Conservation of cofitness between PP_0366 and PP_0365 in Pseudomonas putida KT2440

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0366 dethiobiotin synthetase 1.0 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase 0.91 3
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_1151 Dethiobiotin synthetase (EC 6.3.3.3) 0.68 PfGW456L13_1150 Biotin synthesis protein BioC 0.96 3
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2491 Dethiobiotin synthetase (EC 6.3.3.3) 0.68 Pf1N1B4_2490 Biotin synthesis protein BioC 0.90 2
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_14155 dethiobiotin synthetase 0.72 AO356_14150 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.88 4
Pseudomonas fluorescens SBW25 0.77 PFLU_RS27630 dethiobiotin synthase 0.70 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.72 4
Pseudomonas sp. RS175 0.77 PFR28_04099 ATP-dependent dethiobiotin synthetase BioD 1 0.68 PFR28_04100 Malonyl-[acyl-carrier protein] O-methyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_4764 Dethiobiotin synthetase (EC 6.3.3.3) 0.71 Pf6N2E2_4763 Biotin synthesis protein BioC 0.93 1
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS27630 dethiobiotin synthase 0.70 PFLU_RS27635 malonyl-ACP O-methyltransferase BioC 0.87 3
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_07505 dethiobiotin synthetase 0.70 AO353_07510 malonyl-[acyl-carrier protein] O-methyltransferase BioC 0.97 1
Pseudomonas simiae WCS417 0.76 PS417_25985 dethiobiotin synthetase 0.70 PS417_25990 malonyl-CoA O-methyltransferase 0.60 4
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_4683 dethiobiotin synthase 0.70 Psyr_4684 biotin synthesis protein BioC 0.72 4
Pseudomonas sp. S08-1 0.72 OH686_10335 dethiobiotin synthase 0.69 OH686_10340 malonyl-acyl carrier protein O-methyltransferase BioC 0.97 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_4683 dethiobiotin synthase 0.70 Psyr_4684 biotin synthesis protein BioC 0.64 4
Pseudomonas stutzeri RCH2 0.62 Psest_0415 dethiobiotin synthase 0.68 Psest_0414 biotin biosynthesis protein BioC 0.79 5
Shewanella loihica PV-4 0.53 Shew_1722 dethiobiotin synthase (RefSeq) 0.17 Shew_1721 methyltransferase type 11 (RefSeq) — —
Shewanella sp. ANA-3 0.51 Shewana3_2516 bioD dithiobiotin synthetase (RefSeq) 0.19 Shewana3_2517 biotin biosynthesis protein BioC (RefSeq) — —
Shewanella oneidensis MR-1 0.51 SO2737 bioD dethiobiotin synthase (NCBI ptt file) 0.20 SO2738 bioC biotin synthesis protein BioC (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.49 HP15_2482 dethiobiotin synthetase 0.27 HP15_2483 protein containing methyltransferase type 11 domain low > 73
Pantoea sp. MT58 0.47 IAI47_13515 ATP-dependent dethiobiotin synthetase BioD 0.27 IAI47_13520 malonyl-ACP O-methyltransferase BioC low > 76
Dickeya dianthicola ME23 0.47 DZA65_RS08980 ATP-dependent dethiobiotin synthetase BioD 0.29 DZA65_RS08975 malonyl-ACP O-methyltransferase BioC low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS08690 ATP-dependent dethiobiotin synthetase BioD 0.29 HGI48_RS08685 malonyl-ACP O-methyltransferase BioC low > 71
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS12700 dethiobiotin synthase 0.29 ABZR86_RS15820 malonyl-ACP O-methyltransferase BioC — —
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2213 dethiobiotin synthase 0.21 EX28DRAFT_2214 malonyl-acyl carrier protein O-methyltransferase BioC low > 76
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_05660 dethiobiotin synthase 0.32 CSW01_05655 malonyl-[acyl-carrier protein] O-methyltransferase BioC low > 62
Enterobacter sp. TBS_079 0.45 MPMX20_01406 ATP-dependent dethiobiotin synthetase BioD 1 0.21 MPMX20_01405 Malonyl-[acyl-carrier protein] O-methyltransferase 0.22 48
Dickeya dadantii 3937 0.45 DDA3937_RS08525 ATP-dependent dethiobiotin synthetase BioD 0.30 DDA3937_RS08520 malonyl-ACP O-methyltransferase BioC low > 74
Serratia liquefaciens MT49 0.45 IAI46_06540 ATP-dependent dethiobiotin synthetase BioD 0.33 IAI46_06535 malonyl-ACP O-methyltransferase BioC low > 86
Escherichia coli Nissle 1917 0.44 ECOLIN_RS04145 dethiobiotin synthase 0.25 ECOLIN_RS04140 malonyl-ACP O-methyltransferase BioC — —
Escherichia fergusonii Becca 0.44 EFB2_03327 ATP-dependent dethiobiotin synthetase BioD 1 0.25 EFB2_03328 Malonyl-[acyl-carrier protein] O-methyltransferase low > 86
Klebsiella michiganensis M5al 0.44 BWI76_RS08775 dethiobiotin synthase 0.22 BWI76_RS08770 malonyl-ACP O-methyltransferase BioC 0.19 56
Escherichia coli BL21 0.44 ECD_00745 dethiobiotin synthetase 0.25 ECD_00744 malonyl-ACP O-methyltransferase, SAM-dependent low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_02935 ATP-dependent dethiobiotin synthetase BioD 1 0.25 OHPLBJKB_02936 Malonyl-[acyl-carrier protein] O-methyltransferase low > 73
