| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dickeya dianthicola 67-19 | 1.0 | HGI48_RS21430 | | F0F1 ATP synthase subunit epsilon | 1.0 | HGI48_RS10160 | | MurR/RpiR family transcriptional regulator | 0.67 | 10 |
| Dickeya dianthicola ME23 | 1.00 | DZA65_RS22410 | | F0F1 ATP synthase subunit epsilon | 1.00 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Dickeya dadantii 3937 | 1.00 | DDA3937_RS21555 | | F0F1 ATP synthase subunit epsilon | 1.00 | DDA3937_RS10130 | | MurR/RpiR family transcriptional regulator | — | — |
| Pectobacterium carotovorum WPP14 | 0.96 | HER17_RS21650 | | F0F1 ATP synthase subunit epsilon | 0.91 | HER17_RS11785 | | MurR/RpiR family transcriptional regulator | — | — |
| Serratia liquefaciens MT49 | 0.92 | IAI46_25160 | | F0F1 ATP synthase subunit epsilon | 0.86 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.92 | GFF1727 | | ATP synthase epsilon chain (EC 3.6.3.14) | 0.78 | GFF1632 | | Phosphogluconate repressor HexR, RpiR family | — | — |
| Klebsiella michiganensis M5al | 0.91 | BWI76_RS00180 | | F0F1 ATP synthase subunit epsilon | 0.78 | BWI76_RS18110 | | transcriptional regulator HexR | low | > 92 |
| Escherichia coli ECRC99 | 0.91 | KEDOAH_13315 | atpC | F0F1 ATP synthase subunit epsilon | 0.80 | KEDOAH_01780 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.91 | OHPLBJKB_04322 | | ATP synthase epsilon chain | 0.80 | OHPLBJKB_01875 | | HTH-type transcriptional regulator HexR | — | — |
| Escherichia coli BL21 | 0.91 | ECD_03615 | | F1 sector of membrane-bound ATP synthase, epsilon subunit | 0.80 | ECD_01824 | | putative DNA-binding transcriptional regulator | — | — |
| Escherichia coli ECRC98 | 0.91 | JDDGAC_18455 | atpC | F0F1 ATP synthase subunit epsilon | 0.80 | JDDGAC_00900 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECOR38 | 0.91 | HEPCGN_13550 | atpC | F0F1 ATP synthase subunit epsilon | 0.80 | HEPCGN_04730 | hexR | DNA-binding transcriptional regulator HexR | low | > 87 |
| Escherichia fergusonii Becca | 0.91 | EFB2_04902 | | ATP synthase epsilon chain | 0.80 | EFB2_02089 | | HTH-type transcriptional regulator HexR | low | > 86 |
| Escherichia coli ECRC101 | 0.91 | MCAODC_05340 | atpC | F0F1 ATP synthase subunit epsilon | 0.80 | MCAODC_19080 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli Nissle 1917 | 0.91 | ECOLIN_RS25860 | | F0F1 ATP synthase subunit epsilon | 0.80 | ECOLIN_RS10325 | | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC62 | 0.91 | BNILDI_04555 | atpC | F0F1 ATP synthase subunit epsilon | 0.80 | BNILDI_15635 | hexR | DNA-binding transcriptional regulator HexR | low | > 75 |
| Escherichia coli BW25113 | 0.91 | b3731 | atpC | F0F1 ATP synthase subunit epsilon (NCBI) | 0.80 | b1853 | yebK | predicted DNA-binding transcriptional regulator (NCBI) | — | — |
| Escherichia coli ECOR27 | 0.91 | NOLOHH_06970 | atpC | F0F1 ATP synthase subunit epsilon | 0.80 | NOLOHH_16840 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC100 | 0.91 | OKFHMN_14835 | atpC | F0F1 ATP synthase subunit epsilon | 0.80 | OKFHMN_26325 | hexR | DNA-binding transcriptional regulator HexR | low | > 80 |
| Enterobacter sp. TBS_079 | 0.90 | MPMX20_04636 | | ATP synthase epsilon chain | 0.79 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | — | — |
| Enterobacter asburiae PDN3 | 0.90 | EX28DRAFT_4007 | | ATP synthase, F1 epsilon subunit (delta in mitochondria) | 0.79 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | — | — |
| Rahnella sp. WP5 | 0.90 | EX31_RS06090 | | F0F1 ATP synthase subunit epsilon | 0.84 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | — | — |
| Pantoea sp. MT58 | 0.90 | IAI47_00250 | | F0F1 ATP synthase subunit epsilon | 0.66 | IAI47_08490 | | MurR/RpiR family transcriptional regulator | — | — |
