Conservation of cofitness between GFF1679 and GFF633 in Sphingobium sp. HT1-2

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF1679 Cysteine desulfurase (EC 2.8.1.7) 1.0 GFF633 Homoserine dehydrogenase (EC 1.1.1.3) 0.73 31
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_3768 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 0.63 Ga0059261_2711 homoserine dehydrogenase (EC 1.1.1.3) (from data) — —
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS06025 cysteine desulfurase 0.36 RR42_RS12540 homoserine dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS15770 cysteine desulfurase 0.38 HSERO_RS10460 homoserine dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00478 cysteine desulfurase IscS 0.35 H281DRAFT_00810 homoserine dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS05785 IscS subfamily cysteine desulfurase 0.35 QEN71_RS22405 homoserine dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS09980 IscS subfamily cysteine desulfurase 0.34 ABZR87_RS11445 homoserine dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.37 AMB_RS15255 IscS subfamily cysteine desulfurase 0.41 AMB_RS18865 homoserine dehydrogenase — —
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS12780 cysteine desulfurase 0.35 BPHYT_RS08955 homoserine dehydrogenase — —
Paraburkholderia graminis OAS925 0.37 ABIE53_002781 cysteine desulfurase 0.35 ABIE53_002026 homoserine dehydrogenase — —
Dechlorosoma suillum PS 0.37 Dsui_2371 cysteine desulfurase IscS 0.38 Dsui_2907 homoserine dehydrogenase — —
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_2558 nifS cysteine desulfurase NifS 0.33 Synpcc7942_2090 thrA homoserine dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS14265 IscS subfamily cysteine desulfurase 0.33 RALBFv3_RS15875 homoserine dehydrogenase — —
Ralstonia solanacearum UW163 0.36 UW163_RS11730 IscS subfamily cysteine desulfurase 0.33 UW163_RS13320 homoserine dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF4960 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily 0.36 GFF3935 Homoserine dehydrogenase (EC 1.1.1.3) — —
Methylophilus sp. DMC18 0.36 GFF432 Cysteine desulfurase IscS 0.38 GFF1163 Homoserine dehydrogenase — —
Ralstonia solanacearum GMI1000 0.36 RS_RS05045 IscS subfamily cysteine desulfurase 0.32 RS_RS06655 homoserine dehydrogenase — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS19200 IscS subfamily cysteine desulfurase 0.34 RPSI07_RS17490 homoserine dehydrogenase — —
Variovorax sp. SCN45 0.35 GFF947 Cysteine desulfurase (EC 2.8.1.7) => IscS 0.37 GFF2801 Homoserine dehydrogenase (EC 1.1.1.3) — —
Variovorax sp. OAS795 0.35 ABID97_RS14005 IscS subfamily cysteine desulfurase 0.37 ABID97_RS10890 homoserine dehydrogenase — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_4112 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily 0.37 Ac3H11_1507 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_865 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily 0.37 Pf1N1B4_3013 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_4873 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily 0.38 PfGW456L13_1723 Homoserine dehydrogenase (EC 1.1.1.3) — —
Rhodospirillum rubrum S1H 0.33 Rru_A1068 Aminotransferase, class V (NCBI) 0.52 Rru_A2410 Homoserine dehydrogenase (NCBI) low > 58
Pseudomonas stutzeri RCH2 0.33 Psest_1251 cysteine desulfurase IscS 0.38 Psest_3126 Homoserine dehydrogenase — —
Pseudomonas segetis P6 0.33 ACVTMO_RS07465 IscS subfamily cysteine desulfurase 0.38 ACVTMO_RS07805 homoserine dehydrogenase — —
Pseudomonas sp. DMC3 0.33 GFF4350 Cysteine desulfurase IscS 0.38 GFF1989 Homoserine dehydrogenase — —
Azospirillum sp. SherDot2 0.33 MPMX19_04963 Cysteine desulfurase IscS 0.51 MPMX19_00805 Homoserine dehydrogenase — —
Pseudomonas aeruginosa PA14 0.33 IKLFDK_19640 IscS subfamily cysteine desulfurase 0.38 IKLFDK_19075 Homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_15835 cysteine desulfurase IscS 0.37 AO353_04355 homoserine dehydrogenase — —
Pseudomonas aeruginosa PUPa3 0.33 DQ20_RS43250 IscS subfamily cysteine desulfurase 0.38 DQ20_RS42835 homoserine dehydrogenase — —
