Conservation of cofitness between PP_4700 and PP_2327 in Pseudomonas putida KT2440

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4700 pantothenate synthetase 1.0 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.55 10
Pseudomonas sp. RS175 0.84 PFR28_03722 Pantothenate synthetase 0.96 PFR28_00966 HTH-type transcriptional regulator CysB — —
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_16055 pantoate--beta-alanine ligase 0.97 AO356_03180 CysB family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.97 Pf6N2E2_2465 Cys regulon transcriptional activator CysB — —
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_14380 pantoate--beta-alanine ligase 0.97 AO353_19060 CysB family transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.97 PfGW456L13_2230 Cys regulon transcriptional activator CysB low > 87
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_2853 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.96 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS25755 pantoate--beta-alanine ligase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas simiae WCS417 0.80 PS417_23915 pantoate--beta-alanine ligase 0.96 PS417_08460 CysB family transcriptional regulator — —
Pseudomonas fluorescens SBW25 0.80 PFLU_RS25755 pantoate--beta-alanine ligase 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas sp. S08-1 0.78 OH686_17240 pantoate--beta-alanine ligase 0.93 OH686_01730 Cys regulon transcriptional activator CysB — —
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_0827 pantothenate synthetase 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.78 8
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_0827 pantothenate synthetase 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.66 19
Pseudomonas stutzeri RCH2 0.71 Psest_0995 pantoate--beta-alanine ligase 0.91 Psest_2329 Transcriptional regulator — —
Marinobacter adhaerens HP15 0.63 HP15_323 pantothenate synthetase 0.80 HP15_1854 transcriptional regulator, LysR family — —
Shewanella amazonensis SB2B 0.55 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq) 0.66 Sama_1324 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella oneidensis MR-1 0.54 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file) 0.66 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.54 MIT1002_03695 Pantothenate synthetase 0.68 MIT1002_02005 Cys regulon transcriptional activator — —
Shewanella sp. ANA-3 0.54 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) 0.65 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella loihica PV-4 0.53 Shew_3134 pantoate--beta-alanine ligase (RefSeq) 0.66 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Serratia liquefaciens MT49 0.53 IAI46_21245 pantoate--beta-alanine ligase 0.68 IAI46_13965 HTH-type transcriptional regulator CysB — —
Escherichia fergusonii Becca 0.53 EFB2_03911 Pantothenate synthetase 0.67 EFB2_02652 HTH-type transcriptional regulator CysB — —
Escherichia coli ECOR38 0.52 HEPCGN_08380 panC pantoate--beta-alanine ligase 0.67 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC102 0.52 NIAGMN_08255 panC pantoate--beta-alanine ligase 0.67 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC98 0.52 JDDGAC_14000 panC pantoate--beta-alanine ligase 0.67 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC99 0.52 KEDOAH_17750 panC pantoate--beta-alanine ligase 0.67 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.52 OKFHMN_10405 panC pantoate--beta-alanine ligase 0.67 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.52 MCAODC_00920 panC pantoate--beta-alanine ligase 0.67 MCAODC_15665 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECOR27 0.52 NOLOHH_02750 panC pantoate--beta-alanine ligase 0.67 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC62 0.52 BNILDI_08920 panC pantoate--beta-alanine ligase 0.67 BNILDI_18415 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli BL21 0.52 ECD_00132 pantothenate synthetase 0.67 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor — —
Escherichia coli BW25113 0.52 b0133 panC pantoate--beta-alanine ligase (NCBI) 0.67 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03528 Pantothenate synthetase 0.67 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 73
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_0062 pantoate--beta-alanine ligase 0.43 B158DRAFT_2455 Transcriptional regulator — —
Pectobacterium carotovorum WPP14 0.51 HER17_RS05555 pantoate--beta-alanine ligase 0.68 HER17_RS10870 HTH-type transcriptional regulator CysB 0.82 55
Dickeya dianthicola ME23 0.51 DZA65_RS17160 pantoate--beta-alanine ligase 0.68 DZA65_RS11020 HTH-type transcriptional regulator CysB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.68 GFF2712 Cys regulon transcriptional activator CysB — —