| Escherichia coli ECRC102 | 0.90 | NIAGMN_12590 | atpC | F0F1 ATP synthase subunit epsilon | 0.80 | NIAGMN_01735 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Erwinia tracheiphila SCR3 | 0.87 | LU632_RS24765 | atpC | F0F1 ATP synthase subunit epsilon | 0.69 | LU632_RS13365 | | MurR/RpiR family transcriptional regulator | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.77 | CSW01_13995 | | ATP synthase epsilon chain | 0.74 | CSW01_05825 | | transcriptional regulator HexR | — | — |
| Alteromonas macleodii MIT1002 | 0.65 | MIT1002_04112 | | F-ATPase epsilon subunit | 0.73 | MIT1002_02408 | | putative HTH-type transcriptional regulator YbbH | — | — |
| Shewanella amazonensis SB2B | 0.63 | Sama_3643 | atpC | F0F1 ATP synthase subunit epsilon (RefSeq) | 0.77 | Sama_1813 | | DNA-binding transcriptional regulator HexR (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.61 | SO4746 | atpC | ATP synthase F1, epsilon subunit (NCBI ptt file) | 0.76 | SO2490 | | transcriptional regulator, RpiR family (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_4129 | atpC | F0F1 ATP synthase subunit epsilon (RefSeq) | 0.76 | Shewana3_2152 | | DNA-binding transcriptional regulator HexR (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.57 | Shew_3844 | | F0F1 ATP synthase subunit epsilon (RefSeq) | 0.77 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS29280 | | F0F1 ATP synthase subunit epsilon | 0.33 | QEN71_RS26925 | | MurR/RpiR family transcriptional regulator | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_02397 | | ATP synthase F1 subcomplex epsilon subunit | 0.35 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | — | — |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS19380 | | ATP synthase epsilon chain | 0.35 | BPHYT_RS16740 | | transcriptional regulator | — | — |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_000250 | | F-type H+-transporting ATPase subunit epsilon | 0.35 | ABIE53_003518 | | RpiR family carbohydrate utilization transcriptional regulator | — | — |
| Marinobacter adhaerens HP15 | 0.55 | HP15_3678 | | ATP synthase epsilon chain | 0.56 | HP15_2180 | | transcriptional regulator, RpiR family protein | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF2946 | | ATP synthase epsilon chain (EC 3.6.3.14) | 0.35 | GFF1364 | | Phosphogluconate repressor HexR, RpiR family | — | — |
| Ralstonia solanacearum GMI1000 | 0.54 | RS_RS16615 | | ATP synthase epsilon chain 1 | 0.23 | RS_RS24600 | | MurR/RpiR family transcriptional regulator | — | — |
| Ralstonia solanacearum UW163 | 0.53 | UW163_RS04805 | | F0F1 ATP synthase subunit epsilon | 0.21 | UW163_RS17145 | | MurR/RpiR family transcriptional regulator | — | — |
| Ralstonia solanacearum PSI07 | 0.53 | RPSI07_RS08470 | | F0F1 ATP synthase subunit epsilon | 0.21 | RPSI07_RS07300 | | MurR/RpiR family transcriptional regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS08805 | | F0F1 ATP synthase subunit epsilon | 0.21 | RALBFv3_RS16405 | | MurR/RpiR family transcriptional regulator | — | — |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_2092 | | ATP synthase epsilon chain (EC 3.6.3.14) | 0.34 | Ac3H11_2055 | | Probable transcriptional regulator | — | — |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS04065 | | F0F1 ATP synthase subunit epsilon | 0.21 | ABZR87_RS22900 | | MurR/RpiR family transcriptional regulator | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS20155 | | ATP synthase F0F1 subunit epsilon | 0.34 | RR42_RS06120 | | transcriptional regulator | — | — |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS00445 | | F0F1 ATP synthase subunit epsilon | 0.22 | ABID97_RS22860 | | MurR/RpiR family transcriptional regulator | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_683 | | ATP synthase epsilon chain (EC 3.6.3.14) | 0.55 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | — | — |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS21800 | | F0F1 ATP synthase subunit epsilon | 0.34 | HSERO_RS05505 | | transcriptional regulator | — | — |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS10325 | | F0F1 ATP synthase subunit epsilon | 0.39 | ABCV34_RS08655 | | SIS domain-containing protein | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_1944 | | ATP synthase epsilon chain (EC 3.6.3.14) | 0.54 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | — | — |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS30115 | | F0F1 ATP synthase subunit epsilon | 0.54 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | — | — |
| Variovorax sp. SCN45 | 0.47 | GFF3688 | | ATP synthase epsilon chain (EC 3.6.3.14) | 0.21 | GFF6715 | | Transcriptional regulator of RpiR family in catabolic operon | — | — |
| Pseudomonas putida KT2440 | 0.47 | PP_5412 | | ATP synthase epsilon chain | 0.55 | PP_1021 | | DNA-binding transcriptional regulator | — | — |
| Pseudomonas sp. RS175 | 0.47 | PFR28_04575 | | ATP synthase epsilon chain | 0.55 | PFR28_00572 | | HTH-type transcriptional regulator HexR | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS30115 | | F0F1 ATP synthase subunit epsilon | 0.54 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | — | — |
| Pseudomonas simiae WCS417 | 0.46 | PS417_28460 | | ATP synthase F0F1 subunit epsilon | 0.54 | PS417_22115 | | transcriptional regulator | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_4214 | | ATP synthase epsilon chain (EC 3.6.3.14) | 0.55 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_11725 | | ATP synthase F0F1 subunit epsilon | 0.55 | AO356_05165 | | transcriptional regulator | — | — |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_15975 | atpC | F0F1 ATP synthase subunit epsilon | 0.11 | OKGIIK_12345 | rpiR | transcriptional regulator | — | — |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_4353 | | ATP synthase, F1 epsilon subunit (delta in mitochondria) | 0.54 | Psest_0851 | | Transcriptional regulators | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS13600 | | F0F1 ATP synthase subunit epsilon | 0.12 | ABZR86_RS12100 | | MurR/RpiR family transcriptional regulator | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_5120 | | ATP synthase F1 subcomplex epsilon subunit | 0.54 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_5120 | | ATP synthase F1 subcomplex epsilon subunit | 0.54 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.45 | AO353_10385 | | ATP synthase F0F1 subunit epsilon | 0.55 | AO353_03365 | | transcriptional regulator | — | — |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS09365 | | F0F1 ATP synthase subunit epsilon | 0.11 | LRK55_RS11245 | | MurR/RpiR family transcriptional regulator | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS09705 | | F0F1 ATP synthase subunit epsilon | 0.11 | LRK54_RS11515 | | MurR/RpiR family transcriptional regulator | — | — |
| Lysobacter sp. OAE881 | 0.42 | ABIE51_RS18365 | | F0F1 ATP synthase subunit epsilon | 0.12 | ABIE51_RS13700 | | MurR/RpiR family transcriptional regulator | — | — |
| Pseudomonas sp. S08-1 | 0.42 | OH686_12720 | | ATP synthase F1, epsilon subunit | 0.55 | OH686_02440 | | Phosphogluconate repressor HexR, RpiR family | — | — |
| Azospirillum sp. SherDot2 | 0.25 | MPMX19_02100 | | ATP synthase epsilon chain | 0.32 | MPMX19_06075 | | HTH-type transcriptional regulator HexR | — | — |
| Azospirillum brasilense Sp245 | 0.25 | AZOBR_RS04015 | | ATP synthase subunit epsilon | 0.36 | AZOBR_RS30190 | | transcriptional regulator | — | — |
Not shown: 11 genomes with orthologs for HGI48_RS21430 only; 4 genomes with orthologs for HGI48_RS10160 only