Conservation of cofitness between PP_5104 and PP_0422 in Pseudomonas putida KT2440

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5104 thiazole synthase 1.0 PP_0422 Indole-3-glycerol phosphate synthase 0.53 18
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_13375 thiazole synthase 0.87 AO356_14440 indole-3-glycerol-phosphate synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 103
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_08215 thiazole synthase 0.86 AO353_07210 indole-3-glycerol-phosphate synthase low > 101
Pseudomonas sp. RS175 0.91 PFR28_04252 Thiazole synthase 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_4740 thiazole-phosphate synthase 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_4740 thiazole-phosphate synthase 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas fluorescens SBW25 0.89 PFLU_RS28420 thiazole synthase 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_1000 Thiazole biosynthesis protein ThiG 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS28420 thiazole synthase 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.36 37
Pseudomonas simiae WCS417 0.89 PS417_26775 thiazole synthase 0.86 PS417_25710 indole-3-glycerol-phosphate synthase low > 88
Pseudomonas sp. S08-1 0.87 OH686_14285 Thiazole synthase 0.81 OH686_15140 Indole-3-glycerol phosphate synthase 0.58 52
Pseudomonas stutzeri RCH2 0.85 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis 0.77 Psest_3647 Indole-3-glycerol phosphate synthase low > 67
Lysobacter sp. OAE881 0.69 ABIE51_RS16545 thiazole synthase 0.53 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC — —
Marinobacter adhaerens HP15 0.68 HP15_3274 thiazole synthase 0.62 HP15_3291 indole-3-glycerol phosphate synthase — —
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS11645 thiazole synthase 0.50 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC — —
Dechlorosoma suillum PS 0.66 Dsui_1014 putative enzyme of thiazole biosynthesis 0.51 Dsui_0168 Indole-3-glycerol phosphate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 74
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_11895 thiS thiazole synthase 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC low > 52
Acinetobacter radioresistens SK82 0.65 MPMX26_01107 Thiazole synthase 0.49 MPMX26_00983 Indole-3-glycerol phosphate synthase low > 36
Castellaniella sp019104865 MT123 0.64 ABCV34_RS14510 thiazole synthase 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS02130 thiazole synthase 0.45 HSERO_RS19450 indole-3-glycerol-phosphate synthase low > 78
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_01957 thiazole biosynthesis protein ThiG 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase — —
Caulobacter crescentus NA1000 0.56 CCNA_01957 thiazole biosynthesis protein ThiG 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.52 A4249_RS07975 thiazole synthase 0.42 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC — —
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_0576 thiG thiazole synthase 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase — —
Azospirillum sp. SherDot2 0.43 MPMX19_00262 Thiazole synthase 0.44 MPMX19_01014 Indole-3-glycerol phosphate synthase low > 112
Mycobacterium tuberculosis H37Rv 0.41 Rv0417 Probable thiamin biosynthesis protein ThiG (thiazole biosynthesis protein) 0.28 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_20420 thiazole synthase 0.23 CA264_05070 indole-3-glycerol phosphate synthase low > 74
Azospirillum brasilense Sp245 0.40 AZOBR_RS30960 thiazole synthase 0.42 AZOBR_RS07450 indole-3-glycerol-phosphate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_3564 Uncharacterized enzyme of thiazole biosynthesis 0.34 Echvi_2508 Indole-3-glycerol phosphate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS20180 thiazole synthase 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase low > 88
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS04800 thiazole synthase 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS23435 thiazole synthase 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS27930 thiazole synthase 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum GMI1000 0.35 RS_RS00535 thiazole synthase 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1 — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS09925 thiazole synthase 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum UW163 0.35 UW163_RS03655 thiazole synthase 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS17775 thiazole synthase 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS08825 thiazole synthase 0.33 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC — —
Bacteroides ovatus ATCC 8483 0.35 BACOVA_02359 thiazole biosynthesis protein ThiG 0.33 BACOVA_03783 indole-3-glycerol phosphate synthase 0.65 44
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS17755 thiazole synthase 0.24 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC low > 72
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_05639 thiazole-phosphate synthase 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase — —
Paraburkholderia graminis OAS925 0.35 ABIE53_003714 thiazole synthase 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase — —
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS01305 thiazole synthase 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.34 BT0651 thiamine biosynthesis protein ThiG (NCBI ptt file) 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.32 58
Variovorax sp. OAS795 0.34 ABID97_RS15315 thiazole synthase 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC low > 91
Bacteroides stercoris CC31F 0.34 HMPREF1181_RS14680 thiazole synthase 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC low > 56
Variovorax sp. SCN45 0.34 GFF1188 Thiazole synthase (EC 2.8.1.10) 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Rhodopseudomonas palustris CGA009 0.33 TX73_018530 thiazole synthase 0.44 TX73_014985 indole-3-glycerol phosphate synthase TrpC — —
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU2094 thiG thiG protein (TIGR) 0.20 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.89 5
Phaeobacter inhibens DSM 17395 0.33 PGA1_c09070 thiazole biosynthesis protein ThiG 0.45 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF246 Thiazole biosynthesis protein ThiG 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Agrobacterium fabrum C58 0.31 Atu2566 thiamin biosynthesis ThiG 0.41 Atu1688 indole-3-glycerol-phosphate synthase low > 89
Acidovorax sp. GW101-3H11 0.31 Ac3H11_1059 Thiazole biosynthesis protein ThiG 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Bosea sp. OAE506 0.30 ABIE41_RS20185 thiazole synthase 0.41 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC — —
Dinoroseobacter shibae DFL-12 0.28 Dshi_0912 thiazole biosynthesis family protein (RefSeq) 0.44 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) — —
Sinorhizobium meliloti 1021 0.27 SM_b20617 thiazole synthase 0.40 SMc00236 Indole-3-glycerol phosphate synthase — —

Not shown: 36 genomes with orthologs for PP_5104 only; 7 genomes with orthologs for PP_0422 only