Conservation of cofitness between PP_4697 and PP_4993 in Pseudomonas putida KT2440

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4697 poly(A) polymerase 1.0 PP_4993 Glutathione synthetase 0.23 11
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.88 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_16070 poly(A) polymerase 0.88 AO356_13475 glutathione synthetase low > 104
Pseudomonas simiae WCS417 0.82 PS417_23900 poly(A) polymerase 0.89 PS417_26675 glutathione synthetase — —
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.89 PFLU_RS28320 glutathione synthase 0.26 49
Pseudomonas fluorescens SBW25 0.82 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.89 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.87 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) low > 87
Pseudomonas sp. RS175 0.82 PFR28_03719 Poly(A) polymerase I 0.88 PFR28_04232 Glutathione synthetase low > 88
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_14395 poly(A) polymerase 0.86 AO353_08110 glutathione synthetase low > 101
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0830 Poly(A) polymerase 0.86 Psyr_0487 glutathione synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0830 Poly(A) polymerase 0.86 Psyr_0487 glutathione synthase low > 86
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.86 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3) low > 87
Pseudomonas sp. S08-1 0.71 OH686_17255 Poly(A) polymerase 0.84 OH686_10915 glutathione synthase low > 80
Pseudomonas stutzeri RCH2 0.70 Psest_0998 poly(A) polymerase 0.77 Psest_0296 glutathione synthetase, prokaryotic low > 67
Marinobacter adhaerens HP15 0.46 HP15_326 polyA polymerase 0.65 HP15_3512 glutathione synthetase low > 73
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_03145 polynucleotide adenylyltransferase PcnB 0.66 CSW01_02490 glutathione synthetase low > 62
Alteromonas macleodii MIT1002 0.44 MIT1002_03692 Poly(A) polymerase I precursor 0.55 MIT1002_03055 Glutathione synthetase low > 70
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0058 poly(A) polymerase 0.56 B158DRAFT_0189 glutathione synthase (EC 6.3.2.3) — —
Shewanella sp. ANA-3 0.43 Shewana3_3406 poly(A) polymerase (RefSeq) 0.64 Shewana3_3445 glutathione synthetase (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS26465 polynucleotide adenylyltransferase PcnB 0.46 QEN71_RS01415 glutathione synthase low > 153
Shewanella amazonensis SB2B 0.43 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) 0.64 Sama_0574 glutathione synthetase (RefSeq) low > 62
Serratia liquefaciens MT49 0.43 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.67 IAI46_21390 glutathione synthase low > 86
Shewanella oneidensis MR-1 0.43 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.63 SO0831 gshB glutathione synthetase (NCBI ptt file) low > 76
Paraburkholderia graminis OAS925 0.43 ABIE53_000870 poly(A) polymerase 0.44 ABIE53_000657 glutathione synthase low > 113
Shewanella loihica PV-4 0.42 Shew_3131 poly(A) polymerase (RefSeq) 0.62 Shew_3225 glutathione synthetase (RefSeq) low > 60
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04706 poly(A) polymerase 0.44 H281DRAFT_02010 glutathione synthase low > 103
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS03620 poly(A) polymerase 0.44 BPHYT_RS02560 glutathione synthetase low > 109
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) 0.57 Xcc-8004.1501.1 Glutathione synthetase (EC 6.3.2.3) — —
Enterobacter sp. TBS_079 0.42 MPMX20_00829 Poly(A) polymerase I 0.64 MPMX20_03805 Glutathione synthetase low > 85
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS17235 poly(A) polymerase 0.49 RR42_RS01780 glutathione synthetase low > 128
Dickeya dadantii 3937 0.42 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.65 DDA3937_RS18560 glutathione synthase low > 74
Lysobacter sp. OAE881 0.42 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB 0.59 ABIE51_RS05210 glutathione synthase — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_3732 poly(A) polymerase 0.65 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) 0.59 55
Dickeya dianthicola ME23 0.42 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.65 DZA65_RS19630 glutathione synthase low > 75
