN_20910 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | low | > 79 |
| Escherichia coli ECRC99 | 0.76 | KEDOAH_07230 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | — | — |
| Klebsiella pneumoniae MKP103 | 0.76 | KDGMDA_13830 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.51 | KDGMDA_19550 | | tryptophan synthase subunit beta | low | > 95 |
| Escherichia fergusonii Becca | 0.76 | EFB2_01268 | | 4-aminobutyrate aminotransferase GabT | 0.52 | EFB2_02665 | | Tryptophan synthase beta chain | low | > 86 |
| Escherichia coli BL21 | 0.76 | ECD_02518 | | 4-aminobutyrate aminotransferase, PLP-dependent | 0.52 | ECD_01235 | | tryptophan synthase, beta subunit | low | > 61 |
| Escherichia coli BW25113 | 0.76 | b2662 | gabT | 4-aminobutyrate aminotransferase (NCBI) | 0.52 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS14845 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.76 | OHPLBJKB_01070 | | 4-aminobutyrate aminotransferase GabT | 0.52 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | low | > 74 |
| Escherichia coli ECOR27 | 0.76 | NOLOHH_12735 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | low | > 76 |
| Escherichia coli ECRC62 | 0.76 | BNILDI_11295 | gabT | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF1567 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.52 | GFF2725 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 78 |
| Shewanella amazonensis SB2B | 0.70 | Sama_2636 | | gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) | 0.52 | Sama_2133 | | tryptophan synthase subunit beta (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.68 | Shewana3_3091 | | 4-aminobutyrate aminotransferase (RefSeq) | 0.51 | Shewana3_1516 | | tryptophan synthase subunit beta (RefSeq) | low | > 73 |
| Variovorax sp. OAS795 | 0.67 | ABID97_RS21585 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.61 | ABID97_RS08430 | | tryptophan synthase subunit beta | low | > 91 |
| Shewanella oneidensis MR-1 | 0.67 | SO1276 | gabT | 4-aminobutyrate aminotransferase (NCBI ptt file) | 0.51 | SO3023 | trpB | tryptophan synthase, beta subunit (NCBI ptt file) | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.66 | Ac3H11_4179 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.61 | Ac3H11_1534 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 79 |
| Cupriavidus basilensis FW507-4G11 | 0.58 | RR42_RS21370 | | 4-aminobutyrate aminotransferase | 0.63 | RR42_RS14360 | | tryptophan synthase subunit alpha | low | > 128 |
| Azospirillum brasilense Sp245 | 0.57 | AZOBR_RS19630 | | 4-aminobutyrate aminotransferase | 0.72 | AZOBR_RS00525 | | tryptophan synthase subunit beta | low | > 97 |
| Azospirillum sp. SherDot2 | 0.56 | MPMX19_04919 | | 5-aminovalerate aminotransferase DavT | 0.72 | MPMX19_02736 | | Tryptophan synthase beta chain | low | > 112 |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS05420 | | 4-aminobutyrate aminotransferase | 0.60 | HSERO_RS16475 | | tryptophan synthase subunit alpha | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS09880 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | HER17_RS10935 | | tryptophan synthase subunit beta | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS19980 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.64 | QEN71_RS17645 | | tryptophan synthase subunit beta | low | > 153 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS05190 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | ABZR87_RS14500 | | tryptophan synthase subunit beta | low | > 80 |
| Acinetobacter radioresistens SK82 | 0.54 | MPMX26_01998 | | 4-aminobutyrate aminotransferase PuuE | 0.62 | MPMX26_02617 | | Tryptophan synthase beta chain | low | > 36 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.54 | H281DRAFT_03179 | | 4-aminobutyrate aminotransferase apoenzyme | 0.64 | H281DRAFT_06067 | | tryptophan synthase, beta chain | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS23805 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | RPSI07_RS14730 | | tryptophan synthase subunit beta | low | > 81 |