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS13850 IscS subfamily cysteine desulfurase 0.38 DY961_RS14290 homoserine dehydrogenase — —
Pseudomonas sp. S08-1 0.33 OH686_17475 cysteine desulfurase IscS 0.38 OH686_17760 Homoserine dehydrogenase — —
Castellaniella sp019104865 MT123 0.32 ABCV34_RS05095 IscS subfamily cysteine desulfurase 0.36 ABCV34_RS02295 homoserine dehydrogenase — —
Pseudomonas sp. RS175 0.32 PFR28_00286 Cysteine desulfurase IscS 0.38 PFR28_00333 Homoserine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_1237 cysteine desulfurase IscS 0.38 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_1237 cysteine desulfurase IscS 0.38 Psyr_1290 homoserine dehydrogenase — —
Synechocystis sp000284455 PCC 6803 0.32 SGL_RS13005 cysteine desulfurase family protein 0.34 SGL_RS14120 homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3189 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily 0.38 Pf6N2E2_3143 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas simiae WCS417 0.32 PS417_23200 cysteine desulfurase 0.38 PS417_22885 homoserine dehydrogenase — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS24855 IscS subfamily cysteine desulfurase 0.38 PFLU_RS24550 homoserine dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS24855 IscS subfamily cysteine desulfurase 0.38 PFLU_RS24550 homoserine dehydrogenase — —
Pseudomonas sp. BP01 0.32 JOY50_RS22820 IscS subfamily cysteine desulfurase 0.38 JOY50_RS11710 homoserine dehydrogenase — —
Pseudomonas putida KT2440 0.32 PP_0842 cysteine desulfurase 0.38 PP_1470 Homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_06645 cysteine desulfurase IscS 0.38 AO356_06375 homoserine dehydrogenase — —
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_04792 Cysteine desulfurase IscS 0.38 GEMAOFIL_04727 Homoserine dehydrogenase — —
Pseudomonas orientalis W4I3 0.32 QF045_RS25420 IscS subfamily cysteine desulfurase 0.38 QF045_RS25075 homoserine dehydrogenase — —
Pseudomonas sp. SVBP6 0.32 COO64_RS03895 IscS subfamily cysteine desulfurase 0.38 COO64_RS04935 homoserine dehydrogenase — —
Marinobacter adhaerens HP15 0.31 HP15_1488 cysteine desulfurase IscS 0.39 HP15_764 homoserine dehydrogenase — —
Acinetobacter baumannii LAC-4 0.30 RR41_RS12345 IscS subfamily cysteine desulfurase 0.37 RR41_RS17775 homoserine dehydrogenase — —
Acinetobacter radioresistens SK82 0.30 MPMX26_01327 Cysteine desulfurase IscS 0.33 MPMX26_00167 Homoserine dehydrogenase — —
Azospirillum brasilense Sp245 0.30 AZOBR_RS05500 cysteine desulfurase 0.52 AZOBR_RS07835 homoserine dehydrogenase — —
Xanthobacter sp. DMC5 0.30 GFF4861 Cysteine desulfurase NifS 0.40 GFF1323 Homoserine dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.28 TX73_023935 cysteine desulfurase NifS 0.38 TX73_012940 homoserine dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.27 DVU0664 cysteine desulfurase (TIGR) 0.33 DVU0890 hom homoserine dehydrogenase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_2659 cysteine desulfurase NifS (RefSeq) 0.30 DvMF_1412 homoserine dehydrogenase (EC 1.1.1.3) (from data) low > 51
Mycobacterium tuberculosis H37Rv 0.25 Rv3025c Cysteine desulfurase IscS (NIFS protein homolog) (nitrogenase metalloclusters biosynthesis protein NIFS) 0.28 Rv1294 Probable homoserine dehydrogenase ThrA — —
Sinorhizobium meliloti 1021 0.23 SMc00529 pyridoxal-phosphate-dependent aminotransferase 0.44 SMc00293 homoserine dehydrogenase — —
Rhizobium sp. OAE497 0.23 ABIE40_RS10010 cysteine desulfurase family protein 0.42 ABIE40_RS08650 homoserine dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_01941 cysteine desulfhydrase/Selenocysteine lyase 0.36 CCNA_01447 homoserine dehydrogenase — —
Caulobacter crescentus NA1000 0.22 CCNA_01941 cysteine desulfhydrase/Selenocysteine lyase 0.36 CCNA_01447 homoserine dehydrogenase — —
Bifidobacterium breve UCC2003 0.22 BBR_RS16715 cysteine desulfurase 0.29 BBR_RS19540 homoserine dehydrogenase low > 34
Agrobacterium fabrum C58 0.22 Atu1825 cysteine desulfurase 0.43 Atu1588 homoserine dehydrogenase — —

Not shown: 43 genomes with orthologs for GFF1679 only; 3 genomes with orthologs for GFF633 only