Klebsiella michiganensis M5al 0.51 BWI76_RS04990 pantoate--beta-alanine ligase 0.67 BWI76_RS11930 LysR family transcriptional regulator CysB — —
Dickeya dadantii 3937 0.51 DDA3937_RS15960 pantoate--beta-alanine ligase 0.68 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS00820 pantoate--beta-alanine ligase 0.37 ABZR86_RS05885 LysR substrate-binding domain-containing protein — —
Erwinia tracheiphila SCR3 0.50 LU632_RS20105 panC pantoate--beta-alanine ligase 0.67 LU632_RS12550 cysB HTH-type transcriptional regulator CysB — —
Rhodanobacter denitrificans MT42 0.50 LRK55_RS14835 pantoate--beta-alanine ligase 0.35 LRK55_RS00690 LysR substrate-binding domain-containing protein low > 63
Dickeya dianthicola 67-19 0.50 HGI48_RS16075 pantoate--beta-alanine ligase 0.69 HGI48_RS10540 HTH-type transcriptional regulator CysB low > 71
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS15120 pantoate--beta-alanine ligase 0.35 LRK54_RS00915 LysR substrate-binding domain-containing protein — —
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_03130 pantoate--beta-alanine ligase 0.70 CSW01_09545 HTH-type transcriptional regulator CysB — —
Pantoea sp. MT58 0.50 IAI47_15660 pantoate--beta-alanine ligase 0.67 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Rahnella sp. WP5 0.49 EX31_RS03285 pantoate--beta-alanine ligase 0.68 EX31_RS09890 HTH-type transcriptional regulator CysB low > 89
Acinetobacter radioresistens SK82 0.49 MPMX26_00546 Pantothenate synthetase 0.40 MPMX26_02171 HTH-type transcriptional regulator SsuR — —
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_03890 panC pantoate--beta-alanine ligase 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator low > 52
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3729 pantoate--beta-alanine ligase 0.67 EX28DRAFT_0946 Transcriptional regulator — —
Enterobacter sp. TBS_079 0.47 MPMX20_00826 Pantothenate synthetase 0.67 MPMX20_02501 HTH-type transcriptional regulator CysB — —
Lysobacter sp. OAE881 0.46 ABIE51_RS08030 pantoate--beta-alanine ligase 0.34 ABIE51_RS15850 LysR family transcriptional regulator — —
Dechlorosoma suillum PS 0.45 Dsui_1470 pantoate--beta-alanine ligase 0.52 Dsui_1988 transcriptional regulator — —
Ralstonia solanacearum GMI1000 0.44 RS_RS11985 pantoate--beta-alanine ligase 0.46 RS_RS06760 CysB family HTH-type transcriptional regulator — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS15520 pantoate--beta-alanine ligase 0.47 HSERO_RS08245 CysB family transcriptional regulator — —
Ralstonia solanacearum UW163 0.44 UW163_RS09235 pantoate--beta-alanine ligase 0.46 UW163_RS13430 CysB family HTH-type transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS04435 pantoate--beta-alanine ligase 0.46 RALBFv3_RS00100 CysB family HTH-type transcriptional regulator — —
Variovorax sp. OAS795 0.44 ABID97_RS07430 pantoate--beta-alanine ligase 0.46 ABID97_RS02980 CysB family HTH-type transcriptional regulator low > 91
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00150 pantothenate synthetase 0.49 H281DRAFT_00782 transcriptional regulator, LysR family — —
Variovorax sp. SCN45 0.43 GFF2578 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.47 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl low > 127
Ralstonia solanacearum PSI07 0.43 RPSI07_RS12935 pantoate--beta-alanine ligase 0.46 RPSI07_RS17385 CysB family HTH-type transcriptional regulator — —
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS25065 pantoate--beta-alanine ligase 0.48 QEN71_RS22570 CysB family HTH-type transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS00030 pantoate--beta-alanine ligase 0.47 ABZR87_RS11555 CysB family HTH-type transcriptional regulator — —
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS16055 pantothenate synthetase 0.45 RR42_RS12245 transcriptional regulator — —
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3051.1 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.30 Xcc-8004.1249.1 Transcriptional regulator — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14585 pantoate--beta-alanine ligase 0.37 ABCV34_RS08230 CysB family HTH-type transcriptional regulator — —
Paraburkholderia graminis OAS925 0.41 ABIE53_001260 pantoate--beta-alanine ligase 0.49 ABIE53_001994 LysR family cys regulon transcriptional activator — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS04925 pantothenate synthetase 0.49 BPHYT_RS08810 CysB family transcriptional regulator — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_3840 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.44 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.46 55
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1220 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.48 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI — —

Not shown: 28 genomes with orthologs for PP_4700 only; 1 genomes with orthologs for PP_2327 only