Conservation of cofitness between PP_5310 and PP_4004 in Pseudomonas putida KT2440

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5310 junction-specific ATP-dependent DNA helicase 1.0 PP_4004 DNA translocase FtsK 0.50 10
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.76 PFLU_RS18530 DNA translocase FtsK 0.37 31
Pseudomonas fluorescens SBW25 0.89 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.76 PFLU_RS18530 DNA translocase FtsK low > 109
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.77 Pf1N1B4_4060 Cell division protein FtsK — —
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.77 PfGW456L13_2651 Cell division protein FtsK low > 87
Pseudomonas simiae WCS417 0.89 PS417_27870 ATP-dependent DNA helicase RecG 0.77 PS417_16490 cell division protein FtsK 0.44 6
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_09320 ATP-dependent DNA helicase RecG 0.77 AO353_27650 cell division protein FtsK low > 101
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_0201 ATP-dependent DNA helicase RecG 0.79 Psyr_3179 DNA translocase FtsK low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_0201 ATP-dependent DNA helicase RecG 0.79 Psyr_3179 DNA translocase FtsK low > 86
Pseudomonas sp. RS175 0.87 PFR28_04435 ATP-dependent DNA helicase RecG 0.74 PFR28_02608 DNA translocase FtsK low > 88
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_12380 ATP-dependent DNA helicase RecG 0.78 AO356_22175 cell division protein FtsK — —
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.77 Pf6N2E2_297 Cell division protein FtsK — —
Pseudomonas stutzeri RCH2 0.83 Psest_4192 ATP-dependent DNA helicase RecG 0.74 Psest_2032 DNA segregation ATPase FtsK/SpoIIIE and related proteins — —
Pseudomonas sp. S08-1 0.82 OH686_13505 ATP-dependent DNA helicase RecG 0.73 OH686_00260 DNA translocase FtsK — —
Marinobacter adhaerens HP15 0.60 HP15_309 DNA helicase, ATP-dependent, RecG 0.49 HP15_1819 DNA translocase FtsK — —
Shewanella loihica PV-4 0.55 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.43 Shew_2024 cell divisionFtsK/SpoIIIE (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.38 ABZR86_RS01810 DNA translocase FtsK — —
Rhodanobacter denitrificans MT42 0.55 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.43 LRK55_RS17495 DNA translocase FtsK — —
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.43 LRK54_RS17270 DNA translocase FtsK 0.46 10
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.43 OKGIIK_07620 ftsK cell division protein FtsK — —
Lysobacter sp. OAE881 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.41 ABIE51_RS11455 DNA translocase FtsK low > 62
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.43 Xcc-8004.2749.1 Cell division protein FtsK — —
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.48 B158DRAFT_1821 DNA segregation ATPase FtsK/SpoIIIE and related proteins 0.73 7
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.42 BPHYT_RS05075 cell division protein FtsK — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS17390 ATP-dependent DNA helicase RecG 0.39 RR42_RS04320 cell division protein FtsK low > 128
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.43 QEN71_RS03385 DNA translocase FtsK — —
Paraburkholderia graminis OAS925 0.46 ABIE53_000833 ATP-dependent DNA helicase RecG 0.38 ABIE53_001286 S-DNA-T family DNA segregation ATPase FtsK/SpoIIIE low > 113
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.38 H281DRAFT_00175 DNA translocase FtsK low > 103
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.42 ABZR87_RS16060 DNA translocase FtsK 0.54 40
Ralstonia solanacearum GMI1000 0.46 RS_RS13565 DNA helicase RecG 0.41 RS_RS11750 DNA translocase FtsK — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS11625 DNA helicase RecG 0.41 RPSI07_RS13190 DNA translocase FtsK low > 81
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS05675 DNA helicase RecG 0.41 RALBFv3_RS04160 DNA translocase FtsK — —
Ralstonia solanacearum UW163 0.46 UW163_RS07950 DNA helicase RecG 0.41 UW163_RS09510 DNA translocase FtsK — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.40 HSERO_RS09500 cell division protein FtsK 0.61 6
Dechlorosoma suillum PS 0.45 Dsui_0311 ATP-dependent DNA helicase RecG 0.41 Dsui_1691 DNA segregation ATPase, FtsK/SpoIIIE family — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 Ac3H11_1698 Cell division protein FtsK — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 GFF775 Cell division protein FtsK low > 90
Variovorax sp. OAS795 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.39 ABID97_RS07825 DNA translocase FtsK 4TM domain-containing protein — —
Variovorax sp. SCN45 0.40 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.38 GFF6036 DNA translocase FtsK low > 127
Magnetospirillum magneticum AMB-1 0.35 AMB_RS12400 ATP-dependent DNA helicase RecG 0.29 AMB_RS00090 DNA translocase FtsK — —
Sinorhizobium meliloti 1021 0.35 SMc00228 ATP-dependent DNA helicase RecG 0.29 SMc03808 cell division transmembrane protein — —
Azospirillum brasilense Sp245 0.35 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.30 AZOBR_RS02300 cell division protein FtsK low > 97
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS02470 ATP-dependent DNA helicase RecG 0.20 ABI39_RS18230 DNA translocase FtsK — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG 0.20 HMPREF1058_RS05875 DNA translocase FtsK — —
Azospirillum sp. SherDot2 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG 0.30 MPMX19_05518 hypothetical protein — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01504 ATP-dependent DNA helicase recG 0.30 CCNA_03819 cell division protein FtsK — —
Caulobacter crescentus NA1000 0.33 CCNA_01504 ATP-dependent DNA helicase recG 0.30 CCNA_03819 cell division protein FtsK — —
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG 0.21 HMPREF1078_RS13700 DNA translocase FtsK — —
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG 0.20 HMPREF1181_RS05910 DNA translocase FtsK — —
Bacteroides thetaiotaomicron VPI-5482 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) 0.20 BT4334 FtsK/SpoIIIE family protein (NCBI ptt file) — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.28 Ga0059261_2173 FtsK/SpoIIIE family/Domain of unknown function (DUF4117)/Ftsk gamma domain — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_15020 DNA helicase RecG 0.22 CA264_00870 DNA translocase FtsK — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_1162 ATP-dependent DNA helicase RecG 0.21 Echvi_1805 DNA segregation ATPase FtsK/SpoIIIE and related proteins — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.22 ABZR88_RS03760 DNA translocase FtsK — —
Rhodopseudomonas palustris CGA009 0.30 TX73_013795 ATP-dependent DNA helicase RecG 0.28 TX73_001455 DNA translocase FtsK 4TM domain-containing protein — —
Bosea sp. OAE506 0.30 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.31 ABIE41_RS04750 DNA translocase FtsK — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS04765 ATP-dependent DNA helicase RecG 0.29 A4249_RS13320 DNA translocase FtsK 4TM domain-containing protein — —
Rhodospirillum rubrum S1H 0.28 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) 0.29 Rru_A3705 Cell divisionFtsK/SpoIIIE (NCBI) — —

Not shown: 40 genomes with orthologs for PP_5310 only; 2 genomes with orthologs for PP_4004 only