Conservation of cofitness between IAI47_01955 and IAI47_00455 in Pantoea sp. MT58

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_01955 aspartate aminotransferase family protein 1.0 IAI47_00455 nitrogen regulation protein NR(II) 0.80 7
Erwinia tracheiphila SCR3 0.89 LU632_RS22810 aspartate aminotransferase family protein 0.94 LU632_RS22140 glnL nitrogen regulation protein NR(II) 0.93 2
Escherichia coli Nissle 1917 0.81 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 ECOLIN_RS22300 nitrogen regulation protein NR(II) low > 52
Escherichia coli ECOR38 0.80 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 HEPCGN_12735 glnL nitrogen regulation protein NR(II) low > 85
Rahnella sp. WP5 0.80 EX31_RS04630 aspartate aminotransferase family protein 0.91 EX31_RS15875 nitrogen regulation protein NR(II) low > 89
Escherichia fergusonii Becca 0.80 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.89 EFB2_04747 Sensory histidine kinase/phosphatase NtrB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.88 GFF2221 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 78
Escherichia coli BW25113 0.80 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.89 b3869 glnL sensory histidine kinase in two-component regulatory system with GlnG (NCBI) low > 76
Escherichia coli BL21 0.80 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.89 ECD_03754 sensory histidine kinase in two-component regulatory system with GlnG 0.51 19
Escherichia coli ECRC101 0.80 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 MCAODC_04605 glnL nitrogen regulation protein NR(II)
Escherichia coli ECRC98 0.80 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 JDDGAC_17730 glnL nitrogen regulation protein NR(II)
Escherichia coli ECRC99 0.80 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 KEDOAH_14045 glnL nitrogen regulation protein NR(II)
Escherichia coli ECRC102 0.80 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 NIAGMN_11860 glnL nitrogen regulation protein NR(II)
Escherichia coli ECRC101 0.80 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 OKFHMN_14105 glnL nitrogen regulation protein NR(II)
Escherichia coli ECOR27 0.80 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 NOLOHH_06235 glnL nitrogen regulation protein NR(II) low > 57
Escherichia coli ECRC62 0.80 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.89 BNILDI_05295 glnL nitrogen regulation protein NR(II)
Dickeya dianthicola 67-19 0.80 HGI48_RS19570 aspartate aminotransferase family protein 0.86 HGI48_RS21230 nitrogen regulation protein NR(II) low > 71
Enterobacter sp. TBS_079 0.80 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.90 MPMX20_04596 Sensory histidine kinase/phosphatase NtrB low > 85
Dickeya dianthicola ME23 0.80 DZA65_RS20655 aspartate aminotransferase family protein 0.86 DZA65_RS22205 nitrogen regulation protein NR(II) low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.89 OHPLBJKB_04183 Sensory histidine kinase/phosphatase NtrB low > 73
Dickeya dadantii 3937 0.79 DDA3937_RS19450 aspartate aminotransferase family protein 0.86 DDA3937_RS00130 nitrogen regulation protein NR(II) 0.78 29
Serratia liquefaciens MT49 0.79 IAI46_23590 aspartate aminotransferase family protein 0.90 IAI46_24955 nitrogen regulation protein NR(II) low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS01910 aspartate aminotransferase family protein 0.86 HER17_RS21435 nitrogen regulation protein NR(II) low > 75
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.90 EX28DRAFT_4351 Signal transduction histidine kinase, nitrogen specific low > 76
Klebsiella michiganensis M5al 0.78 BWI76_RS26000 aspartate aminotransferase family protein 0.91 BWI76_RS00390 two-component system sensor histidine kinase NtrB low > 92
Pseudomonas sp. S08-1 0.67 OH686_21290 Succinylornithine transaminase 0.42 OH686_10635 Nitrogen regulation protein NtrB low > 80
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.44 Psyr_4821 PAS/PAC sensor signal transduction histidine kinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.44 Psyr_4821 PAS/PAC sensor signal transduction histidine kinase low > 86
Pseudomonas putida KT2440 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.43 PP_5047 two-component system sensory histidine kinase/phosphatase GlnL/GlnG low > 96
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.42 Pf6N2E2_3825 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 103
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03025 acetylornithine aminotransferase 0.43 AO353_12150 histidine kinase low > 101
Pseudomonas fluorescens SBW25 0.65 PFLU_RS23315 aspartate aminotransferase family protein 0.42 PFLU_RS01690 nitrogen regulation protein NR(II) low > 109
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_18725 acetylornithine aminotransferase 0.42 AO356_09725 histidine kinase low > 104
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS23315 aspartate aminotransferase family protein 0.42 PFLU_RS01690 nitrogen regulation protein NR(II) low > 109
Pseudomonas simiae WCS417 0.65 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.43 PS417_01640 histidine kinase low > 88
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) 0.43 PfGW456L13_346 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 87
