| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS17670 | | LysR family transcriptional regulator | 1.0 | HSERO_RS07150 | | apolipoprotein acyltransferase | 0.31 | 7 |
| Paraburkholderia graminis OAS925 | 0.87 | ABIE53_005534 | | DNA-binding transcriptional LysR family regulator | 0.68 | ABIE53_000852 | | putative amidohydrolase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.85 | H281DRAFT_01284 | | transcriptional regulator, LysR family | 0.68 | H281DRAFT_04689 | | nitrilase | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.85 | BPHYT_RS21645 | | LysR family transcriptional regulator | 0.68 | BPHYT_RS03545 | | apolipoprotein acyltransferase | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.75 | QEN71_RS23475 | | LysR family transcriptional regulator | 0.68 | QEN71_RS26550 | | carbon-nitrogen hydrolase family protein | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.67 | RR42_RS28515 | | LysR family transcriptional regulator | 0.64 | RR42_RS05880 | | acyltransferase | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.39 | Ac3H11_2888 | | Transcriptional regulator, LysR family | 0.51 | Ac3H11_1207 | | FIG003879: Predicted amidohydrolase | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF5537 | | Transcriptional regulator, LysR family | 0.53 | GFF2535 | | FIG003879: Predicted amidohydrolase | low | > 90 |
| Pseudomonas simiae WCS417 | 0.38 | PS417_18795 | | LysR family transcriptional regulator | 0.40 | PS417_04280 | | carbon-nitrogen hydrolase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.37 | PFLU_RS20860 | | LysR family transcriptional regulator | 0.40 | PFLU_RS04335 | | carbon-nitrogen hydrolase family protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.37 | PFLU_RS20860 | | LysR family transcriptional regulator | 0.40 | PFLU_RS04335 | | carbon-nitrogen hydrolase family protein | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.37 | RS_RS03085 | | LysR family transcriptional regulator | 0.62 | RS_RS13310 | | carbon-nitrogen hydrolase family protein | low | > 80 |
| Ralstonia solanacearum UW163 | 0.35 | UW163_RS18270 | | LysR family transcriptional regulator | 0.61 | UW163_RS08175 | | carbon-nitrogen hydrolase family protein | — | — |
| Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS00870 | | LysR family transcriptional regulator | 0.36 | AZOBR_RS02920 | | amidohydrolase | low | > 97 |
| Ralstonia solanacearum IBSBF1503 | 0.35 | RALBFv3_RS16915 | | LysR family transcriptional regulator | 0.61 | RALBFv3_RS05450 | | carbon-nitrogen hydrolase family protein | low | > 76 |
| Rhizobium sp. OAE497 | 0.33 | ABIE40_RS11195 | | LysR family transcriptional regulator | 0.34 | ABIE40_RS17345 | | carbon-nitrogen hydrolase family protein | low | > 107 |
| Azospirillum sp. SherDot2 | 0.33 | MPMX19_00088 | | HTH-type transcriptional regulator HdfR | 0.35 | MPMX19_02429 | | Deaminated glutathione amidase | low | > 112 |
| Pseudomonas stutzeri RCH2 | 0.33 | Psest_1630 | | Transcriptional regulator | 0.40 | Psest_3321 | | Predicted amidohydrolase | low | > 67 |
| Bosea sp. OAE506 | 0.33 | ABIE41_RS23080 | | LysR substrate-binding domain-containing protein | 0.14 | ABIE41_RS12325 | | N-carbamoyl-D-amino-acid hydrolase | low | > 77 |
| Pseudomonas putida KT2440 | 0.32 | PP_1863 | | Transcriptional regulator, LysR family | 0.39 | PP_0939 | | Carbon-nitrogen hydrolase family protein | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.31 | PfGW456L13_2241 | | Transcriptional regulator, LysR family | 0.41 | PfGW456L13_5027 | | FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) | low | > 87 |
| Marinobacter adhaerens HP15 | 0.31 | HP15_2775 | | transcriptional regulator protein, LysR family | 0.41 | HP15_2449 | | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase | low | > 73 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_22455 | | Transcriptional regulator, LysR family | 0.44 | OH686_08585 | | Uncharacterized subgroup of the nitrilase superfamily | low | > 80 |
