Conservation of cofitness between HER17_RS20085 and HER17_RS20855 in Pectobacterium carotovorum WPP14

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20085 nucleoside diphosphate kinase regulator 1.0 HER17_RS20855 ribonuclease PH 0.66 8
Serratia liquefaciens MT49 0.84 IAI46_22555 nucleoside diphosphate kinase regulator 0.90 IAI46_24850 ribonuclease PH low > 86
Dickeya dadantii 3937 0.83 DDA3937_RS01505 nucleoside diphosphate kinase regulator 0.92 DDA3937_RS20540 ribonuclease PH low > 74
Dickeya dianthicola ME23 0.82 DZA65_RS01485 nucleoside diphosphate kinase regulator 0.93 DZA65_RS00730 ribonuclease PH low > 75
Dickeya dianthicola 67-19 0.82 HGI48_RS01420 nucleoside diphosphate kinase regulator 0.93 HGI48_RS00675 ribonuclease PH low > 71
Rahnella sp. WP5 0.73 EX31_RS12330 nucleoside diphosphate kinase regulator 0.87 EX31_RS14505 ribonuclease PH low > 89
Klebsiella michiganensis M5al 0.68 BWI76_RS07955 nucleoside diphosphate kinase regulator 0.86 BWI76_RS27390 ribonuclease PH low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4522 Regulator of nucleoside diphosphate kinase 0.87 GFF366 Ribonuclease PH (EC 2.7.7.56) low > 78
Escherichia coli ECRC99 0.60 KEDOAH_20485 rnk nucleoside diphosphate kinase regulator 0.85 KEDOAH_12555 rph ribonuclease PH — —
Escherichia coli ECOR27 0.60 NOLOHH_23860 rnk nucleoside diphosphate kinase regulator 0.85 NOLOHH_07470 rph ribonuclease PH low > 75
Escherichia coli BW25113 0.60 b0610 rnk nucleoside diphosphate kinase regulator (NCBI) 0.81 b3643 rph ribonuclease PH (NCBI) low > 76
Escherichia coli ECRC101 0.60 MCAODC_26700 rnk nucleoside diphosphate kinase regulator 0.85 MCAODC_06100 rph ribonuclease PH low > 87
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03335 nucleoside diphosphate kinase regulator 0.85 ECOLIN_RS20755 ribonuclease PH — —
Escherichia coli ECRC100 0.60 OKFHMN_07485 rnk nucleoside diphosphate kinase regulator 0.85 OKFHMN_15590 rph ribonuclease PH — —
Escherichia coli BL21 0.60 ECD_00578 regulator of nucleoside diphosphate kinase 0.85 ECD_03500 ribonuclease PH — —
Escherichia coli ECRC98 0.60 JDDGAC_11130 rnk nucleoside diphosphate kinase regulator 0.85 JDDGAC_19215 rph ribonuclease PH low > 86
Escherichia coli ECRC102 0.60 NIAGMN_05540 rnk nucleoside diphosphate kinase regulator 0.85 NIAGMN_13350 rph ribonuclease PH — —
Escherichia fergusonii Becca 0.60 EFB2_03482 Regulator of nucleoside diphosphate kinase 0.85 EFB2_00170 Ribonuclease PH low > 86
Escherichia coli ECOR38 0.60 HEPCGN_00790 rnk nucleoside diphosphate kinase regulator 0.85 HEPCGN_14410 rph ribonuclease PH — —
Escherichia coli ECRC62 0.60 BNILDI_21870 rnk nucleoside diphosphate kinase regulator 0.85 BNILDI_04045 rph ribonuclease PH low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03095 Regulator of nucleoside diphosphate kinase 0.85 OHPLBJKB_00059 Ribonuclease PH low > 73
Enterobacter sp. TBS_079 0.60 MPMX20_01276 Regulator of nucleoside diphosphate kinase 0.86 MPMX20_00092 Ribonuclease PH low > 85
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2346 Transcription elongation factor 0.87 EX28DRAFT_3893 ribonuclease PH — —
Rhodanobacter denitrificans MT42 0.48 LRK55_RS17655 nucleoside diphosphate kinase regulator 0.59 LRK55_RS11470 ribonuclease PH low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS17435 nucleoside diphosphate kinase regulator 0.59 LRK54_RS11745 ribonuclease PH low > 59
Lysobacter sp. OAE881 0.48 ABIE51_RS07025 nucleoside diphosphate kinase regulator 0.63 ABIE51_RS17285 ribonuclease PH — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_07510 rnk nucleoside diphosphate kinase regulator 0.59 OKGIIK_12150 rph ribonuclease PH — —
Shewanella oneidensis MR-1 0.43 SO1935 rnk regulator of nucleoside diphosphate kinase (NCBI ptt file) 0.75 SO4256 rph ribonuclease PH (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3182 Regulator of nucleoside diphosphate kinase 0.62 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) — —
Shewanella amazonensis SB2B 0.42 Sama_1433 GreA/GreB family elongation factor (RefSeq) 0.75 Sama_0320 tRNA nucleotidyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.42 Shewana3_1714 GreA/GreB family elongation factor (RefSeq) 0.76 Shewana3_3777 RNAse PH (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.4225.1 Regulator of nucleoside diphosphate kinase 0.65 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) low > 74
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_17255 nucleoside diphosphate kinase regulator 0.79 CSW01_01115 ribonuclease PH low > 62
Pseudomonas sp. S08-1 0.37 OH686_13825 Regulator of nucleoside diphosphate kinase 0.70 OH686_13570 ribonuclease PH low > 80