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.42 Pf1N1B4_1610 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 87
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.55 CSW01_13860 nitrogen regulation protein NR(II) low > 62
Shewanella amazonensis SB2B 0.64 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.46 Sama_3426 nitrogen regulation protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.44 MIT1002_03185 Nitrogen regulation protein NR(II) low > 70
Pseudomonas sp. RS175 0.63 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.43 PFR28_04945 Sensory histidine kinase/phosphatase NtrB low > 88
Pseudomonas stutzeri RCH2 0.63 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.41 Psest_3931 Signal transduction histidine kinase, nitrogen specific low > 67
Shewanella oneidensis MR-1 0.63 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.47 SO4471 ntrB nitrogen regulation protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.62 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.48 Shewana3_0259 signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) low > 73
Shewanella loihica PV-4 0.62 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.46 Shew_3560 signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family 0.29 B158DRAFT_0715 Signal transduction histidine kinase, nitrogen specific low > 40
Marinobacter adhaerens HP15 0.61 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.39 HP15_426 signal transduction histidine kinase, nitrogen specific, NtrB low > 73
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_06478 succinylornithine aminotransferase apoenzyme 0.30 H281DRAFT_00453 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL low > 103
Lysobacter sp. OAE881 0.48 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.26 ABIE51_RS01365 ATP-binding protein
Rhodanobacter denitrificans MT42 0.45 LRK55_RS06335 acetylornithine/succinylornithine family transaminase 0.22 LRK55_RS07735 ATP-binding protein low > 63
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS17400 acetylornithine transaminase 0.26 ABZR86_RS15510 ATP-binding protein low > 74
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_17070 astC acetylornithine transaminase 0.25 OKGIIK_14470 PAS domain-containing sensor histidine kinase low > 52
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS06590 acetylornithine/succinylornithine family transaminase 0.22 LRK54_RS07985 ATP-binding protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.1117.1 hypothetical protein 0.22 Xcc-8004.251.1 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 74
Rhizobium sp. OAE497 0.42 ABIE40_RS02320 aspartate aminotransferase family protein 0.22 ABIE40_RS09085 nitrogen regulation protein NR(II) low > 107
Rhodopseudomonas palustris CGA009 0.41 TX73_024810 aspartate aminotransferase family protein 0.22 TX73_013415 nitrogen regulation protein NR(II)
Bosea sp. OAE506 0.41 ABIE41_RS04340 aspartate aminotransferase family protein 0.21 ABIE41_RS16790 ATP-binding protein
Agrobacterium fabrum C58 0.41 Atu0428 acetylornithine aminotransferase 0.22 Atu1445 two component sensor kinase
Sinorhizobium meliloti 1021 0.41 SMc02138 acetylornithine transaminase 0.22 SMc01042 nitrogen regulation protein low > 103
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_3205 transaminase, acetylornithine/succinylornithine family 0.15 Ga0059261_0139 Signal transduction histidine kinase, nitrogen specific low > 68
Rhodospirillum rubrum S1H 0.39 Rru_A1147 Acetylornithine and succinylornithine aminotransferase (NCBI) 0.22 Rru_A1677 Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) low > 58
Azospirillum brasilense Sp245 0.39 AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (from data) 0.23 AZOBR_RS14425 ATPase
Magnetospirillum magneticum AMB-1 0.38 AMB_RS01605 aspartate aminotransferase family protein 0.24 AMB_RS11945 PAS domain-containing sensor histidine kinase
Azospirillum sp. SherDot2 0.38 MPMX19_02177 Succinylornithine transaminase/acetylornithine aminotransferase 0.23 MPMX19_01111 Sensory histidine kinase/phosphatase NtrB low > 112
Phaeobacter inhibens DSM 17395 0.37 PGA1_c24230 acetylornithine aminotransferase ArgD 0.20 PGA1_c14780 nitrogen regulation protein NtrB
Dechlorosoma suillum PS 0.36 Dsui_0023 acetylornithine/succinylornithine aminotransferase 0.38 Dsui_1050 signal transduction histidine kinase, nitrogen specific low > 51
Castellaniella sp019104865 MT123 0.34 ABCV34_RS12095 acetylornithine transaminase 0.30 ABCV34_RS03535 nitrogen regulation protein NR(II)
Acidovorax sp. GW101-3H11 0.32 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11) 0.33 Ac3H11_4431 Nitrogen regulation protein NtrB (EC 2.7.13.3)
Variovorax sp. SCN45 0.31 GFF3927 N-acetylornithine aminotransferase (EC 2.6.1.11) 0.32 GFF3067 Nitrogen regulation protein NtrB (EC 2.7.13.3)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3420 Acetylornithine aminotransferase (EC 2.6.1.11) 0.32 GFF5270 Nitrogen regulation protein NtrB (EC 2.7.13.3) low > 90
Variovorax sp. OAS795 0.31 ABID97_RS08635 aspartate aminotransferase family protein 0.33 ABID97_RS09940 nitrogen regulation protein NR(II)

Not shown: 21 genomes with orthologs for IAI47_01955 only; 11 genomes with orthologs for IAI47_00455 only