| Sinorhizobium meliloti 1021 | 0.31 | SMc04163 | | transcriptional regulator | 0.34 | SMc02442 | | hydrolase | low | > 103 |
| Agrobacterium fabrum C58 | 0.30 | Atu1765 | | transcriptional regulator, LysR family | 0.33 | Atu3510 | | amidohydrolase | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_03135 | | LysR family transcriptional regulator | 0.41 | AO356_07100 | | carbon-nitrogen hydrolase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.30 | Pf6N2E2_2456 | | Transcriptional regulator, LysR family | 0.41 | Pf6N2E2_3281 | | FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_272 | | Transcriptional regulator, LysR family | 0.41 | Pf1N1B4_1093 | | FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) | low | > 87 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_00975 | | HTH-type transcriptional regulator HdfR | 0.41 | PFR28_00160 | | Deaminated glutathione amidase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_19100 | | LysR family transcriptional regulator | 0.40 | AO353_05220 | | carbon-nitrogen hydrolase | low | > 101 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_013870 | | LysR substrate-binding domain-containing protein | 0.36 | TX73_003100 | | carbon-nitrogen hydrolase family protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.28 | Psyr_3624 | | transcriptional regulator, LysR family | 0.42 | Psyr_4157 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.28 | Psyr_3624 | | transcriptional regulator, LysR family | 0.42 | Psyr_4157 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase | low | > 86 |
| Rhodanobacter denitrificans FW104-10B01 | 0.27 | LRK54_RS15435 | | LysR substrate-binding domain-containing protein | 0.13 | LRK54_RS00340 | | carbon-nitrogen hydrolase | — | — |
| Variovorax sp. SCN45 | 0.27 | GFF5707 | | Transcriptional regulator, LysR family | 0.50 | GFF5445 | | FIG003879: Uncharacterized subgroup of the nitrilase superfamily | low | > 127 |
| Caulobacter crescentus NA1000 Δfur | 0.27 | CCNA_03625 | | transcriptional regulator CztR | 0.31 | CCNA_00871 | | carbon-nitrogen hydrolase family protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.27 | CCNA_03625 | | transcriptional regulator CztR | 0.31 | CCNA_00871 | | carbon-nitrogen hydrolase family protein | low | > 66 |
| Rhodanobacter denitrificans MT42 | 0.27 | LRK55_RS15155 | | LysR substrate-binding domain-containing protein | 0.12 | LRK55_RS00030 | | carbon-nitrogen hydrolase | — | — |
| Pantoea sp. MT58 | 0.27 | IAI47_18925 | | LysR family transcriptional regulator | 0.21 | IAI47_14065 | | deaminated glutathione amidase | low | > 76 |
| Phaeobacter inhibens DSM 17395 | 0.26 | PGA1_c21890 | | transcriptional regulator, LysR family | 0.35 | PGA1_c34700 | | putative carbon-nitrogen hydrolase | low | > 62 |
| Serratia liquefaciens MT49 | 0.26 | IAI46_07280 | | LysR family transcriptional regulator | 0.37 | IAI46_22690 | | carbon-nitrogen hydrolase family protein | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.25 | Dshi_2777 | | transcriptional regulator, LysR family (RefSeq) | 0.29 | Dshi_3506 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) | low | > 64 |
| Ralstonia sp. UNC404CL21Col | 0.25 | ABZR87_RS17245 | | LysR substrate-binding domain-containing protein | 0.61 | ABZR87_RS01100 | | carbon-nitrogen hydrolase family protein | low | > 80 |
| Erwinia tracheiphila SCR3 | 0.25 | LU632_RS07960 | lrhA | transcriptional regulator LrhA | 0.24 | LU632_RS16420 | | deaminated glutathione amidase | — | — |
| Dickeya dianthicola 67-19 | 0.25 | HGI48_RS14315 | | transcriptional regulator LrhA | 0.21 | HGI48_RS19475 | | deaminated glutathione amidase | low | > 71 |
| Dickeya dianthicola ME23 | 0.25 | DZA65_RS14990 | | transcriptional regulator LrhA | 0.18 | DZA65_RS06520 | | deaminated glutathione amidase | low | > 75 |