Klebsiella michiganensis M5al 0.41 BWI76_RS05005 polynucleotide adenylyltransferase 0.66 BWI76_RS24075 glutathione synthase 0.36 7
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.65 GFF3049 Glutathione synthetase (EC 6.3.2.3) low > 78
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS05300 polynucleotide adenylyltransferase PcnB 0.48 RALBFv3_RS10860 glutathione synthase low > 76
Dickeya dianthicola 67-19 0.41 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.65 HGI48_RS18495 glutathione synthase low > 71
Pantoea sp. MT58 0.41 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.62 IAI47_03615 glutathione synthase low > 76
Escherichia fergusonii Becca 0.41 EFB2_03901 Poly(A) polymerase I 0.66 EFB2_00955 Glutathione synthetase low > 86
Escherichia coli ECRC98 0.41 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.66 JDDGAC_22905 gshB glutathione synthase — —
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase 0.58 OKGIIK_11075 gshB glutathione synthase low > 52
Escherichia coli ECRC99 0.41 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.66 KEDOAH_08865 gshB glutathione synthase — —
Escherichia coli ECRC101 0.41 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.66 OKFHMN_19275 gshB glutathione synthase — —
Escherichia coli ECRC102 0.41 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.66 NIAGMN_17040 gshB glutathione synthase — —
Escherichia coli ECOR38 0.41 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.65 HEPCGN_18580 gshB glutathione synthase low > 85
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS15105 polynucleotide adenylyltransferase PcnB 0.58 LRK54_RS04200 glutathione synthase — —
Rhodanobacter denitrificans MT42 0.41 LRK55_RS14820 polynucleotide adenylyltransferase PcnB 0.58 LRK55_RS03970 glutathione synthase — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.66 ECOLIN_RS16395 glutathione synthase — —
Escherichia coli BL21 0.41 ECD_00142 poly(A) polymerase 0.66 ECD_02777 glutathione synthetase low > 60
Escherichia coli ECOR27 0.41 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.66 NOLOHH_11145 gshB glutathione synthase 0.88 8
Escherichia coli BW25113 0.41 b0143 pcnB poly(A) polymerase I (VIMSS) 0.66 b2947 gshB glutathione synthetase (NCBI) 0.30 26
Escherichia coli ECRC62 0.41 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.66 BNILDI_09725 gshB glutathione synthase — —
Escherichia coli ECRC101 0.41 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.66 MCAODC_09795 gshB glutathione synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_03519 Poly(A) polymerase I 0.66 OHPLBJKB_00771 Glutathione synthetase low > 73
Ralstonia solanacearum PSI07 0.41 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB 0.48 RPSI07_RS22450 glutathione synthase low > 81
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.48 ABZR87_RS06710 glutathione synthase low > 80
Ralstonia solanacearum GMI1000 0.41 RS_RS13165 polynucleotide adenylyltransferase PcnB 0.48 RS_RS01700 glutathione synthetase low > 80
Pectobacterium carotovorum WPP14 0.40 HER17_RS05570 polynucleotide adenylyltransferase PcnB 0.66 HER17_RS02635 glutathione synthase low > 75
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.58 ABZR86_RS10370 glutathione synthase — —
Castellaniella sp019104865 MT123 0.40 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB 0.46 ABCV34_RS04795 glutathione synthase low > 48
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS03145 poly(A) polymerase 0.46 HSERO_RS00435 glutathione synthetase low > 78
Dechlorosoma suillum PS 0.40 Dsui_1515 poly(A) polymerase 0.45 Dsui_0746 glutathione synthetase low > 51
Erwinia tracheiphila SCR3 0.39 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB 0.65 LU632_RS05480 gshB glutathione synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF3438 Poly(A) polymerase (EC 2.7.7.19) 0.43 GFF2650 Glutathione synthetase (EC 6.3.2.3) low > 90
Acidovorax sp. GW101-3H11 0.36 Ac3H11_1313 Poly(A) polymerase (EC 2.7.7.19) 0.47 Ac3H11_711 Glutathione synthetase (EC 6.3.2.3) — —
Acinetobacter radioresistens SK82 0.34 MPMX26_00543 Poly(A) polymerase I 0.63 MPMX26_02936 Glutathione synthetase low > 36

Not shown: 0 genomes with orthologs for PP_4697 only; 20 genomes with orthologs for PP_4993 only