| Variovorax sp. SCN45 | 0.54 | GFF921 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.61 | GFF3883 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_4294 | | 4-aminobutyrate aminotransferase, prokaryotic type | 0.52 | EX28DRAFT_0933 | | tryptophan synthase, beta subunit | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS00145 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | RS_RS09965 | | tryptophan synthase subunit beta | low | > 80 |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_04337 | | 4-aminobutyrate aminotransferase PuuE | 0.52 | MPMX20_02513 | | Tryptophan synthase beta chain | low | > 85 |
| Sinorhizobium meliloti 1021 | 0.53 | SM_b21186 | | 4-aminobutyrate aminotransferase | 0.70 | SMc02766 | | tryptophan synthase subunit beta | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.53 | ABIE53_004117 | | 4-aminobutyrate aminotransferase | 0.64 | ABIE53_004809 | | tryptophan synthase beta chain | — | — |
| Burkholderia phytofirmans PsJN | 0.53 | BPHYT_RS22435 | | 4-aminobutyrate aminotransferase | 0.64 | BPHYT_RS33875 | | tryptophan synthase subunit alpha | low | > 109 |
| Serratia liquefaciens MT49 | 0.53 | IAI46_22165 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | IAI46_14040 | | tryptophan synthase subunit beta | low | > 87 |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS12405 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.50 | DZA65_RS10945 | | tryptophan synthase subunit beta | low | > 75 |
| Pantoea agglomerans CFBP13505 P0401 | 0.53 | PagCFBP13505_RS07790 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | PagCFBP13505_RS07015 | | tryptophan synthase subunit beta | low | > 74 |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS26375 | | aspartate aminotransferase family protein | 0.51 | BWI76_RS11845 | | tryptophan synthase subunit beta | low | > 92 |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS11860 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.50 | HGI48_RS10465 | | tryptophan synthase subunit beta | low | > 71 |
| Pantoea sp. MT58 | 0.52 | IAI47_19475 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | IAI47_09170 | | tryptophan synthase subunit beta | low | > 76 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF2029 | | Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) | 0.60 | GFF3355 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 90 |
| Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS09545 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | — | — |
| Dickeya dadantii 3937 | 0.52 | DDA3937_RS11830 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.50 | DDA3937_RS10465 | | tryptophan synthase subunit beta | low | > 74 |
| Ralstonia solanacearum UW163 | 0.52 | UW163_RS04035 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.65 | UW163_RS11140 | | tryptophan synthase subunit beta | — | — |
| Rhizobium sp. OAE497 | 0.52 | ABIE40_RS00145 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.72 | ABIE40_RS19335 | | tryptophan synthase subunit beta | — | — |
| Shewanella loihica PV-4 | 0.52 | Shew_3172 | | 4-aminobutyrate aminotransferase (RefSeq) | 0.51 | Shew_2255 | | tryptophan synthase subunit beta (RefSeq) | 0.67 | 47 |
| Castellaniella sp019104865 MT123 | 0.51 | ABCV34_RS01765 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.63 | ABCV34_RS08435 | | tryptophan synthase subunit beta | — | — |
| Acinetobacter baumannii LAC-4 | 0.51 | RR41_RS01110 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.63 | RR41_RS03115 | | tryptophan synthase subunit beta | low | > 55 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_012015 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.70 | TX73_000360 | | tryptophan synthase subunit beta | — | — |
| Rahnella sp. WP5 | 0.51 | EX31_RS00095 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.52 | EX31_RS09975 | | tryptophan synthase subunit beta | low | > 89 |
| Marinobacter adhaerens HP15 | 0.50 | HP15_3708 | | 4-aminobutyrate aminotransferase | 0.62 | HP15_1827 | | tryptophan synthase, beta subunit | — | — |
| Erwinia amylovora T8 | 0.49 | OLJFJH_11345 | | 4-aminobutyrate--2-oxoglutarate transaminase | 0.53 | OLJFJH_13475 | | tryptophan synthase subunit beta | low | > 58 |
| Lysobacter sp. OAE881 | 0.27 | ABIE51_RS02780 | | aspartate aminotransferase family protein | 0.63 | ABIE51_RS08260 | | tryptophan synthase subunit beta | low | > 62 |
Not shown: 0 genomes with orthologs for Psyr_0090 only; 43 genomes with orthologs for Psyr_0034 only