Pseudomonas sp. RS175 0.37 PFR28_04372 Regulator of nucleoside diphosphate kinase 0.68 PFR28_04420 Ribonuclease PH low > 88
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_12755 nucleoside diphosphate kinase regulator 0.68 AO356_12500 ribonuclease PH low > 104
Pseudomonas putida KT2440 0.37 PP_5223 regulator of nucleotide diphosphokinase 0.68 PP_5294 Ribonuclease PH low > 96
Pseudomonas stutzeri RCH2 0.36 Psest_3761 Transcription elongation factor 0.68 Psest_3813 ribonuclease PH low > 67
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0178 regulator of nucleoside diphosphate kinase 0.68 Psyr_0213 RNAse PH low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0178 regulator of nucleoside diphosphate kinase 0.68 Psyr_0213 RNAse PH low > 86
Pseudomonas fluorescens SBW25 0.35 PFLU_RS29245 nucleoside diphosphate kinase regulator 0.67 PFLU_RS29490 ribonuclease PH low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS29245 nucleoside diphosphate kinase regulator 0.67 PFLU_RS29490 ribonuclease PH low > 109
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2178 Regulator of nucleoside diphosphate kinase 0.68 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) low > 87
Variovorax sp. SCN45 0.35 GFF1183 Regulator of nucleoside diphosphate kinase 0.64 GFF2381 Ribonuclease PH (EC 2.7.7.56) — —
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_849 Regulator of nucleoside diphosphate kinase 0.68 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.27 53
Pseudomonas simiae WCS417 0.34 PS417_27565 nucleoside diphosphate kinase regulator 0.67 PS417_27810 ribonuclease PH — —
Acinetobacter radioresistens SK82 0.34 MPMX26_02046 Regulator of nucleoside diphosphate kinase 0.63 MPMX26_00040 Ribonuclease PH low > 36
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_09025 nucleoside diphosphate kinase regulator 0.68 AO353_09260 ribonuclease PH low > 101
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF3632 Regulator of nucleoside diphosphate kinase 0.65 GFF3254 Ribonuclease PH (EC 2.7.7.56) low > 90
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4424 Regulator of nucleoside diphosphate kinase 0.68 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) low > 103
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS19895 elongation factor GreAB 0.61 RR42_RS04890 ribonuclease PH low > 128
Rhodospirillum rubrum S1H 0.32 Rru_A0942 GreA/GreB family elongation factor (NCBI) 0.55 Rru_A3641 Ribonuclease PH (NCBI) — —
Variovorax sp. OAS795 0.32 ABID97_RS29100 GreA/GreB family elongation factor 0.63 ABID97_RS23640 ribonuclease PH low > 91
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS00985 nucleoside diphosphate kinase regulator 0.63 ABZR87_RS15255 ribonuclease PH low > 80
Azospirillum sp. SherDot2 0.29 MPMX19_05503 Regulator of nucleoside diphosphate kinase 0.55 MPMX19_02576 Ribonuclease PH low > 112
Ralstonia solanacearum PSI07 0.29 RPSI07_RS11955 nucleoside diphosphate kinase regulator 0.63 RPSI07_RS13840 ribonuclease PH — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS05345 elongation factor GreAB 0.62 RALBFv3_RS03345 ribonuclease PH low > 76
Ralstonia solanacearum UW163 0.29 UW163_RS08280 elongation factor GreAB 0.62 UW163_RS10375 ribonuclease PH — —
Rhodopseudomonas palustris CGA009 0.29 TX73_004465 nucleoside diphosphate kinase regulator 0.59 TX73_001710 ribonuclease PH low > 86
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_00397 GreA/GreB family elongation factor 0.63 H281DRAFT_04008 RNAse PH low > 103
Ralstonia solanacearum GMI1000 0.29 RS_RS13210 nucleoside diphosphate kinase regulator 0.63 RS_RS10830 ribonuclease PH — —
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS13215 elongation factor GreAB 0.63 BPHYT_RS15325 ribonuclease PH — —
Dinoroseobacter shibae DFL-12 0.27 Dshi_0557 GreA/GreB family elongation factor (RefSeq) 0.56 Dshi_3463 ribonuclease PH (RefSeq) low > 64
Dechlorosoma suillum PS 0.27 Dsui_0102 transcription elongation factor 0.66 Dsui_0494 ribonuclease PH low > 51
Sinorhizobium meliloti 1021 0.24 SMc00347 nucleoside diphosphate kinase regulator 0.59 SMc01144 ribonuclease PH 0.29 23
Azospirillum brasilense Sp245 0.23 AZOBR_RS06945 GreA/GreB family elongation factor 0.59 AZOBR_RS02205 ribonuclease PH low > 97
Alteromonas macleodii MIT1002 0.22 MIT1002_03243 Regulator of nucleoside diphosphate kinase 0.76 MIT1002_04071 Ribonuclease PH low > 70
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_3606 Transcription elongation factor 0.52 Ga0059261_2741 ribonuclease PH — —

Not shown: 1 genomes with orthologs for HER17_RS20085 only; 21 genomes with orthologs for HER17_RS20855 only