| Shewanella sp. ANA-3 | 0.25 | Shewana3_0014 | | transcriptional regulator (RefSeq) | 0.35 | Shewana3_3642 | | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.24 | MIT1002_02974 | | HTH-type transcriptional regulator GltC | 0.42 | MIT1002_00226 | | (R)-stereoselective amidase | low | > 70 |
| Dickeya dadantii 3937 | 0.23 | DDA3937_RS14340 | | transcriptional regulator LrhA | 0.18 | DDA3937_RS06130 | | deaminated glutathione amidase | low | > 74 |
| Enterobacter sp. TBS_079 | 0.23 | MPMX20_03219 | | HTH-type transcriptional regulator HdfR | 0.18 | MPMX20_01285 | | Deaminated glutathione amidase | low | > 85 |
| Dyella japonica UNC79MFTsu3.2 | 0.23 | ABZR86_RS17870 | | LysR family transcriptional regulator | 0.13 | ABZR86_RS02765 | | carbon-nitrogen hydrolase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF1893 | | LysR family transcriptional regulator lrhA | 0.16 | GFF4538 | | Aliphatic amidase AmiE (EC 3.5.1.4) | low | > 78 |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS20200 | | transcriptional regulator LrhA | 0.21 | BWI76_RS07990 | | carbon-nitrogen hydrolase | — | — |
| Enterobacter asburiae PDN3 | 0.23 | EX28DRAFT_0320 | | Transcriptional regulator | 0.21 | EX28DRAFT_2337 | | Predicted amidohydrolase | low | > 76 |
| Escherichia coli BL21 | 0.22 | ECD_02214 | | transcriptional repressor of flagellar, motility and chemotaxis genes | 0.19 | ECD_00595 | | putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) | low | > 61 |
| Escherichia coli ECOR27 | 0.22 | NOLOHH_14450 | lrhA | transcriptional regulator LrhA | 0.19 | NOLOHH_23785 | tatE | deaminated glutathione amidase | low | > 75 |
| Escherichia coli ECRC102 | 0.22 | NIAGMN_20600 | lrhA | transcriptional regulator LrhA | 0.19 | NIAGMN_05465 | tatE | deaminated glutathione amidase | — | — |
| Escherichia fergusonii Becca | 0.22 | EFB2_01569 | | HTH-type transcriptional regulator HdfR | 0.19 | EFB2_03466 | | Deaminated glutathione amidase | low | > 86 |
| Escherichia coli BW25113 | 0.22 | b2289 | lrhA | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes (NCBI) | 0.12 | b0219 | yafV | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.22 | HEPCGN_22035 | lrhA | transcriptional regulator LrhA | 0.19 | HEPCGN_00865 | tatE | deaminated glutathione amidase | low | > 87 |
| Escherichia coli ECRC99 | 0.22 | KEDOAH_05365 | lrhA | transcriptional regulator LrhA | 0.19 | KEDOAH_20560 | tatE | deaminated glutathione amidase | — | — |
| Escherichia coli ECRC100 | 0.22 | OKFHMN_22830 | lrhA | transcriptional regulator LrhA | 0.19 | OKFHMN_07410 | tatE | deaminated glutathione amidase | low | > 80 |
| Escherichia coli ECRC62 | 0.22 | BNILDI_13370 | lrhA | transcriptional regulator LrhA | 0.20 | BNILDI_21795 | tatE | deaminated glutathione amidase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.22 | OHPLBJKB_01416 | | HTH-type transcriptional regulator HdfR | 0.19 | OHPLBJKB_03080 | | Deaminated glutathione amidase | low | > 73 |
| Escherichia coli ECRC98 | 0.22 | JDDGAC_26795 | lrhA | transcriptional regulator LrhA | 0.19 | JDDGAC_11055 | tatE | deaminated glutathione amidase | low | > 86 |
| Escherichia coli ECRC101 | 0.22 | MCAODC_13870 | lrhA | transcriptional regulator LrhA | 0.19 | MCAODC_26625 | tatE | deaminated glutathione amidase | low | > 87 |
| Rahnella sp. WP5 | 0.22 | EX31_RS19440 | | transcriptional regulator LrhA | 0.19 | EX31_RS23065 | | deaminated glutathione amidase | low | > 89 |
| Sphingomonas koreensis DSMZ 15582 | 0.22 | Ga0059261_3000 | | Transcriptional regulator | 0.35 | Ga0059261_3603 | | Predicted amidohydrolase | low | > 68 |
| Escherichia coli Nissle 1917 | 0.21 | ECOLIN_RS13290 | | transcriptional regulator LrhA | 0.19 | ECOLIN_RS03410 | | deaminated glutathione amidase | — | — |
| Variovorax sp. OAS795 | 0.21 | ABID97_RS22410 | | LysR substrate-binding domain-containing protein | 0.49 | ABID97_RS02000 | | carbon-nitrogen hydrolase family protein | low | > 91 |
Not shown: 0 genomes with orthologs for HSERO_RS17670 only; 23 genomes with orthologs for HSERO_RS07150 only