Escherichia coli ECRC101 0.44 MCAODC_25600 bioD dethiobiotin synthase 0.25 MCAODC_25605 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli ECRC99 0.44 KEDOAH_21525 bioD dethiobiotin synthase 0.25 KEDOAH_21520 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli ECRC98 0.44 JDDGAC_10020 bioD dethiobiotin synthase 0.25 JDDGAC_10025 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli BW25113 0.44 b0778 bioD dethiobiotin synthetase (NCBI) 0.25 b0777 bioC predicted methltransferase, enzyme of biotin synthesis (NCBI) 0.37 5
Pectobacterium carotovorum WPP14 0.44 HER17_RS13445 dethiobiotin synthase 0.31 HER17_RS13450 malonyl-ACP O-methyltransferase BioC low > 75
Escherichia coli ECRC101 0.44 OKFHMN_06385 bioD dethiobiotin synthase 0.25 OKFHMN_06390 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli ECRC102 0.44 NIAGMN_04430 bioD dethiobiotin synthase 0.25 NIAGMN_04435 bioC malonyl-ACP O-methyltransferase BioC — —
Escherichia coli ECOR27 0.44 NOLOHH_22755 bioD dethiobiotin synthase 0.24 NOLOHH_22760 bioC malonyl-ACP O-methyltransferase BioC low > 57
Escherichia coli ECOR38 0.43 HEPCGN_01655 bioD dethiobiotin synthase 0.25 HEPCGN_01650 bioC malonyl-ACP O-methyltransferase BioC low > 85
Dechlorosoma suillum PS 0.43 Dsui_2884 dethiobiotin synthase 0.27 Dsui_2883 biotin biosynthesis protein BioC 0.91 1
Escherichia coli ECRC62 0.43 BNILDI_21025 bioD dethiobiotin synthase 0.25 BNILDI_21030 bioC malonyl-ACP O-methyltransferase BioC — —
Erwinia tracheiphila SCR3 0.43 LU632_RS09145 bioD dethiobiotin synthase 0.26 LU632_RS09140 bioC malonyl-ACP O-methyltransferase BioC — —
Lysobacter sp. OAE881 0.42 ABIE51_RS17990 dethiobiotin synthase 0.29 ABIE51_RS01160 malonyl-ACP O-methyltransferase BioC — —
Shewanella amazonensis SB2B 0.42 Sama_1441 bioD dithiobiotin synthetase (RefSeq) 0.19 Sama_1440 biotin synthesis protein BioC (RefSeq) — —
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_16455 bioD dethiobiotin synthase 0.31 OKGIIK_13670 bioC malonyl-ACP O-methyltransferase BioC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF674 Dethiobiotin synthetase (EC 6.3.3.3) 0.22 GFF673 Biotin synthesis protein BioC low > 78
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS07180 dethiobiotin synthase 0.31 LRK54_RS10240 malonyl-ACP O-methyltransferase BioC — —
Rahnella sp. WP5 0.41 EX31_RS23710 ATP-dependent dethiobiotin synthetase BioD 0.30 EX31_RS23705 malonyl-ACP O-methyltransferase BioC low > 89
Rhodanobacter denitrificans MT42 0.41 LRK55_RS06915 dethiobiotin synthase 0.31 LRK55_RS09880 malonyl-ACP O-methyltransferase BioC — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0869 dethiobiotin synthase 0.33 B158DRAFT_0867 biotin biosynthesis protein BioC — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS12255 dethiobiotin synthetase 0.18 HSERO_RS20805 methyltransferase — —
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS02155 dithiobiotin synthetase 0.17 BPHYT_RS02630 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.35 UW163_RS14160 dethiobiotin synthase 0.14 UW163_RS02645 SAM-dependent methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS00825 dethiobiotin synthase 0.14 RALBFv3_RS10935 SAM-dependent methyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_02096 dethiobiotin synthetase 0.18 H281DRAFT_01996 malonyl-CoA O-methyltransferase — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS16695 dethiobiotin synthase 0.14 RPSI07_RS22375 SAM-dependent methyltransferase — —
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS12345 dethiobiotin synthase 0.13 ABZR87_RS06785 methyltransferase domain-containing protein — —
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.4530.1 Dethiobiotin synthetase (EC 6.3.3.3) 0.26 Xcc-8004.498.1 Biotin synthesis protein BioC — —
Ralstonia solanacearum GMI1000 0.32 RS_RS07440 ATP-dependent dethiobiotin synthetase BioD 0.15 RS_RS01775 SAM-dependent methyltransferase — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS01090 dethiobiotin synthase 0.18 QEN71_RS01485 methyltransferase domain-containing protein — —
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS00935 dethiobiotin synthetase 0.16 RR42_RS01865 amidophosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.14 ABCV34_RS15285 dethiobiotin synthase 0.13 ABCV34_RS15290 methyltransferase domain-containing protein low > 48
Phaeobacter inhibens DSM 17395 0.13 PGA1_c09140 dethiobiotin synthetase BioD 0.11 PGA1_c09170 putative biotin synthesis protein BioC 0.54 3

Not shown: 18 genomes with orthologs for PP_0366 only; 1 genomes with orthologs for PP_0365 only